RNA–Protein interactions for RNA: ENST00000589614.5

TREM1-204, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TREM1, Length 772 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-204ENST00000589614 GGNBP1Q5YKI7 109 aa6.13□□□□□ -1.43
TREM1-204ENST00000589614 ARRDC1Q8N5I2 433 aa6.13□□□□□ -1.43
TREM1-204ENST00000589614 PCNPQ8WW12 178 aaKnown RBP6.13□□□□□ -1.43
TREM1-204ENST00000589614 RPUSD4Q96CM3 377 aaKnown RBP6.13□□□□□ -1.43
TREM1-204ENST00000589614 SLC35E1Q96K37 410 aa6.13□□□□□ -1.43
TREM1-204ENST00000589614 CACFD1Q9UGQ2 172 aa6.13□□□□□ -1.43
TREM1-204ENST00000589614 TMEM56-RWDD3S4R434 201 aa6.13□□□□□ -1.43
TREM1-204ENST00000589614 U3KQ87 197 aa6.13□□□□□ -1.43
TREM1-204ENST00000589614 TRAV12-3A0A0B4J271 114 aa6.12□□□□□ -1.43
TREM1-204ENST00000589614 C3orf85A0A1B0GTC6 90 aa6.12□□□□□ -1.43
TREM1-204ENST00000589614 CEBPZOSA8MTT3 80 aa6.12□□□□□ -1.43
TREM1-204ENST00000589614 E5RGE8 158 aa6.12□□□□□ -1.43
TREM1-204ENST00000589614 IGHV3-53P01767 116 aa6.12□□□□□ -1.43
TREM1-204ENST00000589614 TCL1AP56279 114 aa6.12□□□□□ -1.43
TREM1-204ENST00000589614 ATP5IP56385 69 aaPredicted RBP6.12□□□□□ -1.43
TREM1-204ENST00000589614 SH2D6Q7Z4S9 175 aa6.12□□□□□ -1.43
TREM1-204ENST00000589614 IQCF2Q8IXL9 164 aa6.12□□□□□ -1.43
TREM1-204ENST00000589614 ZBTB8BQ8NAP8 495 aaPredicted RBP6.12□□□□□ -1.43
TREM1-204ENST00000589614 OR5H6Q8NGV6 325 aa6.12□□□□□ -1.43
TREM1-204ENST00000589614 RNASE11Q8TAA1 199 aaKnown RBP6.12□□□□□ -1.43
TREM1-204ENST00000589614 BLNKQ8WV28 456 aa6.12□□□□□ -1.43
TREM1-204ENST00000589614 LINC01600Q96MT4 127 aa6.12□□□□□ -1.43
TREM1-204ENST00000589614 DPH3P1Q9H4G8 78 aa6.12□□□□□ -1.43
TREM1-204ENST00000589614 TPRKBQ9Y3C4 175 aa6.12□□□□□ -1.43
TREM1-204ENST00000589614 IGKV1OR2-108A0A075B7D4 117 aa6.11□□□□□ -1.43
TREM1-204ENST00000589614 A0A087X0K7 114 aa6.11□□□□□ -1.43
TREM1-204ENST00000589614 B3GALNT1O75752 331 aa6.11□□□□□ -1.43
TREM1-204ENST00000589614 RPL7P18124 248 aaKnown RBP6.11□□□□□ -1.43
TREM1-204ENST00000589614 IBA57Q5T440 356 aaKnown RBP6.11□□□□□ -1.43
TREM1-204ENST00000589614 GPR107Q5VW38 600 aa6.11□□□□□ -1.43
TREM1-204ENST00000589614 C9orf47Q6ZRZ4 202 aa6.11□□□□□ -1.43
TREM1-204ENST00000589614 PRSS48Q7RTY5 328 aa6.11□□□□□ -1.43
TREM1-204ENST00000589614 Q8N976 141 aa6.11□□□□□ -1.43
TREM1-204ENST00000589614 THAP8Q8NA92 274 aa6.11□□□□□ -1.43
TREM1-204ENST00000589614 HSD17B11Q8NBQ5 300 aa6.11□□□□□ -1.43
TREM1-204ENST00000589614 ODF3Q96PU9 254 aa6.11□□□□□ -1.43
TREM1-204ENST00000589614 PARD6GQ9BYG4 376 aaPredicted RBP6.11□□□□□ -1.43
TREM1-204ENST00000589614 KLF12Q9Y4X4 402 aa6.11□□□□□ -1.43
TREM1-204ENST00000589614 C9JCJ5 164 aa6.1□□□□□ -1.43
TREM1-204ENST00000589614 CCNKO75909 580 aa6.1□□□□□ -1.43
TREM1-204ENST00000589614 HOXB5P09067 269 aa6.1□□□□□ -1.43
TREM1-204ENST00000589614 GATA2P23769 480 aaPredicted RBP6.1□□□□□ -1.43
TREM1-204ENST00000589614 HLA-DMAP28067 261 aa6.1□□□□□ -1.43
TREM1-204ENST00000589614 RCVRNP35243 200 aa6.1□□□□□ -1.43
TREM1-204ENST00000589614 PIGPP57054 158 aa6.1□□□□□ -1.43
TREM1-204ENST00000589614 ZNF846Q147U1 533 aa6.1□□□□□ -1.43
TREM1-204ENST00000589614 CCDC190Q86UF4 302 aa6.1□□□□□ -1.43
TREM1-204ENST00000589614 EIF4E3Q8N5X7 224 aaKnown RBP6.1□□□□□ -1.43
TREM1-204ENST00000589614 ZNF431Q8TF32 576 aaPredicted RBP6.1□□□□□ -1.43
TREM1-204ENST00000589614 COX11Q9Y6N1 276 aa6.1□□□□□ -1.43
TREM1-204ENST00000589614 TRAV8-3A0A0A6YYJ7 113 aa6.09□□□□□ -1.43
TREM1-204ENST00000589614 TRAV8-6A0A0B4J262 113 aa6.09□□□□□ -1.43
TREM1-204ENST00000589614 TRGV4A0A0C4DH28 118 aa6.09□□□□□ -1.43
TREM1-204ENST00000589614 RNF222A6NCQ9 220 aa6.09□□□□□ -1.43
TREM1-204ENST00000589614 USP17L23D6RBM5 183 aa6.09□□□□□ -1.43
TREM1-204ENST00000589614 H3BRN7 92 aa6.09□□□□□ -1.43
TREM1-204ENST00000589614 CDS2O95674 445 aa6.09□□□□□ -1.43
TREM1-204ENST00000589614 PGAM2P15259 253 aa6.09□□□□□ -1.43
TREM1-204ENST00000589614 ORM2P19652 201 aa6.09□□□□□ -1.43
TREM1-204ENST00000589614 TMEM268Q5VZI3 342 aa6.09□□□□□ -1.43
TREM1-204ENST00000589614 LGI3Q8N145 548 aa6.09□□□□□ -1.43
TREM1-204ENST00000589614 BPIFCQ8NFQ6 507 aa6.09□□□□□ -1.43
TREM1-204ENST00000589614 LRRC20Q8TCA0 184 aa6.09□□□□□ -1.43
TREM1-204ENST00000589614 BAALCQ8WXS3 180 aa6.09□□□□□ -1.43
TREM1-204ENST00000589614 TMEM147Q9BVK8 224 aa6.09□□□□□ -1.43
TREM1-204ENST00000589614 SLC25A31Q9H0C2 315 aa6.09□□□□□ -1.43
TREM1-204ENST00000589614 TXNL4BQ9NX01 149 aaKnown RBP6.09□□□□□ -1.43
TREM1-204ENST00000589614 FSIP2Q5CZC0 6907 aa6.08□□□□□ -1.44
TREM1-204ENST00000589614 A0A0D9SG52 128 aa6.08□□□□□ -1.44
TREM1-204ENST00000589614 CXCL2P19875 107 aa6.08□□□□□ -1.44
TREM1-204ENST00000589614 LEPP41159 167 aa6.08□□□□□ -1.44
TREM1-204ENST00000589614 SP6Q3SY56 376 aa6.08□□□□□ -1.44
TREM1-204ENST00000589614 ATP6V0E2Q8NHE4 81 aa6.08□□□□□ -1.44
TREM1-204ENST00000589614 S100A16Q96FQ6 103 aaKnown RBP6.08□□□□□ -1.44
TREM1-204ENST00000589614 SHANK2-AS3Q9BTD1 123 aa6.08□□□□□ -1.44
TREM1-204ENST00000589614 TMEM222Q9H0R3 208 aa6.08□□□□□ -1.44
TREM1-204ENST00000589614 MRPL16Q9NX20 251 aaKnown RBP6.08□□□□□ -1.44
TREM1-204ENST00000589614 IGHV3-30P01768 117 aa6.07□□□□□ -1.44
TREM1-204ENST00000589614 IGHV3-33P01772 117 aa6.07□□□□□ -1.44
TREM1-204ENST00000589614 SLC25A5P05141 298 aaKnown RBP6.07□□□□□ -1.44
TREM1-204ENST00000589614 CT45A10P0DMU9 189 aa6.07□□□□□ -1.44
TREM1-204ENST00000589614 IGHV3-30-3P0DP02 117 aa6.07□□□□□ -1.44
TREM1-204ENST00000589614 IGHV3-30-5P0DP03 117 aa6.07□□□□□ -1.44
TREM1-204ENST00000589614 PRSS3P35030 304 aa6.07□□□□□ -1.44
TREM1-204ENST00000589614 PPT1P50897 306 aa6.07□□□□□ -1.44
TREM1-204ENST00000589614 MEF2DQ14814 521 aa6.07□□□□□ -1.44
TREM1-204ENST00000589614 OR10J3Q5JRS4 329 aa6.07□□□□□ -1.44
TREM1-204ENST00000589614 FFAR4Q5NUL3 377 aa6.07□□□□□ -1.44
TREM1-204ENST00000589614 LHFPL1Q86WI0 220 aa6.07□□□□□ -1.44
TREM1-204ENST00000589614 CCDC71LQ8N9Z2 235 aa6.07□□□□□ -1.44
TREM1-204ENST00000589614 OR10G4Q8NGN3 311 aa6.07□□□□□ -1.44
TREM1-204ENST00000589614 DTD1Q8TEA8 209 aa6.07□□□□□ -1.44
TREM1-204ENST00000589614 SLC50A1Q9BRV3 221 aa6.07□□□□□ -1.44
TREM1-204ENST00000589614 ZNF331Q9NQX6 463 aaPredicted RBP6.07□□□□□ -1.44
TREM1-204ENST00000589614 COPZ2Q9P299 210 aa6.07□□□□□ -1.44
TREM1-204ENST00000589614 RPH3ALQ9UNE2 315 aa6.07□□□□□ -1.44
TREM1-204ENST00000589614 A0A0J9YXV3 536 aa6.06□□□□□ -1.44
TREM1-204ENST00000589614 LINC00854A0A1B0GVQ3 168 aa6.06□□□□□ -1.44
TREM1-204ENST00000589614 C7orf71A4D174 169 aa6.06□□□□□ -1.44
TREM1-204ENST00000589614 CRYM-AS1A6NIL9 109 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms