RNA–Protein interactions for RNA: ENST00000587560.5

H3F3B-206, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-206ENST00000587560 DEFB131AP59861 70 aa13.54□□□□□ -0.24
H3F3B-206ENST00000587560 CD81P60033 236 aa13.54□□□□□ -0.24
H3F3B-206ENST00000587560 ICAM4Q14773 271 aa13.54□□□□□ -0.24
H3F3B-206ENST00000587560 PSMG4Q5JS54 123 aa13.54□□□□□ -0.24
H3F3B-206ENST00000587560 PRR25Q96S07 402 aa13.54□□□□□ -0.24
H3F3B-206ENST00000587560 MANBALQ9NQG1 85 aa13.54□□□□□ -0.24
H3F3B-206ENST00000587560 PGPA6NDG6 321 aa13.53□□□□□ -0.24
H3F3B-206ENST00000587560 A8MTW9 85 aa13.53□□□□□ -0.24
H3F3B-206ENST00000587560 PAGE4O60829 102 aa13.53□□□□□ -0.24
H3F3B-206ENST00000587560 IQCF2Q8IXL9 164 aa13.53□□□□□ -0.24
H3F3B-206ENST00000587560 CITED4Q96RK1 184 aa13.53□□□□□ -0.24
H3F3B-206ENST00000587560 NKX6-2Q9C056 277 aaPredicted RBP13.53□□□□□ -0.24
H3F3B-206ENST00000587560 ZNF705FA8MVS1 300 aaPredicted RBP13.52□□□□□ -0.25
H3F3B-206ENST00000587560 OR11H12B2RN74 326 aa13.52□□□□□ -0.25
H3F3B-206ENST00000587560 PRAC2D3DTV9 90 aa13.52□□□□□ -0.25
H3F3B-206ENST00000587560 DEFB1P60022 68 aa13.52□□□□□ -0.25
H3F3B-206ENST00000587560 UBE2G2P60604 165 aa13.52□□□□□ -0.25
H3F3B-206ENST00000587560 SUMO1P63165 101 aaKnown RBP13.52□□□□□ -0.25
H3F3B-206ENST00000587560 LINC00052Q96N35 136 aa13.52□□□□□ -0.25
H3F3B-206ENST00000587560 WFDC10AQ9H1F0 79 aa13.52□□□□□ -0.25
H3F3B-206ENST00000587560 AAMDCQ9H7C9 122 aa13.52□□□□□ -0.25
H3F3B-206ENST00000587560 LOC102723971A0A1B0GUV8 181 aa13.51□□□□□ -0.25
H3F3B-206ENST00000587560 BCL2P10415 239 aa13.51□□□□□ -0.25
H3F3B-206ENST00000587560 ATP5G3P48201 142 aa13.51□□□□□ -0.25
H3F3B-206ENST00000587560 ZNF124Q15973 351 aa13.51□□□□□ -0.25
H3F3B-206ENST00000587560 GDF5OSQ5U4N7 250 aa13.51□□□□□ -0.25
H3F3B-206ENST00000587560 GTSCR1Q86UQ5 136 aa13.51□□□□□ -0.25
H3F3B-206ENST00000587560 APRG1Q8IVJ8 170 aa13.51□□□□□ -0.25
H3F3B-206ENST00000587560 C5orf17Q8NAS9 161 aa13.51□□□□□ -0.25
H3F3B-206ENST00000587560 RPUSD4Q96CM3 377 aaKnown RBP13.51□□□□□ -0.25
H3F3B-206ENST00000587560 SAV1Q9H4B6 383 aaPredicted RBP13.51□□□□□ -0.25
H3F3B-206ENST00000587560 GNG13Q9P2W3 67 aa13.51□□□□□ -0.25
H3F3B-206ENST00000587560 A0A0J9YX75 114 aa13.5□□□□□ -0.25
H3F3B-206ENST00000587560 DIRC3C9JPN6 131 aa13.5□□□□□ -0.25
H3F3B-206ENST00000587560 FOXI2Q6ZQN5 318 aa13.5□□□□□ -0.25
H3F3B-206ENST00000587560 ZNF738Q8NE65 137 aa13.5□□□□□ -0.25
H3F3B-206ENST00000587560 CLUHP3Q96NS8 147 aa13.5□□□□□ -0.25
H3F3B-206ENST00000587560 TXNDC17Q9BRA2 123 aa13.5□□□□□ -0.25
H3F3B-206ENST00000587560 TCEAL7Q9BRU2 100 aa13.5□□□□□ -0.25
H3F3B-206ENST00000587560 A8MZ25 164 aa13.49□□□□□ -0.25
H3F3B-206ENST00000587560 F6UB75 175 aa13.49□□□□□ -0.25
H3F3B-206ENST00000587560 NDUFS6O75380 124 aaKnown RBP13.49□□□□□ -0.25
H3F3B-206ENST00000587560 HLA-DRB4P13762 266 aa13.49□□□□□ -0.25
H3F3B-206ENST00000587560 TAGLN2P37802 199 aaKnown RBP13.49□□□□□ -0.25
H3F3B-206ENST00000587560 ZNF506Q5JVG8 444 aa13.49□□□□□ -0.25
H3F3B-206ENST00000587560 OR8A1Q8NGG7 326 aa13.49□□□□□ -0.25
H3F3B-206ENST00000587560 RXFP4Q8TDU9 374 aa13.49□□□□□ -0.25
H3F3B-206ENST00000587560 FAM210AQ96ND0 272 aa13.49□□□□□ -0.25
H3F3B-206ENST00000587560 AURKAIP1Q9NWT8 199 aaPredicted RBP13.49□□□□□ -0.25
H3F3B-206ENST00000587560 EPDR1Q9UM22 224 aa13.49□□□□□ -0.25
H3F3B-206ENST00000587560 HLA-DRB4X5D2U9 266 aa13.49□□□□□ -0.25
H3F3B-206ENST00000587560 RBAKDNA6NC62 111 aa13.48□□□□□ -0.25
H3F3B-206ENST00000587560 H3BMM0 161 aa13.48□□□□□ -0.25
H3F3B-206ENST00000587560 TCRAP04437 139 aa13.48□□□□□ -0.25
H3F3B-206ENST00000587560 RAB14P61106 215 aa13.48□□□□□ -0.25
H3F3B-206ENST00000587560 DEFB125Q8N687 156 aa13.48□□□□□ -0.25
H3F3B-206ENST00000587560 RARRES2Q99969 163 aa13.48□□□□□ -0.25
H3F3B-206ENST00000587560 VAX2Q9UIW0 290 aa13.48□□□□□ -0.25
H3F3B-206ENST00000587560 RBFOX3A6NFN3 312 aa13.47□□□□□ -0.25
H3F3B-206ENST00000587560 KNCNA6PVL3 124 aa13.47□□□□□ -0.25
H3F3B-206ENST00000587560 NPIPB6E9PJ23 425 aa13.47□□□□□ -0.25
H3F3B-206ENST00000587560 IFNA1P01562 189 aa13.47□□□□□ -0.25
H3F3B-206ENST00000587560 SLC25A5P05141 298 aaKnown RBP13.47□□□□□ -0.25
H3F3B-206ENST00000587560 PRB4P10163 310 aaPredicted RBP13.47□□□□□ -0.25
H3F3B-206ENST00000587560 GNG5P63218 68 aa13.47□□□□□ -0.25
H3F3B-206ENST00000587560 MEF2BQ02080 365 aaPredicted RBP13.47□□□□□ -0.25
H3F3B-206ENST00000587560 HAGHQ16775 308 aa13.47□□□□□ -0.25
H3F3B-206ENST00000587560 CST9LP1Q5W188 147 aa13.47□□□□□ -0.25
H3F3B-206ENST00000587560 LINC00322Q6ZN03 302 aaPredicted RBP13.47□□□□□ -0.25
H3F3B-206ENST00000587560 C9orf47Q6ZRZ4 202 aa13.47□□□□□ -0.25
H3F3B-206ENST00000587560 C11orf52Q96A22 123 aa13.47□□□□□ -0.25
H3F3B-206ENST00000587560 MED9Q9NWA0 146 aa13.47□□□□□ -0.25
H3F3B-206ENST00000587560 RBMY1BA6NDE4 496 aaKnown RBP13.46□□□□□ -0.25
H3F3B-206ENST00000587560 RBMY1EA6NEQ0 496 aaKnown RBP13.46□□□□□ -0.25
H3F3B-206ENST00000587560 C11orf94C9JXX5 98 aa13.46□□□□□ -0.25
H3F3B-206ENST00000587560 K7EIL1 84 aa13.46□□□□□ -0.25
H3F3B-206ENST00000587560 IGLV2-11P01706 119 aa13.46□□□□□ -0.25
H3F3B-206ENST00000587560 RBMY1DP0C7P1 496 aaKnown RBP13.46□□□□□ -0.25
H3F3B-206ENST00000587560 AMTNQ6UX39 209 aa13.46□□□□□ -0.25
H3F3B-206ENST00000587560 TRPT1Q86TN4 253 aaKnown RBP13.46□□□□□ -0.25
H3F3B-206ENST00000587560 C2CD4CQ8TF44 421 aa13.46□□□□□ -0.25
H3F3B-206ENST00000587560 HIST1H2BAQ96A08 127 aa13.46□□□□□ -0.25
H3F3B-206ENST00000587560 ATG101Q9BSB4 218 aa13.46□□□□□ -0.25
H3F3B-206ENST00000587560 PPP1R14DQ9NXH3 145 aa13.46□□□□□ -0.25
H3F3B-206ENST00000587560 IGKV2-40A0A087WW87 121 aaPredicted RBP13.45□□□□□ -0.26
H3F3B-206ENST00000587560 SERTM2A0A1B0GWG4 89 aa13.45□□□□□ -0.26
H3F3B-206ENST00000587560 PEX7O00628 323 aa13.45□□□□□ -0.26
H3F3B-206ENST00000587560 IGKV2D-40P01614 121 aaPredicted RBP13.45□□□□□ -0.26
H3F3B-206ENST00000587560 ZNF705DP0CH99 300 aaPredicted RBP13.45□□□□□ -0.26
H3F3B-206ENST00000587560 ZNF705BP0CI00 300 aaPredicted RBP13.45□□□□□ -0.26
H3F3B-206ENST00000587560 CSN1S1P47710 185 aa13.45□□□□□ -0.26
H3F3B-206ENST00000587560 ACTL10Q5JWF8 245 aa13.45□□□□□ -0.26
H3F3B-206ENST00000587560 CMTM2Q8TAZ6 248 aa13.45□□□□□ -0.26
H3F3B-206ENST00000587560 FAM19A4Q96LR4 140 aa13.45□□□□□ -0.26
H3F3B-206ENST00000587560 AGPAT4-IT1Q9H0P7 198 aa13.45□□□□□ -0.26
H3F3B-206ENST00000587560 KLF12Q9Y4X4 402 aa13.45□□□□□ -0.26
H3F3B-206ENST00000587560 CNN1P51911 297 aaKnown RBP13.44□□□□□ -0.26
H3F3B-206ENST00000587560 TOR2AQ5JU69 321 aa13.44□□□□□ -0.26
H3F3B-206ENST00000587560 EBLN2Q6P2I7 272 aa13.44□□□□□ -0.26
H3F3B-206ENST00000587560 GOLT1AQ6ZVE7 132 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms