RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 SFTA3P0C7M3 94 aa10.88□□□□□ -0.67
NPC1-207ENST00000588867 RIPPLY3P57055 190 aa10.88□□□□□ -0.67
NPC1-207ENST00000588867 PSG3Q16557 428 aa10.88□□□□□ -0.67
NPC1-207ENST00000588867 C9orf66Q5T8R8 295 aa10.88□□□□□ -0.67
NPC1-207ENST00000588867 FAM24BQ8N5W8 94 aa10.88□□□□□ -0.67
NPC1-207ENST00000588867 WFDC9Q8NEX5 89 aa10.88□□□□□ -0.67
NPC1-207ENST00000588867 RPUSD4Q96CM3 377 aaKnown RBP10.88□□□□□ -0.67
NPC1-207ENST00000588867 C20orf173Q96LM9 149 aa10.88□□□□□ -0.67
NPC1-207ENST00000588867 TMEM250H0YL14 139 aa10.87□□□□□ -0.67
NPC1-207ENST00000588867 ZNF688P0C7X2 276 aa10.87□□□□□ -0.67
NPC1-207ENST00000588867 ZNF674Q2M3X9 581 aa10.87□□□□□ -0.67
NPC1-207ENST00000588867 SAMD13Q5VXD3 122 aa10.87□□□□□ -0.67
NPC1-207ENST00000588867 ZNF738Q8NE65 137 aa10.87□□□□□ -0.67
NPC1-207ENST00000588867 SPAG8Q99932 426 aaPredicted RBP10.87□□□□□ -0.67
NPC1-207ENST00000588867 MCRIP2Q9BUT9 160 aaKnown RBP10.87□□□□□ -0.67
NPC1-207ENST00000588867 PRELID1Q9Y255 219 aa10.87□□□□□ -0.67
NPC1-207ENST00000588867 TMEM218A2RU14 115 aa10.87□□□□□ -0.67
NPC1-207ENST00000588867 PEX7O00628 323 aa10.87□□□□□ -0.67
NPC1-207ENST00000588867 TCRAP04437 139 aa10.87□□□□□ -0.67
NPC1-207ENST00000588867 IGLL1P15814 213 aa10.87□□□□□ -0.67
NPC1-207ENST00000588867 SNRPD3P62318 126 aaKnown RBP10.87□□□□□ -0.67
NPC1-207ENST00000588867 GOLT1AQ6ZVE7 132 aa10.87□□□□□ -0.67
NPC1-207ENST00000588867 HIST1H2BAQ96A08 127 aa10.87□□□□□ -0.67
NPC1-207ENST00000588867 SGK494Q96LW2 274 aa10.87□□□□□ -0.67
NPC1-207ENST00000588867 LINC00479Q96M42 142 aa10.87□□□□□ -0.67
NPC1-207ENST00000588867 CLEC5AQ9NY25 188 aa10.87□□□□□ -0.67
NPC1-207ENST00000588867 VWFP04275 2813 aa10.86□□□□□ -0.67
NPC1-207ENST00000588867 OR4C46A6NHA9 309 aa10.86□□□□□ -0.67
NPC1-207ENST00000588867 DIRC3C9JPN6 131 aa10.86□□□□□ -0.67
NPC1-207ENST00000588867 INSL3P51460 131 aa10.86□□□□□ -0.67
NPC1-207ENST00000588867 PSMG4Q5JS54 123 aa10.86□□□□□ -0.67
NPC1-207ENST00000588867 SOHLH1Q5JUK2 328 aa10.86□□□□□ -0.67
NPC1-207ENST00000588867 TCEAL7Q9BRU2 100 aa10.86□□□□□ -0.67
NPC1-207ENST00000588867 ATG101Q9BSB4 218 aa10.86□□□□□ -0.67
NPC1-207ENST00000588867 DERL1Q9BUN8 251 aa10.86□□□□□ -0.67
NPC1-207ENST00000588867 SORL1Q92673 2214 aa10.86□□□□□ -0.67
NPC1-207ENST00000588867 TRAV34A0A0B4J273 112 aa10.85□□□□□ -0.67
NPC1-207ENST00000588867 PRAC2D3DTV9 90 aa10.85□□□□□ -0.67
NPC1-207ENST00000588867 AKR1C3P42330 323 aa10.85□□□□□ -0.67
NPC1-207ENST00000588867 OR2K2Q8NGT1 345 aa10.85□□□□□ -0.67
NPC1-207ENST00000588867 TRAV2A0A0B4J234 112 aa10.85□□□□□ -0.67
NPC1-207ENST00000588867 F8W036 122 aa10.85□□□□□ -0.67
NPC1-207ENST00000588867 DEFB1P60022 68 aa10.85□□□□□ -0.67
NPC1-207ENST00000588867 C11orf52Q96A22 123 aa10.85□□□□□ -0.67
NPC1-207ENST00000588867 PARLQ9H300 379 aa10.85□□□□□ -0.67
NPC1-207ENST00000588867 ZNF256Q9Y2P7 627 aaPredicted RBP10.85□□□□□ -0.67
NPC1-207ENST00000588867 IGKV2-40A0A087WW87 121 aaPredicted RBP10.84□□□□□ -0.67
NPC1-207ENST00000588867 K7EQM0 130 aa10.84□□□□□ -0.67
NPC1-207ENST00000588867 IGKV2D-40P01614 121 aaPredicted RBP10.84□□□□□ -0.67
NPC1-207ENST00000588867 RPL35P42766 123 aaKnown RBP10.84□□□□□ -0.67
NPC1-207ENST00000588867 CNN1P51911 297 aaKnown RBP10.84□□□□□ -0.67
NPC1-207ENST00000588867 C2CD4CQ8TF44 421 aa10.84□□□□□ -0.67
NPC1-207ENST00000588867 MRPL53Q96EL3 112 aaKnown RBP10.84□□□□□ -0.67
NPC1-207ENST00000588867 NOTCH3Q9UM47 2321 aa10.84□□□□□ -0.67
NPC1-207ENST00000588867 TRAV8-1A0A0A6YYK1 113 aa10.84□□□□□ -0.67
NPC1-207ENST00000588867 ZNF727A8MUV8 499 aa10.84□□□□□ -0.67
NPC1-207ENST00000588867 NDUFS6O75380 124 aaKnown RBP10.84□□□□□ -0.67
NPC1-207ENST00000588867 ZNF705DP0CH99 300 aaPredicted RBP10.84□□□□□ -0.67
NPC1-207ENST00000588867 ZNF705BP0CI00 300 aaPredicted RBP10.84□□□□□ -0.67
NPC1-207ENST00000588867 UBE2G1P62253 170 aa10.84□□□□□ -0.67
NPC1-207ENST00000588867 SMIM7Q9BQ49 75 aa10.84□□□□□ -0.67
NPC1-207ENST00000588867 F6UB75 175 aa10.83□□□□□ -0.68
NPC1-207ENST00000588867 DEFB131AP59861 70 aa10.83□□□□□ -0.68
NPC1-207ENST00000588867 ARL6IP6Q8N6S5 226 aa10.83□□□□□ -0.68
NPC1-207ENST00000588867 ERCC8Q13216 396 aa10.82□□□□□ -0.68
NPC1-207ENST00000588867 VGLL1Q99990 258 aa10.82□□□□□ -0.68
NPC1-207ENST00000588867 ADCYAP1P18509 176 aa10.82□□□□□ -0.68
NPC1-207ENST00000588867 PRR31Q5SQ13 230 aa10.82□□□□□ -0.68
NPC1-207ENST00000588867 OR10J6PQ8NGY7 276 aa10.82□□□□□ -0.68
NPC1-207ENST00000588867 SERTM2A0A1B0GWG4 89 aa10.81□□□□□ -0.68
NPC1-207ENST00000588867 KRBOX1C9JBD0 128 aa10.81□□□□□ -0.68
NPC1-207ENST00000588867 HIST1H1AQ02539 215 aaPredicted RBP10.81□□□□□ -0.68
NPC1-207ENST00000588867 TMEM183BQ1AE95 376 aa10.81□□□□□ -0.68
NPC1-207ENST00000588867 PRNTQ86SH4 94 aa10.81□□□□□ -0.68
NPC1-207ENST00000588867 FMC1Q96HJ9 113 aa10.81□□□□□ -0.68
NPC1-207ENST00000588867 ASCL2Q99929 193 aa10.81□□□□□ -0.68
NPC1-207ENST00000588867 SEC11CQ9BY50 192 aa10.81□□□□□ -0.68
NPC1-207ENST00000588867 MAP6D1Q9H9H5 199 aa10.81□□□□□ -0.68
NPC1-207ENST00000588867 FLI1Q01543 452 aaPredicted RBP10.8□□□□□ -0.68
NPC1-207ENST00000588867 OXLD1Q5BKU9 147 aa10.8□□□□□ -0.68
NPC1-207ENST00000588867 EBLN2Q6P2I7 272 aa10.8□□□□□ -0.68
NPC1-207ENST00000588867 APRG1Q8IVJ8 170 aa10.8□□□□□ -0.68
NPC1-207ENST00000588867 TMEM75Q8N9X5 138 aa10.8□□□□□ -0.68
NPC1-207ENST00000588867 OR8A1Q8NGG7 326 aa10.8□□□□□ -0.68
NPC1-207ENST00000588867 PSG8Q9UQ74 426 aa10.8□□□□□ -0.68
NPC1-207ENST00000588867 KLF12Q9Y4X4 402 aa10.8□□□□□ -0.68
NPC1-207ENST00000588867 TRRAPQ9Y4A5 3859 aa10.8□□□□□ -0.68
NPC1-207ENST00000588867 PGPEP1LA6NFU8 196 aa10.8□□□□□ -0.68
NPC1-207ENST00000588867 IGLV2-11P01706 119 aa10.8□□□□□ -0.68
NPC1-207ENST00000588867 S100A9P06702 114 aaKnown RBP10.8□□□□□ -0.68
NPC1-207ENST00000588867 CD7P09564 240 aa10.8□□□□□ -0.68
NPC1-207ENST00000588867 GNG4P50150 75 aa10.8□□□□□ -0.68
NPC1-207ENST00000588867 TAS2R60P59551 318 aa10.8□□□□□ -0.68
NPC1-207ENST00000588867 ZNF124Q15973 351 aa10.8□□□□□ -0.68
NPC1-207ENST00000588867 BEAN1Q3B7T3 259 aa10.8□□□□□ -0.68
NPC1-207ENST00000588867 FAM74A3Q4VXF1 159 aa10.8□□□□□ -0.68
NPC1-207ENST00000588867 CENPWQ5EE01 88 aa10.8□□□□□ -0.68
NPC1-207ENST00000588867 GDF5OSQ5U4N7 250 aa10.8□□□□□ -0.68
NPC1-207ENST00000588867 NIPSNAP3BQ9BS92 247 aa10.8□□□□□ -0.68
NPC1-207ENST00000588867 AGPAT4-IT1Q9H0P7 198 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms