RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 MYOZ3Q8TDC0 251 aa11.55□□□□□ -0.56
RETREG3-208ENST00000589797 NPFFR1Q9GZQ6 430 aa11.55□□□□□ -0.56
RETREG3-208ENST00000589797 RAB9AP51151 201 aa11.54□□□□□ -0.56
RETREG3-208ENST00000589797 TMEM95Q3KNT9 176 aa11.54□□□□□ -0.56
RETREG3-208ENST00000589797 OR4X2Q8NGF9 303 aa11.54□□□□□ -0.56
RETREG3-208ENST00000589797 ZFP30Q9Y2G7 519 aa11.54□□□□□ -0.56
RETREG3-208ENST00000589797 V9GYV3 84 aa11.54□□□□□ -0.56
RETREG3-208ENST00000589797 NUDT3O95989 172 aa11.54□□□□□ -0.56
RETREG3-208ENST00000589797 IGKV1-17P01599 117 aa11.54□□□□□ -0.56
RETREG3-208ENST00000589797 IL17RELQ6ZVW7 336 aa11.54□□□□□ -0.56
RETREG3-208ENST00000589797 MAP1LC3AQ9H492 121 aa11.54□□□□□ -0.56
RETREG3-208ENST00000589797 ANKRD17O75179 2603 aaKnown RBP11.54□□□□□ -0.56
RETREG3-208ENST00000589797 H3BVH4 76 aa11.54□□□□□ -0.56
RETREG3-208ENST00000589797 SLAQ13239 276 aa11.54□□□□□ -0.56
RETREG3-208ENST00000589797 ZNF502Q8TBZ5 544 aa11.54□□□□□ -0.56
RETREG3-208ENST00000589797 MSMBP08118 114 aa11.54□□□□□ -0.56
RETREG3-208ENST00000589797 FNDC10F2Z333 226 aa11.53□□□□□ -0.56
RETREG3-208ENST00000589797 LINC00614P0C842 121 aa11.53□□□□□ -0.56
RETREG3-208ENST00000589797 CR1LQ2VPA4 569 aa11.53□□□□□ -0.56
RETREG3-208ENST00000589797 AMN1Q8IY45 258 aa11.53□□□□□ -0.56
RETREG3-208ENST00000589797 ZNF491Q8N8L2 437 aa11.53□□□□□ -0.56
RETREG3-208ENST00000589797 ITLN2Q8WWU7 325 aaPredicted RBP11.53□□□□□ -0.56
RETREG3-208ENST00000589797 DMXL1Q9Y485 3027 aa11.53□□□□□ -0.56
RETREG3-208ENST00000589797 TMEM213A2RRL7 107 aa11.53□□□□□ -0.56
RETREG3-208ENST00000589797 BLCAPP62952 87 aa11.53□□□□□ -0.56
RETREG3-208ENST00000589797 IGHV4-30-2A0A087WSY4 118 aa11.53□□□□□ -0.56
RETREG3-208ENST00000589797 IGHV4-39P01824 125 aa11.53□□□□□ -0.56
RETREG3-208ENST00000589797 SIGLEC15Q6ZMC9 328 aa11.53□□□□□ -0.56
RETREG3-208ENST00000589797 ZNF664Q8N3J9 261 aa11.53□□□□□ -0.56
RETREG3-208ENST00000589797 HECTD1Q9ULT8 2610 aa11.52□□□□□ -0.56
RETREG3-208ENST00000589797 ADAMTS20P59510 1910 aa11.52□□□□□ -0.56
RETREG3-208ENST00000589797 FCN3O75636 299 aa11.52□□□□□ -0.56
RETREG3-208ENST00000589797 TOMM40O96008 361 aa11.52□□□□□ -0.56
RETREG3-208ENST00000589797 IGLV2-23P01705 113 aa11.52□□□□□ -0.56
RETREG3-208ENST00000589797 IGHV4-38-2P0DP08 117 aa11.52□□□□□ -0.56
RETREG3-208ENST00000589797 LINC00469Q8N7U9 141 aa11.52□□□□□ -0.56
RETREG3-208ENST00000589797 RAB37Q96AX2 223 aa11.52□□□□□ -0.56
RETREG3-208ENST00000589797 NDUFS6O75380 124 aaKnown RBP11.52□□□□□ -0.57
RETREG3-208ENST00000589797 YAE1D1Q9NRH1 226 aa11.52□□□□□ -0.57
RETREG3-208ENST00000589797 TRBV19A0A075B6N1 114 aa11.52□□□□□ -0.57
RETREG3-208ENST00000589797 D6R8Y8 96 aa11.52□□□□□ -0.57
RETREG3-208ENST00000589797 NUPR1O60356 82 aa11.52□□□□□ -0.57
RETREG3-208ENST00000589797 PSMG4Q5JS54 123 aa11.52□□□□□ -0.57
RETREG3-208ENST00000589797 ORMDL3Q8N138 153 aa11.52□□□□□ -0.57
RETREG3-208ENST00000589797 TMEM160Q9NX00 188 aa11.52□□□□□ -0.57
RETREG3-208ENST00000589797 IGHV1-69DA0A0B4J2H0 117 aa11.51□□□□□ -0.57
RETREG3-208ENST00000589797 SH2D1AO60880 128 aa11.51□□□□□ -0.57
RETREG3-208ENST00000589797 IGHV1-69P01742 117 aa11.51□□□□□ -0.57
RETREG3-208ENST00000589797 DGAT2L7PQ6IED9 249 aa11.51□□□□□ -0.57
RETREG3-208ENST00000589797 SCGB1D4Q6XE38 83 aa11.51□□□□□ -0.57
RETREG3-208ENST00000589797 Q86TA4 180 aa11.51□□□□□ -0.57
RETREG3-208ENST00000589797 FBLL1A6NHQ2 334 aaKnown RBP11.51□□□□□ -0.57
RETREG3-208ENST00000589797 OOSP1A8MZH6 123 aa11.51□□□□□ -0.57
RETREG3-208ENST00000589797 PSG3Q16557 428 aa11.51□□□□□ -0.57
RETREG3-208ENST00000589797 REC114Q7Z4M0 266 aa11.51□□□□□ -0.57
RETREG3-208ENST00000589797 CD7P09564 240 aa11.51□□□□□ -0.57
RETREG3-208ENST00000589797 SNRPD3P62318 126 aaKnown RBP11.51□□□□□ -0.57
RETREG3-208ENST00000589797 ATMQ13315 3056 aa11.51□□□□□ -0.57
RETREG3-208ENST00000589797 EIF4EBP1Q13541 118 aaPredicted RBP11.51□□□□□ -0.57
RETREG3-208ENST00000589797 UQCR10Q9UDW1 63 aa11.51□□□□□ -0.57
RETREG3-208ENST00000589797 K7EIM0 57 aa11.5□□□□□ -0.57
RETREG3-208ENST00000589797 HOXB4P17483 251 aaPredicted RBP11.5□□□□□ -0.57
RETREG3-208ENST00000589797 ZNF56Q15929 161 aa11.5□□□□□ -0.57
RETREG3-208ENST00000589797 DYNAPQ8N1N2 210 aa11.5□□□□□ -0.57
RETREG3-208ENST00000589797 LINC01548A6NM66 108 aa11.5□□□□□ -0.57
RETREG3-208ENST00000589797 C3orf79P0CE67 100 aa11.5□□□□□ -0.57
RETREG3-208ENST00000589797 OR4C5Q8NGB2 326 aa11.5□□□□□ -0.57
RETREG3-208ENST00000589797 VGLL1Q99990 258 aa11.5□□□□□ -0.57
RETREG3-208ENST00000589797 PRDM13Q9H4Q3 707 aa11.5□□□□□ -0.57
RETREG3-208ENST00000589797 SOX21Q9Y651 276 aaPredicted RBP11.5□□□□□ -0.57
RETREG3-208ENST00000589797 TRAV8-6A0A0B4J262 113 aa11.5□□□□□ -0.57
RETREG3-208ENST00000589797 RPS20P60866 119 aaKnown RBP11.5□□□□□ -0.57
RETREG3-208ENST00000589797 RHPN1-AS1Q9BWJ2 59 aa11.5□□□□□ -0.57
RETREG3-208ENST00000589797 COL5A1P20908 1838 aaPredicted RBP11.49□□□□□ -0.57
RETREG3-208ENST00000589797 TRAV9-1A0A075B6T8 112 aa11.49□□□□□ -0.57
RETREG3-208ENST00000589797 SYNJ2BPP57105 145 aa11.49□□□□□ -0.57
RETREG3-208ENST00000589797 FAM167A-AS1Q96KT0 104 aa11.49□□□□□ -0.57
RETREG3-208ENST00000589797 ZNF256Q9Y2P7 627 aaPredicted RBP11.49□□□□□ -0.57
RETREG3-208ENST00000589797 DEFB1P60022 68 aa11.49□□□□□ -0.57
RETREG3-208ENST00000589797 RCHY1Q96PM5 261 aa11.49□□□□□ -0.57
RETREG3-208ENST00000589797 RPLP1P05386 114 aaKnown RBP11.49□□□□□ -0.57
RETREG3-208ENST00000589797 Q71RC1 249 aaPredicted RBP11.49□□□□□ -0.57
RETREG3-208ENST00000589797 IGHV7-81A0A0B4J1V7 117 aa11.48□□□□□ -0.57
RETREG3-208ENST00000589797 PRSS22Q9GZN4 317 aa11.48□□□□□ -0.57
RETREG3-208ENST00000589797 JKAMPQ9P055 326 aa11.48□□□□□ -0.57
RETREG3-208ENST00000589797 PCSK5Q92824 1860 aa11.48□□□□□ -0.57
RETREG3-208ENST00000589797 SLC25A34Q6PIV7 304 aa11.48□□□□□ -0.57
RETREG3-208ENST00000589797 ZNF503Q96F45 646 aa11.48□□□□□ -0.57
RETREG3-208ENST00000589797 ZC2HC1AQ96GY0 325 aa11.48□□□□□ -0.57
RETREG3-208ENST00000589797 CENPVL3A0A0U1RRI6 287 aa11.47□□□□□ -0.57
RETREG3-208ENST00000589797 F6UB75 175 aa11.47□□□□□ -0.57
RETREG3-208ENST00000589797 TCF21O43680 179 aa11.47□□□□□ -0.57
RETREG3-208ENST00000589797 PIP4P2Q8N4L2 257 aa11.47□□□□□ -0.57
RETREG3-208ENST00000589797 ZNF414Q96IQ9 312 aa11.47□□□□□ -0.57
RETREG3-208ENST00000589797 DUX3Q96PT4 197 aa11.47□□□□□ -0.57
RETREG3-208ENST00000589797 SLC50A1Q9BRV3 221 aa11.47□□□□□ -0.57
RETREG3-208ENST00000589797 TEX22C9J3V5 150 aa11.47□□□□□ -0.57
RETREG3-208ENST00000589797 TMEM249Q2WGJ8 235 aa11.47□□□□□ -0.57
RETREG3-208ENST00000589797 THAP8Q8NA92 274 aa11.47□□□□□ -0.57
RETREG3-208ENST00000589797 OR11H6Q8NGC7 330 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms