RNA–Protein interactions for RNA: ENST00000590064.1

APBA3-205, Transcript of amyloid beta precursor protein binding family A member 3, humanhuman

TSL 1 (best)

Gene APBA3, Length 4,250 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3-205ENST00000590064 A0A1B0GXF2 115 aa12.92□□□□□ -0.34
APBA3-205ENST00000590064 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.92□□□□□ -0.34
APBA3-205ENST00000590064 SPATA12Q7Z6I5 190 aa12.92□□□□□ -0.34
APBA3-205ENST00000590064 SCGB3A1Q96QR1 104 aa12.92□□□□□ -0.34
APBA3-205ENST00000590064 TMEM178BH3BS89 294 aa12.92□□□□□ -0.34
APBA3-205ENST00000590064 NPYP01303 97 aa12.92□□□□□ -0.34
APBA3-205ENST00000590064 PSMG4Q5JS54 123 aa12.92□□□□□ -0.34
APBA3-205ENST00000590064 VKORC1Q9BQB6 163 aa12.92□□□□□ -0.34
APBA3-205ENST00000590064 NCOR1P1Q9H4R4 102 aa12.92□□□□□ -0.34
APBA3-205ENST00000590064 C16orf92Q96LL3 132 aa12.91□□□□□ -0.34
APBA3-205ENST00000590064 SHANK2-AS3Q9BTD1 123 aa12.91□□□□□ -0.34
APBA3-205ENST00000590064 TSSC4Q9Y5U2 329 aaPredicted RBP12.91□□□□□ -0.34
APBA3-205ENST00000590064 DPM3Q9P2X0 92 aa12.91□□□□□ -0.34
APBA3-205ENST00000590064 RAXQ9Y2V3 346 aa12.91□□□□□ -0.34
APBA3-205ENST00000590064 C1RLQ9NZP8 487 aa12.91□□□□□ -0.34
APBA3-205ENST00000590064 NBR2O15453 112 aa12.9□□□□□ -0.34
APBA3-205ENST00000590064 GATA4P43694 442 aa12.9□□□□□ -0.34
APBA3-205ENST00000590064 TTTY13Q9BZ97 58 aa12.9□□□□□ -0.34
APBA3-205ENST00000590064 PHLDA3Q9Y5J5 127 aa12.9□□□□□ -0.34
APBA3-205ENST00000590064 GP9P14770 177 aa12.9□□□□□ -0.34
APBA3-205ENST00000590064 CYSLTR1Q9Y271 337 aa12.9□□□□□ -0.34
APBA3-205ENST00000590064 CEP192Q8TEP8 1941 aa12.9□□□□□ -0.35
APBA3-205ENST00000590064 RNASE6Q93091 150 aaKnown RBP12.89□□□□□ -0.35
APBA3-205ENST00000590064 TRAV40A0A0B4J280 105 aa12.89□□□□□ -0.35
APBA3-205ENST00000590064 CCDC144NLQ6NUI1 221 aa12.89□□□□□ -0.35
APBA3-205ENST00000590064 NCKAP5O14513 1909 aa12.89□□□□□ -0.35
APBA3-205ENST00000590064 TMEM75Q8N9X5 138 aa12.89□□□□□ -0.35
APBA3-205ENST00000590064 ARPC1AQ92747 370 aa12.89□□□□□ -0.35
APBA3-205ENST00000590064 TEX48A0A1B0GUV7 120 aa12.88□□□□□ -0.35
APBA3-205ENST00000590064 DLX6P56179 175 aa12.88□□□□□ -0.35
APBA3-205ENST00000590064 KLF12Q9Y4X4 402 aa12.88□□□□□ -0.35
APBA3-205ENST00000590064 ADIPOQQ15848 244 aa12.88□□□□□ -0.35
APBA3-205ENST00000590064 MBD3L4A6NDZ8 208 aaPredicted RBP12.88□□□□□ -0.35
APBA3-205ENST00000590064 MBD3L3A6NE82 208 aaPredicted RBP12.88□□□□□ -0.35
APBA3-205ENST00000590064 MBD3L5A6NJ08 208 aaPredicted RBP12.88□□□□□ -0.35
APBA3-205ENST00000590064 K7EMI3 77 aa12.88□□□□□ -0.35
APBA3-205ENST00000590064 NDUFS7O75251 213 aa12.88□□□□□ -0.35
APBA3-205ENST00000590064 LHBP01229 141 aa12.88□□□□□ -0.35
APBA3-205ENST00000590064 AMTNQ6UX39 209 aa12.88□□□□□ -0.35
APBA3-205ENST00000590064 LYPD1Q8N2G4 141 aa12.88□□□□□ -0.35
APBA3-205ENST00000590064 MBD3L2Q8NHZ7 208 aaPredicted RBP12.88□□□□□ -0.35
APBA3-205ENST00000590064 TNFRSF6BO95407 300 aa12.87□□□□□ -0.35
APBA3-205ENST00000590064 METTL26Q96S19 204 aa12.87□□□□□ -0.35
APBA3-205ENST00000590064 IGLV3-9A0A075B6K5 115 aa12.87□□□□□ -0.35
APBA3-205ENST00000590064 TMEM8BA6NDV4 472 aa12.87□□□□□ -0.35
APBA3-205ENST00000590064 RITA1Q96K30 269 aa12.87□□□□□ -0.35
APBA3-205ENST00000590064 FAM106CPP0CH98 169 aa12.87□□□□□ -0.35
APBA3-205ENST00000590064 AZU1P20160 251 aa12.87□□□□□ -0.35
APBA3-205ENST00000590064 LOXL1Q08397 574 aaPredicted RBP12.87□□□□□ -0.35
APBA3-205ENST00000590064 FAM106AQ4KMX7 169 aa12.87□□□□□ -0.35
APBA3-205ENST00000590064 IGKV1D-37A0A075B6S9 117 aa12.86□□□□□ -0.35
APBA3-205ENST00000590064 VWC2LB2RUY7 222 aa12.86□□□□□ -0.35
APBA3-205ENST00000590064 C19orf71A6NCJ1 209 aa12.86□□□□□ -0.35
APBA3-205ENST00000590064 CR1LQ2VPA4 569 aa12.86□□□□□ -0.35
APBA3-205ENST00000590064 DEFB104AQ8WTQ1 72 aa12.86□□□□□ -0.35
APBA3-205ENST00000590064 JMJD8Q96S16 334 aa12.86□□□□□ -0.35
APBA3-205ENST00000590064 H3BMG7 143 aa12.85□□□□□ -0.35
APBA3-205ENST00000590064 HOXA3O43365 443 aaPredicted RBP12.85□□□□□ -0.35
APBA3-205ENST00000590064 CGB3P0DN86 165 aa12.85□□□□□ -0.35
APBA3-205ENST00000590064 CGB7P0DN87 165 aa12.85□□□□□ -0.35
APBA3-205ENST00000590064 TMEM170BQ5T4T1 132 aa12.85□□□□□ -0.35
APBA3-205ENST00000590064 CKS1BP61024 79 aa12.85□□□□□ -0.35
APBA3-205ENST00000590064 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.85□□□□□ -0.35
APBA3-205ENST00000590064 SMPXQ9UHP9 88 aa12.85□□□□□ -0.35
APBA3-205ENST00000590064 NPIPB6E9PJ23 425 aa12.85□□□□□ -0.35
APBA3-205ENST00000590064 DSCAML1Q8TD84 2053 aa12.85□□□□□ -0.35
APBA3-205ENST00000590064 LOXP28300 417 aaPredicted RBP12.85□□□□□ -0.35
APBA3-205ENST00000590064 COLQQ9Y215 455 aaPredicted RBP12.85□□□□□ -0.35
APBA3-205ENST00000590064 DOPEY2Q9Y3R5 2298 aa12.85□□□□□ -0.35
APBA3-205ENST00000590064 ZNF815PA8K554 130 aa12.84□□□□□ -0.35
APBA3-205ENST00000590064 BUB1B-PAK6H3BSN5 160 aa12.84□□□□□ -0.35
APBA3-205ENST00000590064 PRSS22Q9GZN4 317 aa12.84□□□□□ -0.35
APBA3-205ENST00000590064 TMEM14CQ9P0S9 112 aa12.84□□□□□ -0.35
APBA3-205ENST00000590064 PSMB11A5LHX3 300 aa12.84□□□□□ -0.35
APBA3-205ENST00000590064 SRSF1Q07955 248 aaKnown RBP eCLIP12.84□□□□□ -0.35
APBA3-205ENST00000590064 ERCC8Q13216 396 aa12.84□□□□□ -0.35
APBA3-205ENST00000590064 LAGE3Q14657 143 aa12.84□□□□□ -0.35
APBA3-205ENST00000590064 LINC01560Q8TB33 94 aa12.84□□□□□ -0.35
APBA3-205ENST00000590064 VGLL1Q99990 258 aa12.84□□□□□ -0.35
APBA3-205ENST00000590064 TMEM155Q4W5P6 130 aa12.84□□□□□ -0.35
APBA3-205ENST00000590064 TNFRSF14Q92956 283 aa12.84□□□□□ -0.35
APBA3-205ENST00000590064 MLST8Q9BVC4 326 aa12.84□□□□□ -0.35
APBA3-205ENST00000590064 NPFFR1Q9GZQ6 430 aa12.84□□□□□ -0.35
APBA3-205ENST00000590064 FAM57AQ8TBR7 257 aa12.83□□□□□ -0.36
APBA3-205ENST00000590064 BEX4Q9NWD9 120 aaPredicted RBP12.83□□□□□ -0.36
APBA3-205ENST00000590064 TET2Q6N021 2002 aaPredicted RBP12.83□□□□□ -0.36
APBA3-205ENST00000590064 A0A1W2PNU3 283 aaPredicted RBP12.83□□□□□ -0.36
APBA3-205ENST00000590064 APOBEC3AP31941 199 aaPredicted RBP12.83□□□□□ -0.36
APBA3-205ENST00000590064 FXYD2P54710 66 aa12.83□□□□□ -0.36
APBA3-205ENST00000590064 OR10J6PQ8NGY7 276 aa12.83□□□□□ -0.36
APBA3-205ENST00000590064 CHTOPQ9Y3Y2 248 aaKnown RBP12.83□□□□□ -0.36
APBA3-205ENST00000590064 COL4A2P08572 1712 aa12.83□□□□□ -0.36
APBA3-205ENST00000590064 CLEC19AQ6UXS0 136 aa12.83□□□□□ -0.36
APBA3-205ENST00000590064 PRR25Q96S07 402 aa12.83□□□□□ -0.36
APBA3-205ENST00000590064 B9A039 149 aa12.82□□□□□ -0.36
APBA3-205ENST00000590064 CD300EQ496F6 205 aaPredicted RBP12.82□□□□□ -0.36
APBA3-205ENST00000590064 TEX36Q5VZQ5 186 aa12.82□□□□□ -0.36
APBA3-205ENST00000590064 CLEC2AQ6UVW9 174 aa12.82□□□□□ -0.36
APBA3-205ENST00000590064 MRPL35Q9NZE8 188 aaKnown RBP12.82□□□□□ -0.36
APBA3-205ENST00000590064 NDUFS8O00217 210 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms