RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 RFNGQ9Y644 331 aa8.72□□□□□ -1.01
SDHDP1-201ENST00000588055 ARL14EPLP0DKL9 152 aa8.71□□□□□ -1.02
SDHDP1-201ENST00000588055 EIF5AL1Q6IS14 154 aaKnown RBP8.71□□□□□ -1.02
SDHDP1-201ENST00000588055 LYPD1Q8N2G4 141 aa8.71□□□□□ -1.02
SDHDP1-201ENST00000588055 RAB24Q969Q5 203 aa8.71□□□□□ -1.02
SDHDP1-201ENST00000588055 WWC2-AS2Q96NR7 200 aa8.71□□□□□ -1.02
SDHDP1-201ENST00000588055 OVOL2Q9BRP0 275 aa8.71□□□□□ -1.02
SDHDP1-201ENST00000588055 CYTL1Q9NRR1 136 aa8.71□□□□□ -1.02
SDHDP1-201ENST00000588055 CTXND1A0A1B0GTU2 59 aa8.7□□□□□ -1.02
SDHDP1-201ENST00000588055 UMAD1C9J7I0 102 aa8.7□□□□□ -1.02
SDHDP1-201ENST00000588055 BOLA2-SMG1P6H3BVE0 249 aa8.7□□□□□ -1.02
SDHDP1-201ENST00000588055 HMGB3O15347 200 aaKnown RBP8.7□□□□□ -1.02
SDHDP1-201ENST00000588055 CXorf1O96002 111 aa8.7□□□□□ -1.02
SDHDP1-201ENST00000588055 STAG3L2P0CL84 134 aa8.7□□□□□ -1.02
SDHDP1-201ENST00000588055 STAG3L3P0CL85 134 aa8.7□□□□□ -1.02
SDHDP1-201ENST00000588055 ICAM4Q14773 271 aa8.7□□□□□ -1.02
SDHDP1-201ENST00000588055 RPP25LQ8N5L8 163 aaKnown RBP8.7□□□□□ -1.02
SDHDP1-201ENST00000588055 PHYHIPLQ96FC7 376 aa8.7□□□□□ -1.02
SDHDP1-201ENST00000588055 RARRES2Q99969 163 aa8.7□□□□□ -1.02
SDHDP1-201ENST00000588055 TMEM167BQ9NRX6 74 aa8.7□□□□□ -1.02
SDHDP1-201ENST00000588055 XCL2Q9UBD3 114 aa8.7□□□□□ -1.02
SDHDP1-201ENST00000588055 A0A1B0GVG6 124 aa8.69□□□□□ -1.02
SDHDP1-201ENST00000588055 ZNF705FA8MVS1 300 aaPredicted RBP8.69□□□□□ -1.02
SDHDP1-201ENST00000588055 NDUFB4O95168 129 aa8.69□□□□□ -1.02
SDHDP1-201ENST00000588055 INSP01308 110 aa8.69□□□□□ -1.02
SDHDP1-201ENST00000588055 SEC11BP0C7V7 166 aa8.69□□□□□ -1.02
SDHDP1-201ENST00000588055 ZNF705DP0CH99 300 aaPredicted RBP8.69□□□□□ -1.02
SDHDP1-201ENST00000588055 ZNF705BP0CI00 300 aaPredicted RBP8.69□□□□□ -1.02
SDHDP1-201ENST00000588055 TSPOP30536 169 aa8.69□□□□□ -1.02
SDHDP1-201ENST00000588055 RANP62826 216 aaKnown RBP8.69□□□□□ -1.02
SDHDP1-201ENST00000588055 BAP18Q8IXM2 172 aa8.69□□□□□ -1.02
SDHDP1-201ENST00000588055 EXOC3-AS1Q8N2X6 119 aa8.69□□□□□ -1.02
SDHDP1-201ENST00000588055 OR11H2Q8NH07 326 aa8.69□□□□□ -1.02
SDHDP1-201ENST00000588055 STOML3Q8TAV4 291 aa8.69□□□□□ -1.02
SDHDP1-201ENST00000588055 CMTM2Q8TAZ6 248 aa8.69□□□□□ -1.02
SDHDP1-201ENST00000588055 TMEM208Q9BTX3 173 aa8.69□□□□□ -1.02
SDHDP1-201ENST00000588055 SLC35B3Q9H1N7 401 aa8.69□□□□□ -1.02
SDHDP1-201ENST00000588055 Q9H3A6 140 aa8.69□□□□□ -1.02
SDHDP1-201ENST00000588055 GOLT1BQ9Y3E0 138 aa8.69□□□□□ -1.02
SDHDP1-201ENST00000588055 AGRNO00468 2067 aa8.69□□□□□ -1.02
SDHDP1-201ENST00000588055 M0R3E3 92 aa8.68□□□□□ -1.02
SDHDP1-201ENST00000588055 EIF3GO75821 320 aaKnown RBP eCLIP8.68□□□□□ -1.02
SDHDP1-201ENST00000588055 GCHFRP30047 84 aa8.68□□□□□ -1.02
SDHDP1-201ENST00000588055 FXYD7P58549 80 aa8.68□□□□□ -1.02
SDHDP1-201ENST00000588055 SPINK13Q1W4C9 94 aa8.68□□□□□ -1.02
SDHDP1-201ENST00000588055 TMEM78Q5T7P6 136 aa8.68□□□□□ -1.02
SDHDP1-201ENST00000588055 RXFP4Q8TDU9 374 aa8.68□□□□□ -1.02
SDHDP1-201ENST00000588055 ZNF503Q96F45 646 aa8.68□□□□□ -1.02
SDHDP1-201ENST00000588055 OTORQ9NRC9 128 aa8.68□□□□□ -1.02
SDHDP1-201ENST00000588055 HUWE1Q7Z6Z7 4374 aaKnown RBP8.68□□□□□ -1.02
SDHDP1-201ENST00000588055 IGHV3OR16-12A0A075B7B8 117 aa8.67□□□□□ -1.02
SDHDP1-201ENST00000588055 MAP1LC3B2A6NCE7 125 aa8.67□□□□□ -1.02
SDHDP1-201ENST00000588055 A8MTW9 85 aa8.67□□□□□ -1.02
SDHDP1-201ENST00000588055 M0R2Z0 102 aa8.67□□□□□ -1.02
SDHDP1-201ENST00000588055 LEPP41159 167 aa8.67□□□□□ -1.02
SDHDP1-201ENST00000588055 DPPA3Q6W0C5 159 aa8.67□□□□□ -1.02
SDHDP1-201ENST00000588055 SLC51BQ86UW2 128 aa8.67□□□□□ -1.02
SDHDP1-201ENST00000588055 FAM213BQ8TBF2 198 aa8.67□□□□□ -1.02
SDHDP1-201ENST00000588055 TMED6Q8WW62 240 aa8.67□□□□□ -1.02
SDHDP1-201ENST00000588055 MAP1LC3BQ9GZQ8 125 aa8.67□□□□□ -1.02
SDHDP1-201ENST00000588055 NBEAL2Q6ZNJ1 2754 aa8.66□□□□□ -1.02
SDHDP1-201ENST00000588055 NPIPB6E9PJ23 425 aa8.66□□□□□ -1.02
SDHDP1-201ENST00000588055 GIG44P09565 113 aaPredicted RBP8.66□□□□□ -1.02
SDHDP1-201ENST00000588055 MIFP14174 115 aa8.66□□□□□ -1.02
SDHDP1-201ENST00000588055 CDKN1BP46527 198 aa8.66□□□□□ -1.02
SDHDP1-201ENST00000588055 LGALSLQ3ZCW2 172 aaPredicted RBP8.66□□□□□ -1.02
SDHDP1-201ENST00000588055 AMTNQ6UX39 209 aa8.66□□□□□ -1.02
SDHDP1-201ENST00000588055 IL17DQ8TAD2 202 aa8.66□□□□□ -1.02
SDHDP1-201ENST00000588055 IGF2BP2-AS1Q96M15 143 aa8.66□□□□□ -1.02
SDHDP1-201ENST00000588055 ODF3Q96PU9 254 aa8.66□□□□□ -1.02
SDHDP1-201ENST00000588055 RPH3ALQ9UNE2 315 aa8.66□□□□□ -1.02
SDHDP1-201ENST00000588055 IGKV2-40A0A087WW87 121 aaPredicted RBP8.65□□□□□ -1.02
SDHDP1-201ENST00000588055 A0A0J9YWU9 116 aa8.65□□□□□ -1.02
SDHDP1-201ENST00000588055 PGPA6NDG6 321 aa8.65□□□□□ -1.02
SDHDP1-201ENST00000588055 PRAC2D3DTV9 90 aa8.65□□□□□ -1.02
SDHDP1-201ENST00000588055 TEX46H3BTG2 121 aa8.65□□□□□ -1.02
SDHDP1-201ENST00000588055 K7EQM0 130 aa8.65□□□□□ -1.02
SDHDP1-201ENST00000588055 IGKV2D-40P01614 121 aaPredicted RBP8.65□□□□□ -1.02
SDHDP1-201ENST00000588055 SLC25A5P05141 298 aaKnown RBP8.65□□□□□ -1.02
SDHDP1-201ENST00000588055 PRB4P10163 310 aaPredicted RBP8.65□□□□□ -1.02
SDHDP1-201ENST00000588055 RAB5CP51148 216 aa8.65□□□□□ -1.02
SDHDP1-201ENST00000588055 TMEM256Q8N2U0 113 aa8.65□□□□□ -1.02
SDHDP1-201ENST00000588055 C9orf62Q8N4C0 152 aa8.65□□□□□ -1.02
SDHDP1-201ENST00000588055 LINC00477Q96M19 166 aa8.65□□□□□ -1.02
SDHDP1-201ENST00000588055 C11orf68Q9H3H3 251 aaKnown RBP8.65□□□□□ -1.02
SDHDP1-201ENST00000588055 STAB2Q8WWQ8 2551 aa8.64□□□□□ -1.03
SDHDP1-201ENST00000588055 SERTM2A0A1B0GWG4 89 aa8.64□□□□□ -1.03
SDHDP1-201ENST00000588055 RBAKDNA6NC62 111 aa8.64□□□□□ -1.03
SDHDP1-201ENST00000588055 ZNF705EA8MWA4 302 aaPredicted RBP8.64□□□□□ -1.03
SDHDP1-201ENST00000588055 HBE1P02100 147 aa8.64□□□□□ -1.03
SDHDP1-201ENST00000588055 FGF8P55075 233 aaPredicted RBP8.64□□□□□ -1.03
SDHDP1-201ENST00000588055 CD300CQ08708 224 aa8.64□□□□□ -1.03
SDHDP1-201ENST00000588055 ZNF726P1Q15940 193 aa8.64□□□□□ -1.03
SDHDP1-201ENST00000588055 SSX7Q7RTT5 188 aa8.64□□□□□ -1.03
SDHDP1-201ENST00000588055 ARL6IP6Q8N6S5 226 aa8.64□□□□□ -1.03
SDHDP1-201ENST00000588055 C5orf17Q8NAS9 161 aa8.64□□□□□ -1.03
SDHDP1-201ENST00000588055 CSNK1G2-AS1Q8NCQ2 148 aa8.64□□□□□ -1.03
SDHDP1-201ENST00000588055 NKX6-2Q9C056 277 aaPredicted RBP8.64□□□□□ -1.03
SDHDP1-201ENST00000588055 EDA2RQ9HAV5 297 aa8.64□□□□□ -1.03
SDHDP1-201ENST00000588055 TENM3Q9P273 2699 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms