RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 RPH3ALQ9UNE2 315 aa16.93■□□□□ 0.3
ACTN4-210ENST00000588618 WIPF1O43516 503 aa16.93■□□□□ 0.3
ACTN4-210ENST00000588618 PSG3Q16557 428 aa16.93■□□□□ 0.3
ACTN4-210ENST00000588618 OXLD1Q5BKU9 147 aa16.93■□□□□ 0.3
ACTN4-210ENST00000588618 ZNF506Q5JVG8 444 aa16.93■□□□□ 0.3
ACTN4-210ENST00000588618 COMMD7Q86VX2 200 aa16.93■□□□□ 0.3
ACTN4-210ENST00000588618 CCDC28AQ8IWP9 274 aa16.93■□□□□ 0.3
ACTN4-210ENST00000588618 C5orf17Q8NAS9 161 aa16.93■□□□□ 0.3
ACTN4-210ENST00000588618 ZNF256Q9Y2P7 627 aaPredicted RBP16.93■□□□□ 0.3
ACTN4-210ENST00000588618 C9JQL5 133 aa16.92■□□□□ 0.3
ACTN4-210ENST00000588618 M0R3E3 92 aa16.92■□□□□ 0.3
ACTN4-210ENST00000588618 CD81P60033 236 aa16.92■□□□□ 0.3
ACTN4-210ENST00000588618 PEA15Q15121 130 aa16.92■□□□□ 0.3
ACTN4-210ENST00000588618 ZMAT5Q9UDW3 170 aaKnown RBP16.92■□□□□ 0.3
ACTN4-210ENST00000588618 F6UZH7 168 aa16.91■□□□□ 0.3
ACTN4-210ENST00000588618 GTSCR1Q86UQ5 136 aa16.91■□□□□ 0.3
ACTN4-210ENST00000588618 MRPL53Q96EL3 112 aaKnown RBP16.91■□□□□ 0.3
ACTN4-210ENST00000588618 C20orf173Q96LM9 149 aa16.91■□□□□ 0.3
ACTN4-210ENST00000588618 TCEAL7Q9BRU2 100 aa16.91■□□□□ 0.3
ACTN4-210ENST00000588618 RAB19A4D1S5 217 aa16.9■□□□□ 0.3
ACTN4-210ENST00000588618 PDE6DO43924 150 aa16.9■□□□□ 0.3
ACTN4-210ENST00000588618 CMC4P56277 68 aaPredicted RBP16.9■□□□□ 0.3
ACTN4-210ENST00000588618 SLC7A5P1Q8MH63 180 aa16.9■□□□□ 0.3
ACTN4-210ENST00000588618 RPUSD4Q96CM3 377 aaKnown RBP16.9■□□□□ 0.3
ACTN4-210ENST00000588618 ZNF705FA8MVS1 300 aaPredicted RBP16.89■□□□□ 0.29
ACTN4-210ENST00000588618 K7EQM0 130 aa16.89■□□□□ 0.29
ACTN4-210ENST00000588618 DEFB131AP59861 70 aa16.89■□□□□ 0.29
ACTN4-210ENST00000588618 HIST1H2BAQ96A08 127 aa16.89■□□□□ 0.29
ACTN4-210ENST00000588618 EPDR1Q9UM22 224 aa16.89■□□□□ 0.29
ACTN4-210ENST00000588618 OR11H12B2RN74 326 aa16.88■□□□□ 0.29
ACTN4-210ENST00000588618 GNG5P63218 68 aa16.88■□□□□ 0.29
ACTN4-210ENST00000588618 BEAN1Q3B7T3 259 aa16.88■□□□□ 0.29
ACTN4-210ENST00000588618 ARL6IP6Q8N6S5 226 aa16.87■□□□□ 0.29
ACTN4-210ENST00000588618 ATG101Q9BSB4 218 aa16.87■□□□□ 0.29
ACTN4-210ENST00000588618 SMDT1Q9H4I9 107 aa16.87■□□□□ 0.29
ACTN4-210ENST00000588618 MAP6D1Q9H9H5 199 aa16.87■□□□□ 0.29
ACTN4-210ENST00000588618 TREM1Q9NP99 234 aa16.87■□□□□ 0.29
ACTN4-210ENST00000588618 DIRC3C9JPN6 131 aa16.87■□□□□ 0.29
ACTN4-210ENST00000588618 PEX7O00628 323 aa16.87■□□□□ 0.29
ACTN4-210ENST00000588618 TCRAP04437 139 aa16.87■□□□□ 0.29
ACTN4-210ENST00000588618 DEFB1P60022 68 aa16.87■□□□□ 0.29
ACTN4-210ENST00000588618 SCO2A0A1W2PP80 73 aa16.86■□□□□ 0.29
ACTN4-210ENST00000588618 CEBPGP53567 150 aa16.86■□□□□ 0.29
ACTN4-210ENST00000588618 EBLN2Q6P2I7 272 aa16.86■□□□□ 0.29
ACTN4-210ENST00000588618 GOLT1AQ6ZVE7 132 aa16.86■□□□□ 0.29
ACTN4-210ENST00000588618 OR10J6PQ8NGY7 276 aa16.86■□□□□ 0.29
ACTN4-210ENST00000588618 AGRNO00468 2067 aa16.86■□□□□ 0.29
ACTN4-210ENST00000588618 DNAH3Q8TD57 4116 aa16.86■□□□□ 0.29
ACTN4-210ENST00000588618 SERTM2A0A1B0GWG4 89 aa16.85■□□□□ 0.29
ACTN4-210ENST00000588618 PRAC2D3DTV9 90 aa16.85■□□□□ 0.29
ACTN4-210ENST00000588618 CD7P09564 240 aa16.85■□□□□ 0.29
ACTN4-210ENST00000588618 EIF4E3Q8N5X7 224 aaKnown RBP16.85■□□□□ 0.29
ACTN4-210ENST00000588618 CYB561D1Q8N8Q1 229 aa16.85■□□□□ 0.29
ACTN4-210ENST00000588618 G3V4G9 280 aa16.84■□□□□ 0.29
ACTN4-210ENST00000588618 SRP19P09132 144 aaKnown RBP16.84■□□□□ 0.29
ACTN4-210ENST00000588618 AKR1C3P42330 323 aa16.84■□□□□ 0.29
ACTN4-210ENST00000588618 ODF3L2Q3SX64 289 aa16.84■□□□□ 0.29
ACTN4-210ENST00000588618 FAM110AQ9BQ89 295 aa16.84■□□□□ 0.29
ACTN4-210ENST00000588618 TMEM250H0YL14 139 aa16.84■□□□□ 0.29
ACTN4-210ENST00000588618 NDUFA5Q16718 116 aa16.84■□□□□ 0.29
ACTN4-210ENST00000588618 UQCC3Q6UW78 93 aa16.84■□□□□ 0.29
ACTN4-210ENST00000588618 IGKV2-40A0A087WW87 121 aaPredicted RBP16.83■□□□□ 0.28
ACTN4-210ENST00000588618 IGKV2D-40P01614 121 aaPredicted RBP16.83■□□□□ 0.28
ACTN4-210ENST00000588618 CNN1P51911 297 aaKnown RBP16.83■□□□□ 0.28
ACTN4-210ENST00000588618 UBE2G1P62253 170 aa16.83■□□□□ 0.28
ACTN4-210ENST00000588618 HIST1H1AQ02539 215 aaPredicted RBP16.83■□□□□ 0.28
ACTN4-210ENST00000588618 FOXI2Q6ZQN5 318 aa16.83■□□□□ 0.28
ACTN4-210ENST00000588618 APRG1Q8IVJ8 170 aa16.83■□□□□ 0.28
ACTN4-210ENST00000588618 F6UB75 175 aa16.82■□□□□ 0.28
ACTN4-210ENST00000588618 NDUFS6O75380 124 aaKnown RBP16.82■□□□□ 0.28
ACTN4-210ENST00000588618 OR8A1Q8NGG7 326 aa16.82■□□□□ 0.28
ACTN4-210ENST00000588618 C11orf52Q96A22 123 aa16.82■□□□□ 0.28
ACTN4-210ENST00000588618 LINC00479Q96M42 142 aa16.82■□□□□ 0.28
ACTN4-210ENST00000588618 DERL1Q9BUN8 251 aa16.82■□□□□ 0.28
ACTN4-210ENST00000588618 MGAM2Q2M2H8 2515 aa16.82■□□□□ 0.28
ACTN4-210ENST00000588618 EGFEM1PQ0D2K5 195 aa16.82■□□□□ 0.28
ACTN4-210ENST00000588618 ACTL10Q5JWF8 245 aa16.82■□□□□ 0.28
ACTN4-210ENST00000588618 SAMD5Q5TGI4 173 aa16.82■□□□□ 0.28
ACTN4-210ENST00000588618 SLC35B3Q9H1N7 401 aa16.82■□□□□ 0.28
ACTN4-210ENST00000588618 RBAKDNA6NC62 111 aa16.81■□□□□ 0.28
ACTN4-210ENST00000588618 ZNF705DP0CH99 300 aaPredicted RBP16.81■□□□□ 0.28
ACTN4-210ENST00000588618 ZNF705BP0CI00 300 aaPredicted RBP16.81■□□□□ 0.28
ACTN4-210ENST00000588618 TMEM78Q5T7P6 136 aa16.81■□□□□ 0.28
ACTN4-210ENST00000588618 C2CD4CQ8TF44 421 aa16.81■□□□□ 0.28
ACTN4-210ENST00000588618 SAV1Q9H4B6 383 aaPredicted RBP16.81■□□□□ 0.28
ACTN4-210ENST00000588618 NOTCH1P46531 2555 aa16.8■□□□□ 0.28
ACTN4-210ENST00000588618 NBEAL1Q6ZS30 2694 aa16.8■□□□□ 0.28
ACTN4-210ENST00000588618 CITED4Q96RK1 184 aa16.8■□□□□ 0.28
ACTN4-210ENST00000588618 DUSP14O95147 198 aaKnown RBP16.79■□□□□ 0.28
ACTN4-210ENST00000588618 ZNF124Q15973 351 aa16.79■□□□□ 0.28
ACTN4-210ENST00000588618 ZNF674Q2M3X9 581 aa16.79■□□□□ 0.28
ACTN4-210ENST00000588618 GDF5OSQ5U4N7 250 aa16.79■□□□□ 0.28
ACTN4-210ENST00000588618 STHQ8IWL8 128 aa16.79■□□□□ 0.28
ACTN4-210ENST00000588618 TMEM75Q8N9X5 138 aa16.79■□□□□ 0.28
ACTN4-210ENST00000588618 OR4B1Q8NGF8 309 aa16.79■□□□□ 0.28
ACTN4-210ENST00000588618 FMC1Q96HJ9 113 aa16.79■□□□□ 0.28
ACTN4-210ENST00000588618 SGK494Q96LW2 274 aa16.79■□□□□ 0.28
ACTN4-210ENST00000588618 PRR25Q96S07 402 aa16.79■□□□□ 0.28
ACTN4-210ENST00000588618 PPP1R14DQ9NXH3 145 aa16.79■□□□□ 0.28
ACTN4-210ENST00000588618 TRAV8-1A0A0A6YYK1 113 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms