RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 TET2Q6N021 2002 aaPredicted RBP10.98□□□□□ -0.65
CACNA1A-209ENST00000587525 D6R8Y8 96 aa10.98□□□□□ -0.65
CACNA1A-209ENST00000587525 ANKRD39Q53RE8 183 aa10.98□□□□□ -0.65
CACNA1A-209ENST00000587525 RUSC1-AS1Q66K80 236 aa10.98□□□□□ -0.65
CACNA1A-209ENST00000587525 FAM169BQ8N8A8 192 aa10.98□□□□□ -0.65
CACNA1A-209ENST00000587525 DDB2Q92466 427 aa10.98□□□□□ -0.65
CACNA1A-209ENST00000587525 TTTY13Q9BZ97 58 aa10.98□□□□□ -0.65
CACNA1A-209ENST00000587525 TRAV30A0A087WSZ9 112 aa10.98□□□□□ -0.65
CACNA1A-209ENST00000587525 TRAV9-1A0A075B6T8 112 aa10.98□□□□□ -0.65
CACNA1A-209ENST00000587525 NBR2O15453 112 aa10.98□□□□□ -0.65
CACNA1A-209ENST00000587525 LYZL1Q6UWQ5 148 aa10.98□□□□□ -0.65
CACNA1A-209ENST00000587525 OR5AN1Q8NGI8 311 aa10.98□□□□□ -0.65
CACNA1A-209ENST00000587525 C16orf92Q96LL3 132 aa10.98□□□□□ -0.65
CACNA1A-209ENST00000587525 BUB1B-PAK6H3BSN5 160 aa10.97□□□□□ -0.65
CACNA1A-209ENST00000587525 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.97□□□□□ -0.65
CACNA1A-209ENST00000587525 Q71RC1 249 aaPredicted RBP10.97□□□□□ -0.65
CACNA1A-209ENST00000587525 FXYD5Q96DB9 178 aa10.97□□□□□ -0.65
CACNA1A-209ENST00000587525 LRBAP50851 2863 aa10.97□□□□□ -0.65
CACNA1A-209ENST00000587525 FAM90A9PA6NNJ1 464 aa10.97□□□□□ -0.65
CACNA1A-209ENST00000587525 C8orf46Q8TAG6 207 aa10.97□□□□□ -0.65
CACNA1A-209ENST00000587525 ARPC1AQ92747 370 aa10.97□□□□□ -0.65
CACNA1A-209ENST00000587525 MRPS16Q9Y3D3 137 aaKnown RBP10.97□□□□□ -0.65
CACNA1A-209ENST00000587525 IGHV1-24A0A0C4DH33 117 aa10.97□□□□□ -0.65
CACNA1A-209ENST00000587525 IFI27P40305 119 aaPredicted RBP10.97□□□□□ -0.65
CACNA1A-209ENST00000587525 G3V318 75 aa10.96□□□□□ -0.65
CACNA1A-209ENST00000587525 THBDP07204 575 aa10.96□□□□□ -0.65
CACNA1A-209ENST00000587525 SCGB1C2P0DMR2 95 aa10.96□□□□□ -0.65
CACNA1A-209ENST00000587525 FAM71F2Q6NXP2 309 aa10.96□□□□□ -0.65
CACNA1A-209ENST00000587525 LINC00322Q6ZN03 302 aaPredicted RBP10.96□□□□□ -0.65
CACNA1A-209ENST00000587525 J3QR89 54 aa10.96□□□□□ -0.65
CACNA1A-209ENST00000587525 LHBP01229 141 aa10.96□□□□□ -0.65
CACNA1A-209ENST00000587525 SCGB1D4Q6XE38 83 aa10.96□□□□□ -0.65
CACNA1A-209ENST00000587525 FAM74A4Q5TZK3 123 aa10.96□□□□□ -0.66
CACNA1A-209ENST00000587525 BCL6BQ8N143 479 aaPredicted RBP10.96□□□□□ -0.66
CACNA1A-209ENST00000587525 IGLC7A0M8Q6 106 aa10.95□□□□□ -0.66
CACNA1A-209ENST00000587525 KIR3DS1Q14943 382 aa10.95□□□□□ -0.66
CACNA1A-209ENST00000587525 BVES-AS1Q5T3Y7 98 aa10.95□□□□□ -0.66
CACNA1A-209ENST00000587525 A0A0G2JLM5 398 aa10.95□□□□□ -0.66
CACNA1A-209ENST00000587525 RBX1P62877 108 aa10.95□□□□□ -0.66
CACNA1A-209ENST00000587525 ZNF502Q8TBZ5 544 aa10.95□□□□□ -0.66
CACNA1A-209ENST00000587525 ST20Q9HBF5 79 aa10.95□□□□□ -0.66
CACNA1A-209ENST00000587525 Q8N7P7 452 aa10.95□□□□□ -0.66
CACNA1A-209ENST00000587525 SMIM12Q96EX1 92 aa10.95□□□□□ -0.66
CACNA1A-209ENST00000587525 C1orf159Q96HA4 380 aa10.95□□□□□ -0.66
CACNA1A-209ENST00000587525 FAM167A-AS1Q96KT0 104 aa10.95□□□□□ -0.66
CACNA1A-209ENST00000587525 RHOGP84095 191 aa10.94□□□□□ -0.66
CACNA1A-209ENST00000587525 C15orf32Q32M92 178 aa10.94□□□□□ -0.66
CACNA1A-209ENST00000587525 TMEM155Q4W5P6 130 aa10.94□□□□□ -0.66
CACNA1A-209ENST00000587525 GDF5OSQ5U4N7 250 aa10.94□□□□□ -0.66
CACNA1A-209ENST00000587525 GTSCR1Q86UQ5 136 aa10.94□□□□□ -0.66
CACNA1A-209ENST00000587525 HIST1H4GQ99525 98 aa10.94□□□□□ -0.66
CACNA1A-209ENST00000587525 K7ERJ3 54 aa10.94□□□□□ -0.66
CACNA1A-209ENST00000587525 SRSF9Q13242 221 aaKnown RBP eCLIP10.94□□□□□ -0.66
CACNA1A-209ENST00000587525 TMEM78Q5T7P6 136 aa10.94□□□□□ -0.66
CACNA1A-209ENST00000587525 ZNF418Q8TF45 676 aaPredicted RBP10.94□□□□□ -0.66
CACNA1A-209ENST00000587525 FMC1Q96HJ9 113 aa10.94□□□□□ -0.66
CACNA1A-209ENST00000587525 FOXC2Q99958 501 aa10.94□□□□□ -0.66
CACNA1A-209ENST00000587525 SAMD13Q5VXD3 122 aa10.94□□□□□ -0.66
CACNA1A-209ENST00000587525 ZNF833PQ6ZTB9 187 aa10.94□□□□□ -0.66
CACNA1A-209ENST00000587525 DUX5Q96PT3 197 aa10.94□□□□□ -0.66
CACNA1A-209ENST00000587525 DEFB1P60022 68 aa10.93□□□□□ -0.66
CACNA1A-209ENST00000587525 HIST1H1AQ02539 215 aaPredicted RBP10.93□□□□□ -0.66
CACNA1A-209ENST00000587525 MAPK1IP1LQ8NDC0 245 aa10.93□□□□□ -0.66
CACNA1A-209ENST00000587525 ITGB1BP1O14713 200 aa10.93□□□□□ -0.66
CACNA1A-209ENST00000587525 RPL7P18124 248 aaKnown RBP10.93□□□□□ -0.66
CACNA1A-209ENST00000587525 K7EP13 123 aa10.93□□□□□ -0.66
CACNA1A-209ENST00000587525 EIF4EBP1Q13541 118 aaPredicted RBP10.93□□□□□ -0.66
CACNA1A-209ENST00000587525 OTORQ9NRC9 128 aa10.93□□□□□ -0.66
CACNA1A-209ENST00000587525 JKAMPQ9P055 326 aa10.93□□□□□ -0.66
CACNA1A-209ENST00000587525 IGHV2-70DA0A0C4DH43 119 aa10.92□□□□□ -0.66
CACNA1A-209ENST00000587525 NDUFA3O95167 84 aa10.92□□□□□ -0.66
CACNA1A-209ENST00000587525 FAM106CPP0CH98 169 aa10.92□□□□□ -0.66
CACNA1A-209ENST00000587525 FER1L6-AS1Q8NA97 138 aa10.92□□□□□ -0.66
CACNA1A-209ENST00000587525 SMIM13P0DJ93 91 aa10.92□□□□□ -0.66
CACNA1A-209ENST00000587525 CLEC2AQ6UVW9 174 aa10.92□□□□□ -0.66
CACNA1A-209ENST00000587525 GATA4P43694 442 aa10.92□□□□□ -0.66
CACNA1A-209ENST00000587525 EMP1P54849 157 aa10.92□□□□□ -0.66
CACNA1A-209ENST00000587525 AMTNQ6UX39 209 aa10.92□□□□□ -0.66
CACNA1A-209ENST00000587525 C11orf52Q96A22 123 aa10.92□□□□□ -0.66
CACNA1A-209ENST00000587525 C1RLQ9NZP8 487 aa10.92□□□□□ -0.66
CACNA1A-209ENST00000587525 Q86TA4 180 aa10.91□□□□□ -0.66
CACNA1A-209ENST00000587525 CHODLQ9H9P2 273 aa10.91□□□□□ -0.66
CACNA1A-209ENST00000587525 MSRB1Q9NZV6 116 aa10.91□□□□□ -0.66
CACNA1A-209ENST00000587525 A0A1B0GWB2 263 aa10.91□□□□□ -0.66
CACNA1A-209ENST00000587525 SMIM27A0A1W2PRY6 76 aa10.91□□□□□ -0.66
CACNA1A-209ENST00000587525 TAX1BP3O14907 124 aa10.91□□□□□ -0.66
CACNA1A-209ENST00000587525 CDKN1BP46527 198 aa10.91□□□□□ -0.66
CACNA1A-209ENST00000587525 VMO1Q7Z5L0 202 aa10.91□□□□□ -0.66
CACNA1A-209ENST00000587525 PIP4P1Q86T03 277 aa10.91□□□□□ -0.66
CACNA1A-209ENST00000587525 MRPL27Q9P0M9 148 aaKnown RBP10.91□□□□□ -0.66
CACNA1A-209ENST00000587525 TRGV3P03979 118 aa10.91□□□□□ -0.66
CACNA1A-209ENST00000587525 GATA1P15976 413 aaPredicted RBP10.91□□□□□ -0.66
CACNA1A-209ENST00000587525 PSG3Q16557 428 aa10.91□□□□□ -0.66
CACNA1A-209ENST00000587525 PCP2Q8IVA1 136 aa10.91□□□□□ -0.66
CACNA1A-209ENST00000587525 TRAV26-2A0A0B4J265 109 aa10.9□□□□□ -0.66
CACNA1A-209ENST00000587525 CCDC144NLQ6NUI1 221 aa10.9□□□□□ -0.66
CACNA1A-209ENST00000587525 GTSF1Q8WW33 167 aa10.9□□□□□ -0.66
CACNA1A-209ENST00000587525 ADAMTS20P59510 1910 aa10.9□□□□□ -0.66
CACNA1A-209ENST00000587525 PRSS46E5RG02 174 aa10.9□□□□□ -0.66
CACNA1A-209ENST00000587525 IGLC1P0CG04 106 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms