RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 KHDC3LQ587J8 217 aa14.67□□□□□ -0.06
DDX39A-207ENST00000588542 MUC7Q8TAX7 377 aa14.67□□□□□ -0.06
DDX39A-207ENST00000588542 GNPNAT1Q96EK6 184 aaPredicted RBP14.67□□□□□ -0.06
DDX39A-207ENST00000588542 hCG_2014768A0A024R1R8 64 aa14.66□□□□□ -0.06
DDX39A-207ENST00000588542 A0A1W2PPV4 95 aa14.66□□□□□ -0.06
DDX39A-207ENST00000588542 M0R3E3 92 aa14.66□□□□□ -0.06
DDX39A-207ENST00000588542 TAS2R45P59539 299 aa14.66□□□□□ -0.06
DDX39A-207ENST00000588542 TCTE3Q8IZS6 198 aa14.66□□□□□ -0.06
DDX39A-207ENST00000588542 EXOC3-AS1Q8N2X6 119 aa14.66□□□□□ -0.06
DDX39A-207ENST00000588542 MRPL53Q96EL3 112 aaKnown RBP14.66□□□□□ -0.06
DDX39A-207ENST00000588542 PHYHIPLQ96FC7 376 aa14.66□□□□□ -0.06
DDX39A-207ENST00000588542 X6R8D5 127 aa14.66□□□□□ -0.06
DDX39A-207ENST00000588542 ARPC5LQ9BPX5 153 aa14.65□□□□□ -0.06
DDX39A-207ENST00000588542 A0A0D9SG52 128 aa14.64□□□□□ -0.07
DDX39A-207ENST00000588542 HMGB3O15347 200 aaKnown RBP14.64□□□□□ -0.07
DDX39A-207ENST00000588542 MBP02144 154 aa14.64□□□□□ -0.07
DDX39A-207ENST00000588542 CDC34P49427 236 aaPredicted RBP14.64□□□□□ -0.07
DDX39A-207ENST00000588542 UBE2L3P68036 154 aaKnown RBP14.64□□□□□ -0.07
DDX39A-207ENST00000588542 Q8NAQ8 132 aa14.64□□□□□ -0.07
DDX39A-207ENST00000588542 PRELID1Q9Y255 219 aa14.64□□□□□ -0.07
DDX39A-207ENST00000588542 M0R2Z0 102 aa14.63□□□□□ -0.07
DDX39A-207ENST00000588542 CRXO43186 299 aaPredicted RBP14.63□□□□□ -0.07
DDX39A-207ENST00000588542 ICAM4Q14773 271 aa14.63□□□□□ -0.07
DDX39A-207ENST00000588542 SPINK13Q1W4C9 94 aa14.63□□□□□ -0.07
DDX39A-207ENST00000588542 ZNF705AQ6ZN79 300 aaPredicted RBP14.63□□□□□ -0.07
DDX39A-207ENST00000588542 PQLC2Q6ZP29 291 aa14.63□□□□□ -0.07
DDX39A-207ENST00000588542 RAB24Q969Q5 203 aa14.63□□□□□ -0.07
DDX39A-207ENST00000588542 STAG3L2P0CL84 134 aa14.62□□□□□ -0.07
DDX39A-207ENST00000588542 STAG3L3P0CL85 134 aa14.62□□□□□ -0.07
DDX39A-207ENST00000588542 SSX7Q7RTT5 188 aa14.62□□□□□ -0.07
DDX39A-207ENST00000588542 C1orf158Q8N1D5 194 aa14.62□□□□□ -0.07
DDX39A-207ENST00000588542 OR10J6PQ8NGY7 276 aa14.62□□□□□ -0.07
DDX39A-207ENST00000588542 C11orf68Q9H3H3 251 aaKnown RBP14.62□□□□□ -0.07
DDX39A-207ENST00000588542 AAMDCQ9H7C9 122 aa14.62□□□□□ -0.07
DDX39A-207ENST00000588542 A0A1B0GVG6 124 aa14.61□□□□□ -0.07
DDX39A-207ENST00000588542 NPIPB6E9PJ23 425 aa14.61□□□□□ -0.07
DDX39A-207ENST00000588542 C3orf84H3BNL1 204 aa14.61□□□□□ -0.07
DDX39A-207ENST00000588542 BOLA2-SMG1P6H3BVE0 249 aa14.61□□□□□ -0.07
DDX39A-207ENST00000588542 BCL2L11O43521 198 aa14.61□□□□□ -0.07
DDX39A-207ENST00000588542 AMBPP02760 352 aa14.61□□□□□ -0.07
DDX39A-207ENST00000588542 ARL14EPLP0DKL9 152 aa14.61□□□□□ -0.07
DDX39A-207ENST00000588542 LYPD1Q8N2G4 141 aa14.61□□□□□ -0.07
DDX39A-207ENST00000588542 IGF2BP2-AS1Q96M15 143 aa14.61□□□□□ -0.07
DDX39A-207ENST00000588542 IGHV4-28A0A0C4DH34 117 aa14.6□□□□□ -0.07
DDX39A-207ENST00000588542 DEFB4AO15263 64 aa14.6□□□□□ -0.07
DDX39A-207ENST00000588542 RBMY1A1P0DJD3 496 aaKnown RBP14.6□□□□□ -0.07
DDX39A-207ENST00000588542 RBMY1CP0DJD4 496 aa14.6□□□□□ -0.07
DDX39A-207ENST00000588542 MIFP14174 115 aa14.6□□□□□ -0.07
DDX39A-207ENST00000588542 RANP62826 216 aaKnown RBP14.6□□□□□ -0.07
DDX39A-207ENST00000588542 RBMY1FQ15415 496 aaKnown RBP14.6□□□□□ -0.07
DDX39A-207ENST00000588542 ZNF726P1Q15940 193 aa14.6□□□□□ -0.07
DDX39A-207ENST00000588542 TMUB2Q71RG4 321 aa14.6□□□□□ -0.07
DDX39A-207ENST00000588542 IL17DQ8TAD2 202 aa14.6□□□□□ -0.07
DDX39A-207ENST00000588542 ACTR3CQ9C0K3 210 aaPredicted RBP14.6□□□□□ -0.07
DDX39A-207ENST00000588542 Q9H3A6 140 aa14.6□□□□□ -0.07
DDX39A-207ENST00000588542 C1QBP02746 253 aa14.59□□□□□ -0.07
DDX39A-207ENST00000588542 CT45A10P0DMU9 189 aa14.59□□□□□ -0.07
DDX39A-207ENST00000588542 AKAP14Q86UN6 197 aa14.59□□□□□ -0.07
DDX39A-207ENST00000588542 BAP18Q8IXM2 172 aa14.59□□□□□ -0.07
DDX39A-207ENST00000588542 SUN5Q8TC36 379 aa14.59□□□□□ -0.07
DDX39A-207ENST00000588542 NEU1Q99519 415 aa14.59□□□□□ -0.07
DDX39A-207ENST00000588542 DYNC2H1Q8NCM8 4307 aaKnown RBP14.59□□□□□ -0.07
DDX39A-207ENST00000588542 TENM2Q9NT68 2774 aa14.59□□□□□ -0.07
DDX39A-207ENST00000588542 TRAV12-2A0A075B6T6 113 aa14.58□□□□□ -0.08
DDX39A-207ENST00000588542 KANTRA0A1W2PQU2 76 aa14.58□□□□□ -0.08
DDX39A-207ENST00000588542 CD300CQ08708 224 aa14.58□□□□□ -0.08
DDX39A-207ENST00000588542 ERCC8Q13216 396 aa14.58□□□□□ -0.08
DDX39A-207ENST00000588542 LGALSLQ3ZCW2 172 aaPredicted RBP14.58□□□□□ -0.08
DDX39A-207ENST00000588542 CASC10Q5T4H9 136 aa14.58□□□□□ -0.08
DDX39A-207ENST00000588542 ZNF471Q9BX82 626 aaPredicted RBP14.58□□□□□ -0.08
DDX39A-207ENST00000588542 PPP1R14DQ9NXH3 145 aa14.58□□□□□ -0.08
DDX39A-207ENST00000588542 PLA2G2EQ9NZK7 142 aa14.58□□□□□ -0.08
DDX39A-207ENST00000588542 IGHV3OR16-12A0A075B7B8 117 aa14.57□□□□□ -0.08
DDX39A-207ENST00000588542 IGKV2-40A0A087WW87 121 aaPredicted RBP14.57□□□□□ -0.08
DDX39A-207ENST00000588542 IGKV2D-40P01614 121 aaPredicted RBP14.57□□□□□ -0.08
DDX39A-207ENST00000588542 GCHFRP30047 84 aa14.57□□□□□ -0.08
DDX39A-207ENST00000588542 CDKN1BP46527 198 aa14.57□□□□□ -0.08
DDX39A-207ENST00000588542 KIR3DS1Q14943 382 aa14.57□□□□□ -0.08
DDX39A-207ENST00000588542 AKR1C8PQ5T2L2 129 aa14.57□□□□□ -0.08
DDX39A-207ENST00000588542 ZFAND6Q6FIF0 208 aa14.57□□□□□ -0.08
DDX39A-207ENST00000588542 GOLT1BQ9Y3E0 138 aa14.57□□□□□ -0.08
DDX39A-207ENST00000588542 CTXND1A0A1B0GTU2 59 aa14.56□□□□□ -0.08
DDX39A-207ENST00000588542 INSP01308 110 aa14.56□□□□□ -0.08
DDX39A-207ENST00000588542 C9orf47Q6ZRZ4 202 aa14.56□□□□□ -0.08
DDX39A-207ENST00000588542 ODF3Q96PU9 254 aa14.56□□□□□ -0.08
DDX39A-207ENST00000588542 AGPAT4-IT1Q9H0P7 198 aa14.56□□□□□ -0.08
DDX39A-207ENST00000588542 SMIM9A6NGZ8 99 aa14.55□□□□□ -0.08
DDX39A-207ENST00000588542 PFDN1O60925 122 aa14.55□□□□□ -0.08
DDX39A-207ENST00000588542 CXorf1O96002 111 aa14.55□□□□□ -0.08
DDX39A-207ENST00000588542 SEC11BP0C7V7 166 aa14.55□□□□□ -0.08
DDX39A-207ENST00000588542 FAM19A4Q96LR4 140 aa14.55□□□□□ -0.08
DDX39A-207ENST00000588542 LINC00477Q96M19 166 aa14.55□□□□□ -0.08
DDX39A-207ENST00000588542 VGLL1Q99990 258 aa14.55□□□□□ -0.08
DDX39A-207ENST00000588542 OTORQ9NRC9 128 aa14.55□□□□□ -0.08
DDX39A-207ENST00000588542 PGPA6NDG6 321 aa14.54□□□□□ -0.08
DDX39A-207ENST00000588542 HYLS1Q96M11 299 aa14.54□□□□□ -0.08
DDX39A-207ENST00000588542 KMT2CQ8NEZ4 4911 aaKnown RBP14.53□□□□□ -0.08
DDX39A-207ENST00000588542 LYSTQ99698 3801 aa14.53□□□□□ -0.08
DDX39A-207ENST00000588542 PLECQ15149 4684 aaKnown RBP14.53□□□□□ -0.08
DDX39A-207ENST00000588542 DIRC3C9JPN6 131 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms