RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 IGFL4Q6B9Z1 124 aa16.82■□□□□ 0.28
ATG4D-209ENST00000588857 DYNLRB2Q8TF09 96 aa16.82■□□□□ 0.28
ATG4D-209ENST00000588857 CLEC5AQ9NY25 188 aa16.82■□□□□ 0.28
ATG4D-209ENST00000588857 PRELID1Q9Y255 219 aa16.82■□□□□ 0.28
ATG4D-209ENST00000588857 M0R3E3 92 aa16.81■□□□□ 0.28
ATG4D-209ENST00000588857 PF4P02776 101 aa16.81■□□□□ 0.28
ATG4D-209ENST00000588857 TMEM241Q24JQ0 296 aa16.81■□□□□ 0.28
ATG4D-209ENST00000588857 SAMD13Q5VXD3 122 aa16.81■□□□□ 0.28
ATG4D-209ENST00000588857 NAT8Q9UHE5 227 aa16.81■□□□□ 0.28
ATG4D-209ENST00000588857 K7EQM0 130 aa16.81■□□□□ 0.28
ATG4D-209ENST00000588857 GBGT1Q8N5D6 347 aa16.81■□□□□ 0.28
ATG4D-209ENST00000588857 RNF182Q8N6D2 247 aa16.81■□□□□ 0.28
ATG4D-209ENST00000588857 ARL6IP6Q8N6S5 226 aa16.81■□□□□ 0.28
ATG4D-209ENST00000588857 ZNF747Q9BV97 191 aa16.81■□□□□ 0.28
ATG4D-209ENST00000588857 TRAV8-2A0A0B4J237 113 aa16.8■□□□□ 0.28
ATG4D-209ENST00000588857 HLA-DMBP28068 263 aa16.8■□□□□ 0.28
ATG4D-209ENST00000588857 GOLT1AQ6ZVE7 132 aa16.8■□□□□ 0.28
ATG4D-209ENST00000588857 TVP23CQ96ET8 276 aa16.8■□□□□ 0.28
ATG4D-209ENST00000588857 LINC00479Q96M42 142 aa16.8■□□□□ 0.28
ATG4D-209ENST00000588857 DIRC3C9JPN6 131 aa16.79■□□□□ 0.28
ATG4D-209ENST00000588857 DNASE2O00115 360 aaPredicted RBP16.79■□□□□ 0.28
ATG4D-209ENST00000588857 ISLRO14498 428 aa16.79■□□□□ 0.28
ATG4D-209ENST00000588857 S100A9P06702 114 aaKnown RBP16.79■□□□□ 0.28
ATG4D-209ENST00000588857 UBE2G1P62253 170 aa16.79■□□□□ 0.28
ATG4D-209ENST00000588857 LCN12Q6JVE5 192 aa16.79■□□□□ 0.28
ATG4D-209ENST00000588857 MS4A6AQ9H2W1 248 aa16.79■□□□□ 0.28
ATG4D-209ENST00000588857 M0R036 132 aa16.78■□□□□ 0.28
ATG4D-209ENST00000588857 SOCS3O14543 225 aa16.78■□□□□ 0.28
ATG4D-209ENST00000588857 SNAPINO95295 136 aa16.78■□□□□ 0.28
ATG4D-209ENST00000588857 ID1P41134 155 aa16.78■□□□□ 0.28
ATG4D-209ENST00000588857 TAS2R60P59551 318 aa16.78■□□□□ 0.28
ATG4D-209ENST00000588857 PAFAH1B2P68402 229 aa16.78■□□□□ 0.28
ATG4D-209ENST00000588857 RBPMS2Q6ZRY4 209 aaKnown RBP16.78■□□□□ 0.28
ATG4D-209ENST00000588857 WFDC3Q8IUB2 231 aa16.78■□□□□ 0.28
ATG4D-209ENST00000588857 FMC1Q96HJ9 113 aa16.78■□□□□ 0.28
ATG4D-209ENST00000588857 SIGLEC8Q9NYZ4 499 aa16.78■□□□□ 0.28
ATG4D-209ENST00000588857 TRAV34A0A0B4J273 112 aa16.77■□□□□ 0.28
ATG4D-209ENST00000588857 SERTM2A0A1B0GWG4 89 aa16.77■□□□□ 0.28
ATG4D-209ENST00000588857 ZNF705FA8MVS1 300 aaPredicted RBP16.77■□□□□ 0.28
ATG4D-209ENST00000588857 GNG4P50150 75 aa16.77■□□□□ 0.28
ATG4D-209ENST00000588857 PSG3Q16557 428 aa16.77■□□□□ 0.28
ATG4D-209ENST00000588857 TMEM183BQ1AE95 376 aa16.77■□□□□ 0.28
ATG4D-209ENST00000588857 MRPL53Q96EL3 112 aaKnown RBP16.77■□□□□ 0.28
ATG4D-209ENST00000588857 SDF2L1Q9HCN8 221 aa16.77■□□□□ 0.28
ATG4D-209ENST00000588857 KLF12Q9Y4X4 402 aa16.77■□□□□ 0.28
ATG4D-209ENST00000588857 C9JCJ5 164 aa16.77■□□□□ 0.27
ATG4D-209ENST00000588857 TFPI2P48307 235 aa16.77■□□□□ 0.27
ATG4D-209ENST00000588857 PNRC1Q12796 327 aaPredicted RBP16.77■□□□□ 0.27
ATG4D-209ENST00000588857 DEFB114Q30KQ6 69 aa16.77■□□□□ 0.27
ATG4D-209ENST00000588857 CENPWQ5EE01 88 aa16.77■□□□□ 0.27
ATG4D-209ENST00000588857 CLRN3Q8NCR9 226 aa16.77■□□□□ 0.27
ATG4D-209ENST00000588857 DCANP1Q8TF63 244 aa16.77■□□□□ 0.27
ATG4D-209ENST00000588857 TRBV20OR9-2A0A075B6H5 130 aa16.76■□□□□ 0.27
ATG4D-209ENST00000588857 SHISA2Q6UWI4 295 aa16.76■□□□□ 0.27
ATG4D-209ENST00000588857 SGK494Q96LW2 274 aa16.76■□□□□ 0.27
ATG4D-209ENST00000588857 FBN3Q75N90 2809 aa16.75■□□□□ 0.27
ATG4D-209ENST00000588857 ADIRFQ15847 76 aa16.75■□□□□ 0.27
ATG4D-209ENST00000588857 TMEM75Q8N9X5 138 aa16.75■□□□□ 0.27
ATG4D-209ENST00000588857 ZNF738Q8NE65 137 aa16.75■□□□□ 0.27
ATG4D-209ENST00000588857 SAP30O75446 220 aa16.74■□□□□ 0.27
ATG4D-209ENST00000588857 PRB4P10163 310 aaPredicted RBP16.74■□□□□ 0.27
ATG4D-209ENST00000588857 TMEM61Q8N0U2 210 aa16.74■□□□□ 0.27
ATG4D-209ENST00000588857 LINC00482Q8N8I6 264 aa16.74■□□□□ 0.27
ATG4D-209ENST00000588857 C20orf173Q96LM9 149 aa16.74■□□□□ 0.27
ATG4D-209ENST00000588857 IGKV2-40A0A087WW87 121 aaPredicted RBP16.73■□□□□ 0.27
ATG4D-209ENST00000588857 PGPEP1LA6NFU8 196 aa16.73■□□□□ 0.27
ATG4D-209ENST00000588857 K7EQG2 157 aa16.73■□□□□ 0.27
ATG4D-209ENST00000588857 IGKV2D-40P01614 121 aaPredicted RBP16.73■□□□□ 0.27
ATG4D-209ENST00000588857 SNRPD3P62318 126 aaKnown RBP16.73■□□□□ 0.27
ATG4D-209ENST00000588857 RPL23P62829 140 aaKnown RBP16.73■□□□□ 0.27
ATG4D-209ENST00000588857 CD300EQ496F6 205 aaPredicted RBP16.73■□□□□ 0.27
ATG4D-209ENST00000588857 BAGE2Q86Y30 109 aa16.73■□□□□ 0.27
ATG4D-209ENST00000588857 IGF2BP2-AS1Q96M15 143 aa16.73■□□□□ 0.27
ATG4D-209ENST00000588857 TRAV8-1A0A0A6YYK1 113 aa16.72■□□□□ 0.27
ATG4D-209ENST00000588857 TSPAN4O14817 238 aa16.72■□□□□ 0.27
ATG4D-209ENST00000588857 LINC01551Q86U37 167 aa16.72■□□□□ 0.27
ATG4D-209ENST00000588857 OCC1Q8TAD7 63 aa16.72■□□□□ 0.27
ATG4D-209ENST00000588857 LY96Q9Y6Y9 160 aa16.72■□□□□ 0.27
ATG4D-209ENST00000588857 TRAV25A0A0B4J276 109 aa16.72■□□□□ 0.27
ATG4D-209ENST00000588857 RBAKDNA6NC62 111 aa16.72■□□□□ 0.27
ATG4D-209ENST00000588857 FBLL1A6NHQ2 334 aaKnown RBP16.72■□□□□ 0.27
ATG4D-209ENST00000588857 FLI1Q01543 452 aaPredicted RBP16.72■□□□□ 0.27
ATG4D-209ENST00000588857 PRNTQ86SH4 94 aa16.72■□□□□ 0.27
ATG4D-209ENST00000588857 AURKAIP1Q9NWT8 199 aaPredicted RBP16.72■□□□□ 0.27
ATG4D-209ENST00000588857 PSG8Q9UQ74 426 aa16.72■□□□□ 0.27
ATG4D-209ENST00000588857 TRAV2A0A0B4J234 112 aa16.71■□□□□ 0.27
ATG4D-209ENST00000588857 TRBV6-1A0A0K0K1D8 114 aa16.71■□□□□ 0.27
ATG4D-209ENST00000588857 B4DEV8 164 aa16.71■□□□□ 0.27
ATG4D-209ENST00000588857 PRAC2D3DTV9 90 aa16.71■□□□□ 0.27
ATG4D-209ENST00000588857 IGLV2-11P01706 119 aa16.71■□□□□ 0.27
ATG4D-209ENST00000588857 RHEBQ15382 184 aa16.71■□□□□ 0.27
ATG4D-209ENST00000588857 Q86TA4 180 aa16.71■□□□□ 0.27
ATG4D-209ENST00000588857 LTAP01374 205 aa16.7■□□□□ 0.26
ATG4D-209ENST00000588857 ZNF688P0C7X2 276 aa16.7■□□□□ 0.26
ATG4D-209ENST00000588857 ATRAIDQ6UW56 229 aa16.7■□□□□ 0.26
ATG4D-209ENST00000588857 C7orf77A4D0Y5 90 aa16.69■□□□□ 0.26
ATG4D-209ENST00000588857 SPAG8Q99932 426 aaPredicted RBP16.69■□□□□ 0.26
ATG4D-209ENST00000588857 VGLL1Q99990 258 aa16.69■□□□□ 0.26
ATG4D-209ENST00000588857 RPS10P5Q9NQ39 176 aa16.69■□□□□ 0.26
ATG4D-209ENST00000588857 MGST1P10620 155 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms