RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 KCNIP2Q9NS61 270 aa13.96□□□□□ -0.17
TPM4-208ENST00000588410 EPPK1P58107 5090 aaKnown RBP13.96□□□□□ -0.17
TPM4-208ENST00000588410 HTN3P15516 51 aa13.95□□□□□ -0.18
TPM4-208ENST00000588410 TSPOP30536 169 aa13.95□□□□□ -0.18
TPM4-208ENST00000588410 CDKN1BP46527 198 aa13.95□□□□□ -0.18
TPM4-208ENST00000588410 DAD1P61803 113 aa13.95□□□□□ -0.18
TPM4-208ENST00000588410 OXA1LQ15070 435 aa13.95□□□□□ -0.18
TPM4-208ENST00000588410 ZNF586Q9NXT0 402 aa13.95□□□□□ -0.18
TPM4-208ENST00000588410 PLA2G2EQ9NZK7 142 aa13.95□□□□□ -0.18
TPM4-208ENST00000588410 TMEM14CQ9P0S9 112 aa13.95□□□□□ -0.18
TPM4-208ENST00000588410 PRAC2D3DTV9 90 aa13.94□□□□□ -0.18
TPM4-208ENST00000588410 ZNF253O75346 499 aa13.94□□□□□ -0.18
TPM4-208ENST00000588410 TIMM9Q9Y5J7 89 aa13.94□□□□□ -0.18
TPM4-208ENST00000588410 C17orf112F2Z3M2 114 aa13.93□□□□□ -0.18
TPM4-208ENST00000588410 PRM2P04554 102 aa13.93□□□□□ -0.18
TPM4-208ENST00000588410 HIST1H1EP10412 219 aaKnown RBP13.93□□□□□ -0.18
TPM4-208ENST00000588410 HTN1P15515 57 aa13.93□□□□□ -0.18
TPM4-208ENST00000588410 TAS2R60P59551 318 aa13.93□□□□□ -0.18
TPM4-208ENST00000588410 GCSAMLQ5JQS6 135 aa13.93□□□□□ -0.18
TPM4-208ENST00000588410 WDR61Q9GZS3 305 aaKnown RBP13.93□□□□□ -0.18
TPM4-208ENST00000588410 TRBV19A0A075B6N1 114 aa13.92□□□□□ -0.18
TPM4-208ENST00000588410 LYRM9A8MSI8 78 aa13.92□□□□□ -0.18
TPM4-208ENST00000588410 MPC2O95563 127 aa13.92□□□□□ -0.18
TPM4-208ENST00000588410 FAM210BQ96KR6 192 aa13.92□□□□□ -0.18
TPM4-208ENST00000588410 ATP5SQ99766 215 aa13.92□□□□□ -0.18
TPM4-208ENST00000588410 P0DMU3 169 aa13.91□□□□□ -0.18
TPM4-208ENST00000588410 FAM231AP0DMU4 169 aa13.91□□□□□ -0.18
TPM4-208ENST00000588410 FAM231CP0DMU5 169 aa13.91□□□□□ -0.18
TPM4-208ENST00000588410 BLNKQ8WV28 456 aa13.91□□□□□ -0.18
TPM4-208ENST00000588410 MRPL53Q96EL3 112 aaKnown RBP13.91□□□□□ -0.18
TPM4-208ENST00000588410 BIRC6Q9NR09 4857 aa13.91□□□□□ -0.18
TPM4-208ENST00000588410 H7BYZ3 331 aa13.9□□□□□ -0.18
TPM4-208ENST00000588410 IFNA5P01569 189 aa13.9□□□□□ -0.18
TPM4-208ENST00000588410 PYYP10082 97 aa13.9□□□□□ -0.18
TPM4-208ENST00000588410 AZU1P20160 251 aa13.9□□□□□ -0.18
TPM4-208ENST00000588410 LEPP41159 167 aa13.9□□□□□ -0.18
TPM4-208ENST00000588410 PDE6HQ13956 83 aa13.9□□□□□ -0.18
TPM4-208ENST00000588410 C16orf74Q96GX8 76 aa13.9□□□□□ -0.18
TPM4-208ENST00000588410 C20orf144Q9BQM9 153 aa13.9□□□□□ -0.18
TPM4-208ENST00000588410 SLC25A2Q9BXI2 301 aa13.9□□□□□ -0.18
TPM4-208ENST00000588410 PARD6GQ9BYG4 376 aaPredicted RBP13.9□□□□□ -0.18
TPM4-208ENST00000588410 AAMDCQ9H7C9 122 aa13.9□□□□□ -0.18
TPM4-208ENST00000588410 PRELID1Q9Y255 219 aa13.9□□□□□ -0.18
TPM4-208ENST00000588410 HSPB11Q9Y547 144 aa13.9□□□□□ -0.18
TPM4-208ENST00000588410 NPIPB6E9PJ23 425 aa13.89□□□□□ -0.19
TPM4-208ENST00000588410 J3KRW8 73 aa13.89□□□□□ -0.19
TPM4-208ENST00000588410 DEFB130BP0DP73 79 aa13.89□□□□□ -0.19
TPM4-208ENST00000588410 DEFB130AP0DP74 79 aa13.89□□□□□ -0.19
TPM4-208ENST00000588410 RPL12P30050 165 aaKnown RBP13.89□□□□□ -0.19
TPM4-208ENST00000588410 MIR17HGQ75NE6 70 aa13.89□□□□□ -0.19
TPM4-208ENST00000588410 SCGB1C1Q8TD33 95 aa13.89□□□□□ -0.19
TPM4-208ENST00000588410 MRPL32Q9BYC8 188 aaKnown RBP13.89□□□□□ -0.19
TPM4-208ENST00000588410 MBD2Q9UBB5 411 aa13.89□□□□□ -0.19
TPM4-208ENST00000588410 CT45A10P0DMU9 189 aa13.88□□□□□ -0.19
TPM4-208ENST00000588410 ZNF493Q6ZR52 646 aa13.88□□□□□ -0.19
TPM4-208ENST00000588410 CCDC28AQ8IWP9 274 aa13.88□□□□□ -0.19
TPM4-208ENST00000588410 ODF3Q96PU9 254 aa13.88□□□□□ -0.19
TPM4-208ENST00000588410 SMIM3Q9BZL3 60 aa13.88□□□□□ -0.19
TPM4-208ENST00000588410 OR51M1Q9H341 326 aa13.88□□□□□ -0.19
TPM4-208ENST00000588410 M0R3E3 92 aa13.87□□□□□ -0.19
TPM4-208ENST00000588410 NDUFB4O95168 129 aa13.87□□□□□ -0.19
TPM4-208ENST00000588410 KIR3DS1Q14943 382 aa13.87□□□□□ -0.19
TPM4-208ENST00000588410 GFI1BQ5VTD9 330 aa13.87□□□□□ -0.19
TPM4-208ENST00000588410 POM121L12Q8N7R1 296 aa13.87□□□□□ -0.19
TPM4-208ENST00000588410 FUT9Q9Y231 359 aa13.87□□□□□ -0.19
TPM4-208ENST00000588410 TIMM8BQ9Y5J9 83 aaPredicted RBP13.87□□□□□ -0.19
TPM4-208ENST00000588410 ALG5Q9Y673 324 aa13.87□□□□□ -0.19
TPM4-208ENST00000588410 PTTG1O95997 202 aa13.86□□□□□ -0.19
TPM4-208ENST00000588410 NBEAP1P0C6P0 100 aa13.86□□□□□ -0.19
TPM4-208ENST00000588410 FCN2Q15485 313 aa13.86□□□□□ -0.19
TPM4-208ENST00000588410 UBE2DNLQ8IWF7 75 aa13.86□□□□□ -0.19
TPM4-208ENST00000588410 EXOC3-AS1Q8N2X6 119 aa13.86□□□□□ -0.19
TPM4-208ENST00000588410 TMEM263Q8WUH6 116 aaKnown RBP13.86□□□□□ -0.19
TPM4-208ENST00000588410 FAM167A-AS1Q96KT0 104 aa13.86□□□□□ -0.19
TPM4-208ENST00000588410 PAXXQ9BUH6 204 aa13.86□□□□□ -0.19
TPM4-208ENST00000588410 PLAC8L1A1L4L8 177 aa13.85□□□□□ -0.19
TPM4-208ENST00000588410 ERCC8Q13216 396 aa13.85□□□□□ -0.19
TPM4-208ENST00000588410 ICAM4Q14773 271 aa13.85□□□□□ -0.19
TPM4-208ENST00000588410 FFAR4Q5NUL3 377 aa13.85□□□□□ -0.19
TPM4-208ENST00000588410 TMEM88Q6PEY1 159 aa13.85□□□□□ -0.19
TPM4-208ENST00000588410 LINC00477Q96M19 166 aa13.85□□□□□ -0.19
TPM4-208ENST00000588410 TRAV12-3A0A0B4J271 114 aa13.84□□□□□ -0.19
TPM4-208ENST00000588410 OR7C2O60412 319 aa13.84□□□□□ -0.19
TPM4-208ENST00000588410 OR10J4P0C629 311 aa13.84□□□□□ -0.19
TPM4-208ENST00000588410 FAM122CQ6P4D5 195 aa13.84□□□□□ -0.19
TPM4-208ENST00000588410 RNASE8Q8TDE3 154 aaKnown RBP13.84□□□□□ -0.19
TPM4-208ENST00000588410 RNF141Q8WVD5 230 aa13.84□□□□□ -0.19
TPM4-208ENST00000588410 NOP10Q9NPE3 64 aaKnown RBP13.84□□□□□ -0.19
TPM4-208ENST00000588410 F5H768 121 aa13.83□□□□□ -0.2
TPM4-208ENST00000588410 SLC25A5P05141 298 aaKnown RBP13.83□□□□□ -0.2
TPM4-208ENST00000588410 ATP5G1P05496 136 aa13.83□□□□□ -0.2
TPM4-208ENST00000588410 ATP5G3P48201 142 aa13.83□□□□□ -0.2
TPM4-208ENST00000588410 MED28Q9H204 178 aa13.83□□□□□ -0.2
TPM4-208ENST00000588410 KMT2AQ03164 3969 aa13.82□□□□□ -0.2
TPM4-208ENST00000588410 CBY3A6NI87 242 aa13.82□□□□□ -0.2
TPM4-208ENST00000588410 TAS2R45P59539 299 aa13.82□□□□□ -0.2
TPM4-208ENST00000588410 TMEM78Q5T7P6 136 aa13.82□□□□□ -0.2
TPM4-208ENST00000588410 C15orf53Q8NAA6 179 aa13.82□□□□□ -0.2
TPM4-208ENST00000588410 FXYD5Q96DB9 178 aa13.82□□□□□ -0.2
TPM4-208ENST00000588410 AGPAT4-IT1Q9H0P7 198 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 440 ms