RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 TGIF2LXQ8IUE1 241 aa5.8□□□□□ -1.48
SMAD4-209ENST00000589941 CD177Q8N6Q3 437 aa5.8□□□□□ -1.48
SMAD4-209ENST00000589941 C5orf56Q8N8D9 126 aa5.8□□□□□ -1.48
SMAD4-209ENST00000589941 ZNF114Q8NC26 417 aa5.8□□□□□ -1.48
SMAD4-209ENST00000589941 NECAP1Q8NC96 275 aa5.8□□□□□ -1.48
SMAD4-209ENST00000589941 DLX4Q92988 240 aaPredicted RBP5.8□□□□□ -1.48
SMAD4-209ENST00000589941 SDSLQ96GA7 329 aa5.8□□□□□ -1.48
SMAD4-209ENST00000589941 MGST2Q99735 147 aa5.8□□□□□ -1.48
SMAD4-209ENST00000589941 IL36BQ9NZH7 164 aa5.8□□□□□ -1.48
SMAD4-209ENST00000589941 JPT1Q9UK76 154 aa5.8□□□□□ -1.48
SMAD4-209ENST00000589941 TRAPPC1Q9Y5R8 145 aa5.8□□□□□ -1.48
SMAD4-209ENST00000589941 IGKV2D-30A0A075B6S6 120 aa5.79□□□□□ -1.48
SMAD4-209ENST00000589941 M0R143 59 aa5.79□□□□□ -1.48
SMAD4-209ENST00000589941 NDUFB4O95168 129 aa5.79□□□□□ -1.48
SMAD4-209ENST00000589941 REG1AP05451 166 aa5.79□□□□□ -1.48
SMAD4-209ENST00000589941 CGB3P0DN86 165 aa5.79□□□□□ -1.48
SMAD4-209ENST00000589941 CGB7P0DN87 165 aa5.79□□□□□ -1.48
SMAD4-209ENST00000589941 CHRNA7P36544 502 aa5.79□□□□□ -1.48
SMAD4-209ENST00000589941 RPL29P47914 159 aaKnown RBP5.79□□□□□ -1.48
SMAD4-209ENST00000589941 RANP62826 216 aaKnown RBP5.79□□□□□ -1.48
SMAD4-209ENST00000589941 SLC35B1P78383 322 aa5.79□□□□□ -1.48
SMAD4-209ENST00000589941 PRSS8Q16651 343 aa5.79□□□□□ -1.48
SMAD4-209ENST00000589941 UTF1Q5T230 341 aa5.79□□□□□ -1.48
SMAD4-209ENST00000589941 TPTE2P1Q5T6R2 138 aa5.79□□□□□ -1.48
SMAD4-209ENST00000589941 MINOS1Q5TGZ0 78 aa5.79□□□□□ -1.48
SMAD4-209ENST00000589941 CFAP161Q6P656 301 aa5.79□□□□□ -1.48
SMAD4-209ENST00000589941 TMEM256Q8N2U0 113 aa5.79□□□□□ -1.48
SMAD4-209ENST00000589941 TEX45Q8NA69 505 aa5.79□□□□□ -1.48
SMAD4-209ENST00000589941 NEXN-AS1Q8NBZ9 246 aa5.79□□□□□ -1.48
SMAD4-209ENST00000589941 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.79□□□□□ -1.48
SMAD4-209ENST00000589941 MINOS1-NBL1R4GNA1 71 aa5.79□□□□□ -1.48
SMAD4-209ENST00000589941 ZNF320A2RRD8 509 aa5.78□□□□□ -1.48
SMAD4-209ENST00000589941 RTL8CO15255 209 aa5.78□□□□□ -1.48
SMAD4-209ENST00000589941 HMGB3O15347 200 aaKnown RBP5.78□□□□□ -1.48
SMAD4-209ENST00000589941 NUPR1O60356 82 aa5.78□□□□□ -1.48
SMAD4-209ENST00000589941 MT-ND6P03923 174 aa5.78□□□□□ -1.48
SMAD4-209ENST00000589941 ARL14EPLP0DKL9 152 aa5.78□□□□□ -1.48
SMAD4-209ENST00000589941 GCHFRP30047 84 aa5.78□□□□□ -1.48
SMAD4-209ENST00000589941 ATP5IP56385 69 aaPredicted RBP5.78□□□□□ -1.48
SMAD4-209ENST00000589941 TPPP2P59282 170 aa5.78□□□□□ -1.48
SMAD4-209ENST00000589941 SMIM21Q3B7S5 101 aa5.78□□□□□ -1.48
SMAD4-209ENST00000589941 GCSAMLQ5JQS6 135 aa5.78□□□□□ -1.48
SMAD4-209ENST00000589941 LINC00322Q6ZN03 302 aaPredicted RBP5.78□□□□□ -1.48
SMAD4-209ENST00000589941 LINC00336Q6ZUF6 198 aa5.78□□□□□ -1.48
SMAD4-209ENST00000589941 OR13A1Q8NGR1 328 aa5.78□□□□□ -1.48
SMAD4-209ENST00000589941 OR1N2Q8NGR9 330 aa5.78□□□□□ -1.48
SMAD4-209ENST00000589941 CMTM2Q8TAZ6 248 aa5.78□□□□□ -1.48
SMAD4-209ENST00000589941 UBALD1Q8TB05 177 aa5.78□□□□□ -1.48
SMAD4-209ENST00000589941 MYOZ3Q8TDC0 251 aa5.78□□□□□ -1.48
SMAD4-209ENST00000589941 TMEM68Q96MH6 324 aa5.78□□□□□ -1.48
SMAD4-209ENST00000589941 MS4A10Q96PG2 267 aa5.78□□□□□ -1.48
SMAD4-209ENST00000589941 DERL1Q9BUN8 251 aa5.78□□□□□ -1.48
SMAD4-209ENST00000589941 GNB1LQ9BYB4 327 aa5.78□□□□□ -1.48
SMAD4-209ENST00000589941 FOXA2Q9Y261 457 aaPredicted RBP5.78□□□□□ -1.48
SMAD4-209ENST00000589941 YTHDF2Q9Y5A9 579 aaKnown RBP5.78□□□□□ -1.48
SMAD4-209ENST00000589941 SRRM2Q9UQ35 2752 aaKnown RBP5.78□□□□□ -1.48
SMAD4-209ENST00000589941 A0A1W2PPV4 95 aa5.77□□□□□ -1.49
SMAD4-209ENST00000589941 C15orf61A6NNL5 157 aa5.77□□□□□ -1.49
SMAD4-209ENST00000589941 ZNF705GA8MUZ8 300 aaPredicted RBP5.77□□□□□ -1.49
SMAD4-209ENST00000589941 K7EN84 100 aa5.77□□□□□ -1.49
SMAD4-209ENST00000589941 SPINT2O43291 252 aa5.77□□□□□ -1.49
SMAD4-209ENST00000589941 MT-CO2P00403 227 aa5.77□□□□□ -1.49
SMAD4-209ENST00000589941 IGHG2P01859 326 aa5.77□□□□□ -1.49
SMAD4-209ENST00000589941 LINC00869P0C866 280 aa5.77□□□□□ -1.49
SMAD4-209ENST00000589941 GPR12P47775 334 aa5.77□□□□□ -1.49
SMAD4-209ENST00000589941 RHOBP62745 196 aa5.77□□□□□ -1.49
SMAD4-209ENST00000589941 AESQ08117 197 aa5.77□□□□□ -1.49
SMAD4-209ENST00000589941 MZT1Q08AG7 82 aa5.77□□□□□ -1.49
SMAD4-209ENST00000589941 TMEM30BQ3MIR4 351 aa5.77□□□□□ -1.49
SMAD4-209ENST00000589941 MORN2Q502X0 79 aa5.77□□□□□ -1.49
SMAD4-209ENST00000589941 Q8N976 141 aa5.77□□□□□ -1.49
SMAD4-209ENST00000589941 OCC1Q8TAD7 63 aa5.77□□□□□ -1.49
SMAD4-209ENST00000589941 MRGPRDQ8TDS7 321 aa5.77□□□□□ -1.49
SMAD4-209ENST00000589941 MIEN1Q9BRT3 115 aa5.77□□□□□ -1.49
SMAD4-209ENST00000589941 WFDC10AQ9H1F0 79 aa5.77□□□□□ -1.49
SMAD4-209ENST00000589941 IFI27L2Q9H2X8 130 aa5.77□□□□□ -1.49
SMAD4-209ENST00000589941 LINC00574Q9H8X3 128 aa5.77□□□□□ -1.49
SMAD4-209ENST00000589941 PLEKHA3Q9HB20 300 aa5.77□□□□□ -1.49
SMAD4-209ENST00000589941 NPVFQ9HCQ7 196 aa5.77□□□□□ -1.49
SMAD4-209ENST00000589941 OSTCQ9NRP0 149 aa5.77□□□□□ -1.49
SMAD4-209ENST00000589941 TMEM14BQ9NUH8 114 aa5.77□□□□□ -1.49
SMAD4-209ENST00000589941 V9GYV3 84 aa5.77□□□□□ -1.49
SMAD4-209ENST00000589941 VPS13BQ7Z7G8 4022 aa5.77□□□□□ -1.49
SMAD4-209ENST00000589941 FAT1Q14517 4588 aa5.76□□□□□ -1.49
SMAD4-209ENST00000589941 A0A0J9YWU9 116 aa5.76□□□□□ -1.49
SMAD4-209ENST00000589941 INS-IGF2F8WCM5 200 aa5.76□□□□□ -1.49
SMAD4-209ENST00000589941 IGF1P05019 195 aa5.76□□□□□ -1.49
SMAD4-209ENST00000589941 LINC00614P0C842 121 aa5.76□□□□□ -1.49
SMAD4-209ENST00000589941 DEFA4P12838 97 aa5.76□□□□□ -1.49
SMAD4-209ENST00000589941 HTR1DP28221 377 aa5.76□□□□□ -1.49
SMAD4-209ENST00000589941 BRS3P32247 399 aa5.76□□□□□ -1.49
SMAD4-209ENST00000589941 SSTR5P35346 364 aa5.76□□□□□ -1.49
SMAD4-209ENST00000589941 CTRLP40313 264 aa5.76□□□□□ -1.49
SMAD4-209ENST00000589941 EDDM3BP56851 147 aa5.76□□□□□ -1.49
SMAD4-209ENST00000589941 CX3CL1P78423 397 aa5.76□□□□□ -1.49
SMAD4-209ENST00000589941 RELQ04864 619 aaPredicted RBP5.76□□□□□ -1.49
SMAD4-209ENST00000589941 OR10J3Q5JRS4 329 aa5.76□□□□□ -1.49
SMAD4-209ENST00000589941 PRAMEF5Q5TYX0 476 aa5.76□□□□□ -1.49
SMAD4-209ENST00000589941 MIC13Q5XKP0 118 aa5.76□□□□□ -1.49
SMAD4-209ENST00000589941 WDR73Q6P4I2 378 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms