RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 SNAPINO95295 136 aa13.17□□□□□ -0.3
CXXC1-212ENST00000589940 HLA-DMBP28068 263 aa13.17□□□□□ -0.3
CXXC1-212ENST00000589940 TVP23CQ96ET8 276 aa13.17□□□□□ -0.3
CXXC1-212ENST00000589940 FBN1P35555 2871 aaKnown RBP13.16□□□□□ -0.3
CXXC1-212ENST00000589940 DIRC3C9JPN6 131 aa13.16□□□□□ -0.3
CXXC1-212ENST00000589940 SAMD13Q5VXD3 122 aa13.16□□□□□ -0.3
CXXC1-212ENST00000589940 GOLT1AQ6ZVE7 132 aa13.16□□□□□ -0.3
CXXC1-212ENST00000589940 RNF182Q8N6D2 247 aa13.16□□□□□ -0.3
CXXC1-212ENST00000589940 SDF2L1Q9HCN8 221 aa13.16□□□□□ -0.3
CXXC1-212ENST00000589940 KLF12Q9Y4X4 402 aa13.16□□□□□ -0.3
CXXC1-212ENST00000589940 C9JCJ5 164 aa13.16□□□□□ -0.3
CXXC1-212ENST00000589940 PNRC1Q12796 327 aaPredicted RBP13.16□□□□□ -0.3
CXXC1-212ENST00000589940 CLRN3Q8NCR9 226 aa13.16□□□□□ -0.3
CXXC1-212ENST00000589940 M0R036 132 aa13.15□□□□□ -0.3
CXXC1-212ENST00000589940 ISLRO14498 428 aa13.15□□□□□ -0.3
CXXC1-212ENST00000589940 TAS2R60P59551 318 aa13.15□□□□□ -0.3
CXXC1-212ENST00000589940 TMEM183BQ1AE95 376 aa13.15□□□□□ -0.3
CXXC1-212ENST00000589940 MRPL53Q96EL3 112 aaKnown RBP13.15□□□□□ -0.3
CXXC1-212ENST00000589940 MS4A6AQ9H2W1 248 aa13.15□□□□□ -0.3
CXXC1-212ENST00000589940 TRAV34A0A0B4J273 112 aa13.15□□□□□ -0.31
CXXC1-212ENST00000589940 SERTM2A0A1B0GWG4 89 aa13.15□□□□□ -0.31
CXXC1-212ENST00000589940 K7EQM0 130 aa13.15□□□□□ -0.31
CXXC1-212ENST00000589940 S100A9P06702 114 aaKnown RBP13.15□□□□□ -0.31
CXXC1-212ENST00000589940 GNG4P50150 75 aa13.15□□□□□ -0.31
CXXC1-212ENST00000589940 UBE2G1P62253 170 aa13.15□□□□□ -0.31
CXXC1-212ENST00000589940 CENPWQ5EE01 88 aa13.15□□□□□ -0.31
CXXC1-212ENST00000589940 LCN12Q6JVE5 192 aa13.15□□□□□ -0.31
CXXC1-212ENST00000589940 GBGT1Q8N5D6 347 aa13.15□□□□□ -0.31
CXXC1-212ENST00000589940 DYNLRB2Q8TF09 96 aa13.15□□□□□ -0.31
CXXC1-212ENST00000589940 DCANP1Q8TF63 244 aa13.15□□□□□ -0.31
CXXC1-212ENST00000589940 FMC1Q96HJ9 113 aa13.15□□□□□ -0.31
CXXC1-212ENST00000589940 SIGLEC8Q9NYZ4 499 aa13.15□□□□□ -0.31
CXXC1-212ENST00000589940 ZNF705FA8MVS1 300 aaPredicted RBP13.14□□□□□ -0.31
CXXC1-212ENST00000589940 IGF2BP2-AS1Q96M15 143 aa13.14□□□□□ -0.31
CXXC1-212ENST00000589940 PF4P02776 101 aa13.13□□□□□ -0.31
CXXC1-212ENST00000589940 RPL23P62829 140 aaKnown RBP13.13□□□□□ -0.31
CXXC1-212ENST00000589940 PSG3Q16557 428 aa13.13□□□□□ -0.31
CXXC1-212ENST00000589940 ATRAIDQ6UW56 229 aa13.13□□□□□ -0.31
CXXC1-212ENST00000589940 TMEM75Q8N9X5 138 aa13.13□□□□□ -0.31
CXXC1-212ENST00000589940 PGPEP1LA6NFU8 196 aa13.13□□□□□ -0.31
CXXC1-212ENST00000589940 ADIRFQ15847 76 aa13.13□□□□□ -0.31
CXXC1-212ENST00000589940 LINC01551Q86U37 167 aa13.13□□□□□ -0.31
CXXC1-212ENST00000589940 SGK494Q96LW2 274 aa13.13□□□□□ -0.31
CXXC1-212ENST00000589940 LY96Q9Y6Y9 160 aa13.13□□□□□ -0.31
CXXC1-212ENST00000589940 TRAV8-1A0A0A6YYK1 113 aa13.12□□□□□ -0.31
CXXC1-212ENST00000589940 DNASE2O00115 360 aaPredicted RBP13.12□□□□□ -0.31
CXXC1-212ENST00000589940 PRB4P10163 310 aaPredicted RBP13.12□□□□□ -0.31
CXXC1-212ENST00000589940 DEFB114Q30KQ6 69 aa13.12□□□□□ -0.31
CXXC1-212ENST00000589940 C20orf173Q96LM9 149 aa13.12□□□□□ -0.31
CXXC1-212ENST00000589940 IGLV2-11P01706 119 aa13.12□□□□□ -0.31
CXXC1-212ENST00000589940 ID1P41134 155 aa13.12□□□□□ -0.31
CXXC1-212ENST00000589940 PAFAH1B2P68402 229 aa13.12□□□□□ -0.31
CXXC1-212ENST00000589940 RBPMS2Q6ZRY4 209 aaKnown RBP13.12□□□□□ -0.31
CXXC1-212ENST00000589940 WFDC3Q8IUB2 231 aa13.12□□□□□ -0.31
CXXC1-212ENST00000589940 OCC1Q8TAD7 63 aa13.12□□□□□ -0.31
CXXC1-212ENST00000589940 IGKV2-40A0A087WW87 121 aaPredicted RBP13.11□□□□□ -0.31
CXXC1-212ENST00000589940 TRBV6-1A0A0K0K1D8 114 aa13.11□□□□□ -0.31
CXXC1-212ENST00000589940 IGKV2D-40P01614 121 aaPredicted RBP13.11□□□□□ -0.31
CXXC1-212ENST00000589940 TFPI2P48307 235 aa13.11□□□□□ -0.31
CXXC1-212ENST00000589940 RHEBQ15382 184 aa13.11□□□□□ -0.31
CXXC1-212ENST00000589940 TMEM61Q8N0U2 210 aa13.11□□□□□ -0.31
CXXC1-212ENST00000589940 LINC00482Q8N8I6 264 aa13.11□□□□□ -0.31
CXXC1-212ENST00000589940 AURKAIP1Q9NWT8 199 aaPredicted RBP13.11□□□□□ -0.31
CXXC1-212ENST00000589940 PRAC2D3DTV9 90 aa13.11□□□□□ -0.31
CXXC1-212ENST00000589940 K7EQG2 157 aa13.11□□□□□ -0.31
CXXC1-212ENST00000589940 TSPAN4O14817 238 aa13.11□□□□□ -0.31
CXXC1-212ENST00000589940 Q86TA4 180 aa13.11□□□□□ -0.31
CXXC1-212ENST00000589940 BAGE2Q86Y30 109 aa13.11□□□□□ -0.31
CXXC1-212ENST00000589940 ZNF738Q8NE65 137 aa13.11□□□□□ -0.31
CXXC1-212ENST00000589940 VWFP04275 2813 aa13.1□□□□□ -0.31
CXXC1-212ENST00000589940 C7orf77A4D0Y5 90 aa13.1□□□□□ -0.31
CXXC1-212ENST00000589940 B4DEV8 164 aa13.1□□□□□ -0.31
CXXC1-212ENST00000589940 LTAP01374 205 aa13.1□□□□□ -0.31
CXXC1-212ENST00000589940 FLI1Q01543 452 aaPredicted RBP13.1□□□□□ -0.31
CXXC1-212ENST00000589940 RBAKDNA6NC62 111 aa13.09□□□□□ -0.31
CXXC1-212ENST00000589940 IGLV2-8P01709 118 aa13.09□□□□□ -0.31
CXXC1-212ENST00000589940 CD300EQ496F6 205 aaPredicted RBP13.09□□□□□ -0.31
CXXC1-212ENST00000589940 PSG8Q9UQ74 426 aa13.09□□□□□ -0.31
CXXC1-212ENST00000589940 TRAV2A0A0B4J234 112 aa13.09□□□□□ -0.31
CXXC1-212ENST00000589940 FBLL1A6NHQ2 334 aaKnown RBP13.09□□□□□ -0.31
CXXC1-212ENST00000589940 SAP30O75446 220 aa13.09□□□□□ -0.31
CXXC1-212ENST00000589940 SCO1O75880 301 aa13.09□□□□□ -0.31
CXXC1-212ENST00000589940 SNRPD3P62318 126 aaKnown RBP13.09□□□□□ -0.31
CXXC1-212ENST00000589940 PRNTQ86SH4 94 aa13.09□□□□□ -0.31
CXXC1-212ENST00000589940 SMIM12Q96EX1 92 aa13.09□□□□□ -0.31
CXXC1-212ENST00000589940 ZNF747Q9BV97 191 aa13.09□□□□□ -0.31
CXXC1-212ENST00000589940 TRAV25A0A0B4J276 109 aa13.08□□□□□ -0.32
CXXC1-212ENST00000589940 K7EN84 100 aa13.08□□□□□ -0.32
CXXC1-212ENST00000589940 FAM24BQ8N5W8 94 aa13.08□□□□□ -0.32
CXXC1-212ENST00000589940 NHLRC2Q8NBF2 726 aa13.08□□□□□ -0.32
CXXC1-212ENST00000589940 VGLL1Q99990 258 aa13.08□□□□□ -0.32
CXXC1-212ENST00000589940 RPS10P5Q9NQ39 176 aa13.08□□□□□ -0.32
CXXC1-212ENST00000589940 TMEM158Q8WZ71 300 aa13.08□□□□□ -0.32
CXXC1-212ENST00000589940 ISOC2Q96AB3 205 aa13.08□□□□□ -0.32
CXXC1-212ENST00000589940 ZNF688P0C7X2 276 aa13.07□□□□□ -0.32
CXXC1-212ENST00000589940 MLST8Q9BVC4 326 aa13.07□□□□□ -0.32
CXXC1-212ENST00000589940 ZFP30Q9Y2G7 519 aa13.07□□□□□ -0.32
CXXC1-212ENST00000589940 SPAG8Q99932 426 aaPredicted RBP13.07□□□□□ -0.32
CXXC1-212ENST00000589940 MGST1P10620 155 aaKnown RBP13.06□□□□□ -0.32
CXXC1-212ENST00000589940 PSMG4Q5JS54 123 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms