RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 PSG3Q16557 428 aa11.41□□□□□ -0.58
NCLN-203ENST00000587740 KHDC3LQ587J8 217 aa11.41□□□□□ -0.58
NCLN-203ENST00000587740 GDF5OSQ5U4N7 250 aa11.41□□□□□ -0.58
NCLN-203ENST00000587740 FAM122CQ6P4D5 195 aa11.41□□□□□ -0.58
NCLN-203ENST00000587740 TRPT1Q86TN4 253 aaKnown RBP11.41□□□□□ -0.58
NCLN-203ENST00000587740 ZNF738Q8NE65 137 aa11.41□□□□□ -0.58
NCLN-203ENST00000587740 SAT2Q96F10 170 aaPredicted RBP11.41□□□□□ -0.58
NCLN-203ENST00000587740 CLEC5AQ9NY25 188 aa11.41□□□□□ -0.58
NCLN-203ENST00000587740 HLA-DRB4X5D2U9 266 aa11.41□□□□□ -0.58
NCLN-203ENST00000587740 DNAH17Q9UFH2 4485 aa11.41□□□□□ -0.58
NCLN-203ENST00000587740 TRBV19A0A075B6N1 114 aa11.4□□□□□ -0.58
NCLN-203ENST00000587740 H3BMM0 161 aa11.4□□□□□ -0.58
NCLN-203ENST00000587740 SLC17A3O00476 420 aa11.4□□□□□ -0.58
NCLN-203ENST00000587740 BCL2L11O43521 198 aa11.4□□□□□ -0.58
NCLN-203ENST00000587740 ZNF253O75346 499 aa11.4□□□□□ -0.58
NCLN-203ENST00000587740 SPP1P10451 314 aa11.4□□□□□ -0.58
NCLN-203ENST00000587740 HLA-DMBP28068 263 aa11.4□□□□□ -0.58
NCLN-203ENST00000587740 DEFB1P60022 68 aa11.4□□□□□ -0.58
NCLN-203ENST00000587740 MORN3Q6PF18 240 aaPredicted RBP11.4□□□□□ -0.58
NCLN-203ENST00000587740 TMUB2Q71RG4 321 aa11.4□□□□□ -0.58
NCLN-203ENST00000587740 BLNKQ8WV28 456 aa11.4□□□□□ -0.58
NCLN-203ENST00000587740 RNF141Q8WVD5 230 aa11.4□□□□□ -0.58
NCLN-203ENST00000587740 HYLS1Q96M11 299 aa11.4□□□□□ -0.58
NCLN-203ENST00000587740 ZNF471Q9BX82 626 aaPredicted RBP11.4□□□□□ -0.58
NCLN-203ENST00000587740 A0A0J9YX75 114 aa11.39□□□□□ -0.59
NCLN-203ENST00000587740 F6UB75 175 aa11.39□□□□□ -0.59
NCLN-203ENST00000587740 NBEAP1P0C6P0 100 aa11.39□□□□□ -0.59
NCLN-203ENST00000587740 CDC34P49427 236 aaPredicted RBP11.39□□□□□ -0.59
NCLN-203ENST00000587740 NANOS2P60321 138 aaKnown RBP11.39□□□□□ -0.59
NCLN-203ENST00000587740 PSG9Q00887 426 aa11.39□□□□□ -0.59
NCLN-203ENST00000587740 PDE6HQ13956 83 aa11.39□□□□□ -0.59
NCLN-203ENST00000587740 TMEM41BQ5BJD5 291 aa11.39□□□□□ -0.59
NCLN-203ENST00000587740 OR4B1Q8NGF8 309 aa11.39□□□□□ -0.59
NCLN-203ENST00000587740 CA1P00915 261 aaPredicted RBP11.38□□□□□ -0.59
NCLN-203ENST00000587740 IGKV3-20P01619 116 aa11.38□□□□□ -0.59
NCLN-203ENST00000587740 OR10J4P0C629 311 aa11.38□□□□□ -0.59
NCLN-203ENST00000587740 NUTF2P61970 127 aaKnown RBP11.38□□□□□ -0.59
NCLN-203ENST00000587740 EIF5AP63241 154 aaKnown RBP11.38□□□□□ -0.59
NCLN-203ENST00000587740 AKR1C8PQ5T2L2 129 aa11.38□□□□□ -0.59
NCLN-203ENST00000587740 FXYD5Q96DB9 178 aa11.38□□□□□ -0.59
NCLN-203ENST00000587740 ABCA13Q86UQ4 5058 aa11.37□□□□□ -0.59
NCLN-203ENST00000587740 EIF3GO75821 320 aaKnown RBP eCLIP11.37□□□□□ -0.59
NCLN-203ENST00000587740 DUSP14O95147 198 aaKnown RBP11.37□□□□□ -0.59
NCLN-203ENST00000587740 UBE2L3P68036 154 aaKnown RBP11.37□□□□□ -0.59
NCLN-203ENST00000587740 LGALSLQ3ZCW2 172 aaPredicted RBP11.37□□□□□ -0.59
NCLN-203ENST00000587740 PQLC2Q6ZP29 291 aa11.37□□□□□ -0.59
NCLN-203ENST00000587740 RPUSD4Q96CM3 377 aaKnown RBP11.37□□□□□ -0.59
NCLN-203ENST00000587740 ZNF503Q96F45 646 aa11.37□□□□□ -0.59
NCLN-203ENST00000587740 ACTR3CQ9C0K3 210 aaPredicted RBP11.37□□□□□ -0.59
NCLN-203ENST00000587740 AAMDCQ9H7C9 122 aa11.37□□□□□ -0.59
NCLN-203ENST00000587740 DYNC1H1Q14204 4646 aaKnown RBP11.37□□□□□ -0.59
NCLN-203ENST00000587740 A0A1B0GVY2 172 aa11.36□□□□□ -0.59
NCLN-203ENST00000587740 ZNF705FA8MVS1 300 aaPredicted RBP11.36□□□□□ -0.59
NCLN-203ENST00000587740 HMGB3O15347 200 aaKnown RBP11.36□□□□□ -0.59
NCLN-203ENST00000587740 NDUFB4O95168 129 aa11.36□□□□□ -0.59
NCLN-203ENST00000587740 CD300CQ08708 224 aa11.36□□□□□ -0.59
NCLN-203ENST00000587740 ZFP69Q49AA0 526 aa11.36□□□□□ -0.59
NCLN-203ENST00000587740 RAB24Q969Q5 203 aa11.36□□□□□ -0.59
NCLN-203ENST00000587740 CLUHP3Q96NS8 147 aa11.36□□□□□ -0.59
NCLN-203ENST00000587740 PRELID1Q9Y255 219 aa11.36□□□□□ -0.59
NCLN-203ENST00000587740 SEC11BP0C7V7 166 aa11.35□□□□□ -0.59
NCLN-203ENST00000587740 ZNF705DP0CH99 300 aaPredicted RBP11.35□□□□□ -0.59
NCLN-203ENST00000587740 ZNF705BP0CI00 300 aaPredicted RBP11.35□□□□□ -0.59
NCLN-203ENST00000587740 STAG3L2P0CL84 134 aa11.35□□□□□ -0.59
NCLN-203ENST00000587740 STAG3L3P0CL85 134 aa11.35□□□□□ -0.59
NCLN-203ENST00000587740 CNN1P51911 297 aaKnown RBP11.35□□□□□ -0.59
NCLN-203ENST00000587740 HIST1H1AQ02539 215 aaPredicted RBP11.35□□□□□ -0.59
NCLN-203ENST00000587740 BAP18Q8IXM2 172 aa11.35□□□□□ -0.59
NCLN-203ENST00000587740 OR8A1Q8NGG7 326 aa11.35□□□□□ -0.59
NCLN-203ENST00000587740 C11orf45Q8TAV5 145 aa11.35□□□□□ -0.59
NCLN-203ENST00000587740 MRPL53Q96EL3 112 aaKnown RBP11.35□□□□□ -0.59
NCLN-203ENST00000587740 C1QTNF4Q9BXJ3 329 aa11.35□□□□□ -0.59
NCLN-203ENST00000587740 APLNQ9ULZ1 77 aa11.35□□□□□ -0.59
NCLN-203ENST00000587740 ARL14EPLP0DKL9 152 aa11.34□□□□□ -0.59
NCLN-203ENST00000587740 TPT1P13693 172 aaKnown RBP11.34□□□□□ -0.59
NCLN-203ENST00000587740 C4BPBP20851 252 aa11.34□□□□□ -0.59
NCLN-203ENST00000587740 LYPD1Q8N2G4 141 aa11.34□□□□□ -0.59
NCLN-203ENST00000587740 EXOC3-AS1Q8N2X6 119 aa11.34□□□□□ -0.59
NCLN-203ENST00000587740 OR10J6PQ8NGY7 276 aa11.34□□□□□ -0.59
NCLN-203ENST00000587740 PHYHIPLQ96FC7 376 aa11.34□□□□□ -0.59
NCLN-203ENST00000587740 RARRES2Q99969 163 aa11.34□□□□□ -0.59
NCLN-203ENST00000587740 DNAH11Q96DT5 4516 aa11.34□□□□□ -0.59
NCLN-203ENST00000587740 CTXND1A0A1B0GTU2 59 aa11.33□□□□□ -0.6
NCLN-203ENST00000587740 A8MTW9 85 aa11.33□□□□□ -0.6
NCLN-203ENST00000587740 CXorf1O96002 111 aa11.33□□□□□ -0.6
NCLN-203ENST00000587740 GIG44P09565 113 aaPredicted RBP11.33□□□□□ -0.6
NCLN-203ENST00000587740 MED14OSP0DP75 135 aa11.33□□□□□ -0.6
NCLN-203ENST00000587740 PRB4P10163 310 aaPredicted RBP11.33□□□□□ -0.6
NCLN-203ENST00000587740 FXYD7P58549 80 aa11.33□□□□□ -0.6
NCLN-203ENST00000587740 RANP62826 216 aaKnown RBP11.33□□□□□ -0.6
NCLN-203ENST00000587740 ICAM4Q14773 271 aa11.33□□□□□ -0.6
NCLN-203ENST00000587740 C2CD4CQ8TF44 421 aa11.33□□□□□ -0.6
NCLN-203ENST00000587740 C11orf68Q9H3H3 251 aaKnown RBP11.33□□□□□ -0.6
NCLN-203ENST00000587740 PPP1R14DQ9NXH3 145 aa11.33□□□□□ -0.6
NCLN-203ENST00000587740 XCL2Q9UBD3 114 aa11.33□□□□□ -0.6
NCLN-203ENST00000587740 PRAC2D3DTV9 90 aa11.32□□□□□ -0.6
NCLN-203ENST00000587740 M0R3E3 92 aa11.32□□□□□ -0.6
NCLN-203ENST00000587740 DEFB4AO15263 64 aa11.32□□□□□ -0.6
NCLN-203ENST00000587740 STOML3Q8TAV4 291 aa11.32□□□□□ -0.6
NCLN-203ENST00000587740 KRTAP4-5Q9BYR2 181 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms