RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 ZNF738Q8NE65 137 aa15.74■□□□□ 0.11
R3HDM4-206ENST00000590454 STOML3Q8TAV4 291 aa15.74■□□□□ 0.11
R3HDM4-206ENST00000590454 TMED6Q8WW62 240 aa15.74■□□□□ 0.11
R3HDM4-206ENST00000590454 PHYHIPLQ96FC7 376 aa15.74■□□□□ 0.11
R3HDM4-206ENST00000590454 SLC50A1Q9BRV3 221 aa15.74■□□□□ 0.11
R3HDM4-206ENST00000590454 RETNQ9HD89 108 aa15.74■□□□□ 0.11
R3HDM4-206ENST00000590454 A0A0J9YX75 114 aa15.73■□□□□ 0.11
R3HDM4-206ENST00000590454 PRAC2D3DTV9 90 aa15.73■□□□□ 0.11
R3HDM4-206ENST00000590454 IGKV3-20P01619 116 aa15.73■□□□□ 0.11
R3HDM4-206ENST00000590454 SEC11BP0C7V7 166 aa15.73■□□□□ 0.11
R3HDM4-206ENST00000590454 STAG3L2P0CL84 134 aa15.73■□□□□ 0.11
R3HDM4-206ENST00000590454 STAG3L3P0CL85 134 aa15.73■□□□□ 0.11
R3HDM4-206ENST00000590454 ARL14EPLP0DKL9 152 aa15.73■□□□□ 0.11
R3HDM4-206ENST00000590454 TPT1P13693 172 aaKnown RBP15.73■□□□□ 0.11
R3HDM4-206ENST00000590454 HLA-DRB4P13762 266 aa15.73■□□□□ 0.11
R3HDM4-206ENST00000590454 UBE2L3P68036 154 aaKnown RBP15.73■□□□□ 0.11
R3HDM4-206ENST00000590454 FOXI2Q6ZQN5 318 aa15.73■□□□□ 0.11
R3HDM4-206ENST00000590454 EXOC3-AS1Q8N2X6 119 aa15.73■□□□□ 0.11
R3HDM4-206ENST00000590454 ACTR3CQ9C0K3 210 aaPredicted RBP15.73■□□□□ 0.11
R3HDM4-206ENST00000590454 BOLA1Q9Y3E2 137 aa15.73■□□□□ 0.11
R3HDM4-206ENST00000590454 HLA-DRB4X5D2U9 266 aa15.73■□□□□ 0.11
R3HDM4-206ENST00000590454 ZNF253O75346 499 aa15.72■□□□□ 0.11
R3HDM4-206ENST00000590454 M0R3E3 92 aa15.71■□□□□ 0.11
R3HDM4-206ENST00000590454 GIG44P09565 113 aaPredicted RBP15.71■□□□□ 0.11
R3HDM4-206ENST00000590454 RPUSD4Q96CM3 377 aaKnown RBP15.71■□□□□ 0.11
R3HDM4-206ENST00000590454 C4BPBP20851 252 aa15.7■□□□□ 0.1
R3HDM4-206ENST00000590454 EIF5AP63241 154 aaKnown RBP15.7■□□□□ 0.1
R3HDM4-206ENST00000590454 PDE6HQ13956 83 aa15.7■□□□□ 0.1
R3HDM4-206ENST00000590454 PQLC2Q6ZP29 291 aa15.7■□□□□ 0.1
R3HDM4-206ENST00000590454 CSTL1Q9H114 145 aa15.7■□□□□ 0.1
R3HDM4-206ENST00000590454 CTXND1A0A1B0GTU2 59 aa15.69■□□□□ 0.1
R3HDM4-206ENST00000590454 GCHFRP30047 84 aa15.69■□□□□ 0.1
R3HDM4-206ENST00000590454 APOC4P55056 127 aa15.69■□□□□ 0.1
R3HDM4-206ENST00000590454 RANP62826 216 aaKnown RBP15.69■□□□□ 0.1
R3HDM4-206ENST00000590454 ICAM4Q14773 271 aa15.69■□□□□ 0.1
R3HDM4-206ENST00000590454 EBLN2Q6P2I7 272 aa15.69■□□□□ 0.1
R3HDM4-206ENST00000590454 SLC51BQ86UW2 128 aa15.69■□□□□ 0.1
R3HDM4-206ENST00000590454 OR4B1Q8NGF8 309 aa15.69■□□□□ 0.1
R3HDM4-206ENST00000590454 KIR2DL5BA0A0G2JN68 375 aa15.68■□□□□ 0.1
R3HDM4-206ENST00000590454 KIR2DL5BA0A0G2JPC4 375 aa15.68■□□□□ 0.1
R3HDM4-206ENST00000590454 CNN1P51911 297 aaKnown RBP15.68■□□□□ 0.1
R3HDM4-206ENST00000590454 FGF8P55075 233 aaPredicted RBP15.68■□□□□ 0.1
R3HDM4-206ENST00000590454 FXYD7P58549 80 aa15.68■□□□□ 0.1
R3HDM4-206ENST00000590454 PSG9Q00887 426 aa15.68■□□□□ 0.1
R3HDM4-206ENST00000590454 KIR2DL5AQ8N109 375 aa15.68■□□□□ 0.1
R3HDM4-206ENST00000590454 KIR2DL5BQ8NHK3 375 aa15.68■□□□□ 0.1
R3HDM4-206ENST00000590454 TMPRSS5Q9H3S3 457 aa15.68■□□□□ 0.1
R3HDM4-206ENST00000590454 HIST1H1AQ02539 215 aaPredicted RBP15.67■□□□□ 0.1
R3HDM4-206ENST00000590454 DEFB135Q30KP9 77 aa15.67■□□□□ 0.1
R3HDM4-206ENST00000590454 OR8A1Q8NGG7 326 aa15.67■□□□□ 0.1
R3HDM4-206ENST00000590454 FAM213BQ8TBF2 198 aa15.67■□□□□ 0.1
R3HDM4-206ENST00000590454 Q9H3A6 140 aa15.67■□□□□ 0.1
R3HDM4-206ENST00000590454 BOLA2-SMG1P6H3BVE0 249 aa15.66■□□□□ 0.1
R3HDM4-206ENST00000590454 CXorf1O96002 111 aa15.66■□□□□ 0.1
R3HDM4-206ENST00000590454 CA1P00915 261 aaPredicted RBP15.66■□□□□ 0.1
R3HDM4-206ENST00000590454 AMTNQ6UX39 209 aa15.66■□□□□ 0.1
R3HDM4-206ENST00000590454 SUN5Q8TC36 379 aa15.66■□□□□ 0.1
R3HDM4-206ENST00000590454 SLC35B3Q9H1N7 401 aa15.66■□□□□ 0.1
R3HDM4-206ENST00000590454 MAP1LC3B2A6NCE7 125 aa15.65■□□□□ 0.1
R3HDM4-206ENST00000590454 A8MTW9 85 aa15.65■□□□□ 0.1
R3HDM4-206ENST00000590454 UMAD1C9J7I0 102 aa15.65■□□□□ 0.1
R3HDM4-206ENST00000590454 IQCF2Q8IXL9 164 aa15.65■□□□□ 0.1
R3HDM4-206ENST00000590454 MAP1LC3BQ9GZQ8 125 aa15.65■□□□□ 0.1
R3HDM4-206ENST00000590454 AAMDCQ9H7C9 122 aa15.65■□□□□ 0.1
R3HDM4-206ENST00000590454 CLEC5AQ9NY25 188 aa15.65■□□□□ 0.1
R3HDM4-206ENST00000590454 UBE2CO00762 179 aa15.64■□□□□ 0.09
R3HDM4-206ENST00000590454 FAM74A1Q5RGS3 127 aa15.64■□□□□ 0.09
R3HDM4-206ENST00000590454 MRPL53Q96EL3 112 aaKnown RBP15.64■□□□□ 0.09
R3HDM4-206ENST00000590454 OVOL2Q9BRP0 275 aa15.64■□□□□ 0.09
R3HDM4-206ENST00000590454 IGKV2-40A0A087WW87 121 aaPredicted RBP15.63■□□□□ 0.09
R3HDM4-206ENST00000590454 IGKV2D-40P01614 121 aaPredicted RBP15.63■□□□□ 0.09
R3HDM4-206ENST00000590454 MORN3Q6PF18 240 aaPredicted RBP15.63■□□□□ 0.09
R3HDM4-206ENST00000590454 CLUHP3Q96NS8 147 aa15.63■□□□□ 0.09
R3HDM4-206ENST00000590454 XCL2Q9UBD3 114 aa15.63■□□□□ 0.09
R3HDM4-206ENST00000590454 PRELID1Q9Y255 219 aa15.63■□□□□ 0.09
R3HDM4-206ENST00000590454 A0A1B0GV50 99 aa15.62■□□□□ 0.09
R3HDM4-206ENST00000590454 PGPA6NDG6 321 aa15.62■□□□□ 0.09
R3HDM4-206ENST00000590454 DUSP14O95147 198 aaKnown RBP15.62■□□□□ 0.09
R3HDM4-206ENST00000590454 ERCC8Q13216 396 aa15.62■□□□□ 0.09
R3HDM4-206ENST00000590454 Q6ZWC4 215 aa15.62■□□□□ 0.09
R3HDM4-206ENST00000590454 LYPD1Q8N2G4 141 aa15.62■□□□□ 0.09
R3HDM4-206ENST00000590454 MBD3L1Q8WWY6 194 aa15.62■□□□□ 0.09
R3HDM4-206ENST00000590454 SULT1A2P50226 295 aa15.61■□□□□ 0.09
R3HDM4-206ENST00000590454 DPPA3Q6W0C5 159 aa15.61■□□□□ 0.09
R3HDM4-206ENST00000590454 CSNK1G2-AS1Q8NCQ2 148 aa15.61■□□□□ 0.09
R3HDM4-206ENST00000590454 OR10J6PQ8NGY7 276 aa15.61■□□□□ 0.09
R3HDM4-206ENST00000590454 SFT2D1Q8WV19 159 aa15.61■□□□□ 0.09
R3HDM4-206ENST00000590454 RNF183Q96D59 192 aa15.61■□□□□ 0.09
R3HDM4-206ENST00000590454 OTORQ9NRC9 128 aa15.61■□□□□ 0.09
R3HDM4-206ENST00000590454 TMEM167BQ9NRX6 74 aa15.61■□□□□ 0.09
R3HDM4-206ENST00000590454 YTHDF2Q9Y5A9 579 aaKnown RBP15.61■□□□□ 0.09
R3HDM4-206ENST00000590454 NPIPB6E9PJ23 425 aa15.6■□□□□ 0.09
R3HDM4-206ENST00000590454 M0R2Z0 102 aa15.6■□□□□ 0.09
R3HDM4-206ENST00000590454 SPRY2O43597 315 aa15.6■□□□□ 0.09
R3HDM4-206ENST00000590454 SPINK13Q1W4C9 94 aa15.6■□□□□ 0.09
R3HDM4-206ENST00000590454 EIF5AL1Q6IS14 154 aaKnown RBP15.6■□□□□ 0.09
R3HDM4-206ENST00000590454 ALKAL2Q6UX46 152 aa15.6■□□□□ 0.09
R3HDM4-206ENST00000590454 LINC00476Q8WZB0 136 aa15.6■□□□□ 0.09
R3HDM4-206ENST00000590454 VGLL1Q99990 258 aa15.6■□□□□ 0.09
R3HDM4-206ENST00000590454 PLECQ15149 4684 aaKnown RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 289.5 ms