RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 FAM25EA8MYX2 175 aa9.32□□□□□ -0.92
APOC1-209ENST00000592885 S100A11P31949 105 aa9.32□□□□□ -0.92
APOC1-209ENST00000592885 LEPP41159 167 aa9.32□□□□□ -0.92
APOC1-209ENST00000592885 RPL29P47914 159 aaKnown RBP9.32□□□□□ -0.92
APOC1-209ENST00000592885 SULT1A1P50225 295 aa9.32□□□□□ -0.92
APOC1-209ENST00000592885 CCL18P55774 89 aa9.32□□□□□ -0.92
APOC1-209ENST00000592885 HBG1P69891 147 aa9.32□□□□□ -0.92
APOC1-209ENST00000592885 HBG2P69892 147 aa9.32□□□□□ -0.92
APOC1-209ENST00000592885 STX12Q86Y82 276 aa9.32□□□□□ -0.92
APOC1-209ENST00000592885 CCDC28AQ8IWP9 274 aa9.32□□□□□ -0.92
APOC1-209ENST00000592885 C12orf45Q8N5I9 185 aaPredicted RBP9.32□□□□□ -0.92
APOC1-209ENST00000592885 CHAC2Q8WUX2 184 aa9.32□□□□□ -0.92
APOC1-209ENST00000592885 MRPL53Q96EL3 112 aaKnown RBP9.32□□□□□ -0.92
APOC1-209ENST00000592885 SAT2Q96F10 170 aaPredicted RBP9.32□□□□□ -0.92
APOC1-209ENST00000592885 LYRM2Q9NU23 88 aaPredicted RBP9.32□□□□□ -0.92
APOC1-209ENST00000592885 KIAA1109Q2LD37 5005 aa9.31□□□□□ -0.92
APOC1-209ENST00000592885 PKHD1P08F94 4074 aa9.31□□□□□ -0.92
APOC1-209ENST00000592885 NPIPB6E9PJ23 425 aa9.31□□□□□ -0.92
APOC1-209ENST00000592885 CST7O76096 145 aa9.31□□□□□ -0.92
APOC1-209ENST00000592885 GFI1BQ5VTD9 330 aa9.31□□□□□ -0.92
APOC1-209ENST00000592885 MORN5Q5VZ52 161 aa9.31□□□□□ -0.92
APOC1-209ENST00000592885 MIC13Q5XKP0 118 aa9.31□□□□□ -0.92
APOC1-209ENST00000592885 LINC00299Q6ZSB3 139 aa9.31□□□□□ -0.92
APOC1-209ENST00000592885 LINC00612Q8N6U2 182 aa9.31□□□□□ -0.92
APOC1-209ENST00000592885 SEC22CQ9BRL7 303 aa9.31□□□□□ -0.92
APOC1-209ENST00000592885 UBE2L5PA0A1B0GUS4 154 aa9.3□□□□□ -0.92
APOC1-209ENST00000592885 FAM24AA6NFZ4 105 aa9.3□□□□□ -0.92
APOC1-209ENST00000592885 H3BQ15 152 aa9.3□□□□□ -0.92
APOC1-209ENST00000592885 MPDU1O75352 247 aa9.3□□□□□ -0.92
APOC1-209ENST00000592885 NUDT3O95989 172 aa9.3□□□□□ -0.92
APOC1-209ENST00000592885 HTN1P15515 57 aa9.3□□□□□ -0.92
APOC1-209ENST00000592885 S100A10P60903 97 aa9.3□□□□□ -0.92
APOC1-209ENST00000592885 BAXQ07812 192 aa9.3□□□□□ -0.92
APOC1-209ENST00000592885 FCN2Q15485 313 aa9.3□□□□□ -0.92
APOC1-209ENST00000592885 ATP6V1FQ16864 119 aa9.3□□□□□ -0.92
APOC1-209ENST00000592885 ZNRF2Q8NHG8 242 aa9.3□□□□□ -0.92
APOC1-209ENST00000592885 RNF141Q8WVD5 230 aa9.3□□□□□ -0.92
APOC1-209ENST00000592885 ZNF503Q96F45 646 aa9.3□□□□□ -0.92
APOC1-209ENST00000592885 NOP10Q9NPE3 64 aaKnown RBP9.3□□□□□ -0.92
APOC1-209ENST00000592885 SLC39A9Q9NUM3 307 aa9.3□□□□□ -0.92
APOC1-209ENST00000592885 TMEM14CQ9P0S9 112 aa9.3□□□□□ -0.92
APOC1-209ENST00000592885 NBDYA0A0U1RRE5 68 aa9.29□□□□□ -0.92
APOC1-209ENST00000592885 SNURFLB1AK76 121 aa9.29□□□□□ -0.92
APOC1-209ENST00000592885 PRAC2D3DTV9 90 aa9.29□□□□□ -0.92
APOC1-209ENST00000592885 RLN2P04090 185 aa9.29□□□□□ -0.92
APOC1-209ENST00000592885 H2AFB2P0C5Z0 115 aa9.29□□□□□ -0.92
APOC1-209ENST00000592885 IL15RAQ13261 267 aa9.29□□□□□ -0.92
APOC1-209ENST00000592885 PDE6HQ13956 83 aa9.29□□□□□ -0.92
APOC1-209ENST00000592885 TMEM252Q8N6L7 170 aa9.29□□□□□ -0.92
APOC1-209ENST00000592885 PYGO2Q9BRQ0 406 aa9.29□□□□□ -0.92
APOC1-209ENST00000592885 PRELID1Q9Y255 219 aa9.29□□□□□ -0.92
APOC1-209ENST00000592885 TRBV19A0A075B6N1 114 aa9.28□□□□□ -0.92
APOC1-209ENST00000592885 FAM240BA0A1B0GVZ2 78 aa9.28□□□□□ -0.92
APOC1-209ENST00000592885 IGSF23A1L1A6 192 aa9.28□□□□□ -0.92
APOC1-209ENST00000592885 H3BNG1 76 aa9.28□□□□□ -0.92
APOC1-209ENST00000592885 H3BTX0 84 aa9.28□□□□□ -0.92
APOC1-209ENST00000592885 SNRPCP09234 159 aaKnown RBP9.28□□□□□ -0.92
APOC1-209ENST00000592885 RAB32Q13637 225 aa9.28□□□□□ -0.92
APOC1-209ENST00000592885 CLINT1Q14677 625 aa9.28□□□□□ -0.92
APOC1-209ENST00000592885 MZT2BQ6NZ67 158 aa9.28□□□□□ -0.92
APOC1-209ENST00000592885 ZNF586Q9NXT0 402 aa9.28□□□□□ -0.92
APOC1-209ENST00000592885 DNAH11Q96DT5 4516 aa9.28□□□□□ -0.92
APOC1-209ENST00000592885 TRAV5A0A0B4J249 113 aa9.27□□□□□ -0.93
APOC1-209ENST00000592885 SLC25A5P05141 298 aaKnown RBP9.27□□□□□ -0.93
APOC1-209ENST00000592885 CT45A10P0DMU9 189 aa9.27□□□□□ -0.93
APOC1-209ENST00000592885 HIST1H1EP10412 219 aaKnown RBP9.27□□□□□ -0.93
APOC1-209ENST00000592885 M6PRP20645 277 aa9.27□□□□□ -0.93
APOC1-209ENST00000592885 FGF7P21781 194 aa9.27□□□□□ -0.93
APOC1-209ENST00000592885 DAZ2Q13117 558 aaKnown RBP9.27□□□□□ -0.93
APOC1-209ENST00000592885 KIR3DS1Q14943 382 aa9.27□□□□□ -0.93
APOC1-209ENST00000592885 C6orf223Q8N319 242 aa9.27□□□□□ -0.93
APOC1-209ENST00000592885 ZNF680Q8NEM1 530 aa9.27□□□□□ -0.93
APOC1-209ENST00000592885 GNPNAT1Q96EK6 184 aaPredicted RBP9.27□□□□□ -0.93
APOC1-209ENST00000592885 LINC00467Q9BRT7 94 aa9.27□□□□□ -0.93
APOC1-209ENST00000592885 PARD6GQ9BYG4 376 aaPredicted RBP9.27□□□□□ -0.93
APOC1-209ENST00000592885 LINC00588Q9Y4M8 146 aa9.27□□□□□ -0.93
APOC1-209ENST00000592885 PKD1P98161 4303 aa9.27□□□□□ -0.93
APOC1-209ENST00000592885 PRB4P10163 310 aaPredicted RBP9.26□□□□□ -0.93
APOC1-209ENST00000592885 ASAH1Q13510 395 aa9.26□□□□□ -0.93
APOC1-209ENST00000592885 TTC32Q5I0X7 151 aa9.26□□□□□ -0.93
APOC1-209ENST00000592885 RXFP4Q8TDU9 374 aa9.26□□□□□ -0.93
APOC1-209ENST00000592885 S100ZQ8WXG8 99 aa9.26□□□□□ -0.93
APOC1-209ENST00000592885 C18orf15Q96N68 181 aa9.26□□□□□ -0.93
APOC1-209ENST00000592885 NPCDR1Q9BY65 106 aa9.26□□□□□ -0.93
APOC1-209ENST00000592885 AAMDCQ9H7C9 122 aa9.26□□□□□ -0.93
APOC1-209ENST00000592885 GPN1Q9HCN4 374 aaPredicted RBP9.26□□□□□ -0.93
APOC1-209ENST00000592885 KCNIP2Q9NS61 270 aa9.26□□□□□ -0.93
APOC1-209ENST00000592885 TRAV26-1A0A087WT03 109 aa9.25□□□□□ -0.93
APOC1-209ENST00000592885 TRAV12-3A0A0B4J271 114 aa9.25□□□□□ -0.93
APOC1-209ENST00000592885 C7orf71A4D174 169 aa9.25□□□□□ -0.93
APOC1-209ENST00000592885 KLLNB2CW77 178 aa9.25□□□□□ -0.93
APOC1-209ENST00000592885 OR5I1Q13606 314 aa9.25□□□□□ -0.93
APOC1-209ENST00000592885 SSX7Q7RTT5 188 aa9.25□□□□□ -0.93
APOC1-209ENST00000592885 FAM19A4Q96LR4 140 aa9.25□□□□□ -0.93
APOC1-209ENST00000592885 LINC00477Q96M19 166 aa9.25□□□□□ -0.93
APOC1-209ENST00000592885 UPK3BQ9BT76 320 aa9.25□□□□□ -0.93
APOC1-209ENST00000592885 TIMM9Q9Y5J7 89 aa9.25□□□□□ -0.93
APOC1-209ENST00000592885 GAGE12BA1L429 117 aa9.24□□□□□ -0.93
APOC1-209ENST00000592885 J3KRW8 73 aa9.24□□□□□ -0.93
APOC1-209ENST00000592885 GAGE7O76087 117 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms