RNA–Protein interactions for RNA: ENST00000586856.1

ERCC2-209, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-209ENST00000586856 BLNKQ8WV28 456 aa17.29■□□□□ 0.36
ERCC2-209ENST00000586856 TMEM208Q9BTX3 173 aa17.29■□□□□ 0.36
ERCC2-209ENST00000586856 TIMM9Q9Y5J7 89 aa17.29■□□□□ 0.36
ERCC2-209ENST00000586856 TRAV12-2A0A075B6T6 113 aa17.28■□□□□ 0.36
ERCC2-209ENST00000586856 HBE1P02100 147 aa17.28■□□□□ 0.36
ERCC2-209ENST00000586856 EMP1P54849 157 aa17.28■□□□□ 0.36
ERCC2-209ENST00000586856 OR10J6PQ8NGY7 276 aa17.28■□□□□ 0.36
ERCC2-209ENST00000586856 AQP10Q96PS8 301 aa17.28■□□□□ 0.36
ERCC2-209ENST00000586856 TMEM189A5PLL7 270 aa17.27■□□□□ 0.36
ERCC2-209ENST00000586856 Q6ZTC4 211 aa17.27■□□□□ 0.36
ERCC2-209ENST00000586856 MRPL53Q96EL3 112 aaKnown RBP17.27■□□□□ 0.36
ERCC2-209ENST00000586856 OR51M1Q9H341 326 aa17.27■□□□□ 0.36
ERCC2-209ENST00000586856 ALMS1Q8TCU4 4167 aa17.27■□□□□ 0.36
ERCC2-209ENST00000586856 LOC102723971A0A1B0GUV8 181 aa17.26■□□□□ 0.35
ERCC2-209ENST00000586856 M0R3E3 92 aa17.26■□□□□ 0.35
ERCC2-209ENST00000586856 RRN3P1Q2M238 152 aa17.26■□□□□ 0.35
ERCC2-209ENST00000586856 PAXXQ9BUH6 204 aa17.26■□□□□ 0.35
ERCC2-209ENST00000586856 LYSTQ99698 3801 aa17.26■□□□□ 0.35
ERCC2-209ENST00000586856 C11orf94C9JXX5 98 aa17.25■□□□□ 0.35
ERCC2-209ENST00000586856 OR10J4P0C629 311 aa17.25■□□□□ 0.35
ERCC2-209ENST00000586856 CDKN1BP46527 198 aa17.25■□□□□ 0.35
ERCC2-209ENST00000586856 C12orf74Q32Q52 190 aa17.25■□□□□ 0.35
ERCC2-209ENST00000586856 ZNF767PQ75MW2 155 aa17.25■□□□□ 0.35
ERCC2-209ENST00000586856 LINC00476Q8WZB0 136 aa17.25■□□□□ 0.35
ERCC2-209ENST00000586856 FXYD5Q96DB9 178 aa17.25■□□□□ 0.35
ERCC2-209ENST00000586856 NPIPB6E9PJ23 425 aa17.24■□□□□ 0.35
ERCC2-209ENST00000586856 OR7C2O60412 319 aa17.24■□□□□ 0.35
ERCC2-209ENST00000586856 ZNF266Q14584 549 aa17.24■□□□□ 0.35
ERCC2-209ENST00000586856 EXOC3-AS1Q8N2X6 119 aa17.24■□□□□ 0.35
ERCC2-209ENST00000586856 RPP25LQ8N5L8 163 aaKnown RBP17.24■□□□□ 0.35
ERCC2-209ENST00000586856 OR2T35Q8NGX2 323 aa17.24■□□□□ 0.35
ERCC2-209ENST00000586856 PRELID1Q9Y255 219 aa17.24■□□□□ 0.35
ERCC2-209ENST00000586856 DNAH1Q9P2D7 4330 aa17.24■□□□□ 0.35
ERCC2-209ENST00000586856 FXYD6-FXYD2A0A087WZ82 144 aa17.23■□□□□ 0.35
ERCC2-209ENST00000586856 NBEAP1P0C6P0 100 aa17.23■□□□□ 0.35
ERCC2-209ENST00000586856 C2CD4CQ8TF44 421 aa17.23■□□□□ 0.35
ERCC2-209ENST00000586856 AAMDCQ9H7C9 122 aa17.23■□□□□ 0.35
ERCC2-209ENST00000586856 PLECQ15149 4684 aaKnown RBP17.23■□□□□ 0.35
ERCC2-209ENST00000586856 TRAV10A0A0B4J240 114 aa17.22■□□□□ 0.35
ERCC2-209ENST00000586856 ZNF705GA8MUZ8 300 aaPredicted RBP17.22■□□□□ 0.35
ERCC2-209ENST00000586856 SPART-AS1P0CW21 52 aa17.22■□□□□ 0.35
ERCC2-209ENST00000586856 UBE2L3P68036 154 aaKnown RBP17.22■□□□□ 0.35
ERCC2-209ENST00000586856 KHDC3LQ587J8 217 aa17.22■□□□□ 0.35
ERCC2-209ENST00000586856 HSD17B11Q8NBQ5 300 aa17.22■□□□□ 0.35
ERCC2-209ENST00000586856 RNF141Q8WVD5 230 aa17.22■□□□□ 0.35
ERCC2-209ENST00000586856 ZNF503Q96F45 646 aa17.22■□□□□ 0.35
ERCC2-209ENST00000586856 PHYHIPLQ96FC7 376 aa17.22■□□□□ 0.35
ERCC2-209ENST00000586856 YTHDF2Q9Y5A9 579 aaKnown RBP17.22■□□□□ 0.35
ERCC2-209ENST00000586856 TSPOP30536 169 aa17.21■□□□□ 0.35
ERCC2-209ENST00000586856 TAS2R45P59539 299 aa17.21■□□□□ 0.35
ERCC2-209ENST00000586856 RAB2AP61019 212 aa17.21■□□□□ 0.35
ERCC2-209ENST00000586856 ICAM4Q14773 271 aa17.21■□□□□ 0.35
ERCC2-209ENST00000586856 ACOT6Q3I5F7 207 aaPredicted RBP17.21■□□□□ 0.35
ERCC2-209ENST00000586856 FAM222AQ5U5X8 452 aa17.21■□□□□ 0.35
ERCC2-209ENST00000586856 TMEM256Q8N2U0 113 aa17.21■□□□□ 0.35
ERCC2-209ENST00000586856 INO80EQ8NBZ0 244 aaPredicted RBP17.21■□□□□ 0.35
ERCC2-209ENST00000586856 ODF3Q96PU9 254 aa17.21■□□□□ 0.35
ERCC2-209ENST00000586856 DKK2Q9UBU2 259 aa17.21■□□□□ 0.35
ERCC2-209ENST00000586856 TEX48A0A1B0GUV7 120 aa17.2■□□□□ 0.34
ERCC2-209ENST00000586856 RNF222A6NCQ9 220 aa17.2■□□□□ 0.34
ERCC2-209ENST00000586856 EIF3GO75821 320 aaKnown RBP eCLIP17.2■□□□□ 0.34
ERCC2-209ENST00000586856 PRM2P04554 102 aa17.2■□□□□ 0.34
ERCC2-209ENST00000586856 CT45A10P0DMU9 189 aa17.2■□□□□ 0.34
ERCC2-209ENST00000586856 M6PRP20645 277 aa17.2■□□□□ 0.34
ERCC2-209ENST00000586856 KIR3DS1Q14943 382 aa17.2■□□□□ 0.34
ERCC2-209ENST00000586856 TNFSF18Q9UNG2 199 aa17.2■□□□□ 0.34
ERCC2-209ENST00000586856 G3V3Q6 166 aa17.19■□□□□ 0.34
ERCC2-209ENST00000586856 LEPP41159 167 aa17.19■□□□□ 0.34
ERCC2-209ENST00000586856 GFI1BQ5VTD9 330 aa17.19■□□□□ 0.34
ERCC2-209ENST00000586856 FAM122CQ6P4D5 195 aa17.19■□□□□ 0.34
ERCC2-209ENST00000586856 LINC01587Q99440 93 aa17.19■□□□□ 0.34
ERCC2-209ENST00000586856 LY6G6CO95867 125 aa17.18■□□□□ 0.34
ERCC2-209ENST00000586856 ERCC8Q13216 396 aa17.18■□□□□ 0.34
ERCC2-209ENST00000586856 OR2G3Q8NGZ4 309 aa17.18■□□□□ 0.34
ERCC2-209ENST00000586856 PSMG3Q9BT73 122 aaPredicted RBP17.18■□□□□ 0.34
ERCC2-209ENST00000586856 IGKV2-40A0A087WW87 121 aaPredicted RBP17.17■□□□□ 0.34
ERCC2-209ENST00000586856 DEFB131BA0A096LNP1 70 aa17.17■□□□□ 0.34
ERCC2-209ENST00000586856 IGLL5B9A064 214 aa17.17■□□□□ 0.34
ERCC2-209ENST00000586856 IGKV2D-40P01614 121 aaPredicted RBP17.17■□□□□ 0.34
ERCC2-209ENST00000586856 ATP6V0CP27449 155 aa17.17■□□□□ 0.34
ERCC2-209ENST00000586856 TAS2R60P59551 318 aa17.17■□□□□ 0.34
ERCC2-209ENST00000586856 C20orf144Q9BQM9 153 aa17.17■□□□□ 0.34
ERCC2-209ENST00000586856 A0A1W2PPV4 95 aa17.16■□□□□ 0.34
ERCC2-209ENST00000586856 J3KRW8 73 aa17.16■□□□□ 0.34
ERCC2-209ENST00000586856 OR10G4Q8NGN3 311 aa17.16■□□□□ 0.34
ERCC2-209ENST00000586856 OR10G9Q8NGN4 311 aa17.16■□□□□ 0.34
ERCC2-209ENST00000586856 OR10G7Q8NGN6 311 aa17.16■□□□□ 0.34
ERCC2-209ENST00000586856 NIPSNAP3BQ9BS92 247 aa17.16■□□□□ 0.34
ERCC2-209ENST00000586856 H7BYZ3 331 aa17.15■□□□□ 0.34
ERCC2-209ENST00000586856 AZU1P20160 251 aa17.15■□□□□ 0.34
ERCC2-209ENST00000586856 TCTAP57738 103 aa17.15■□□□□ 0.34
ERCC2-209ENST00000586856 RANP62826 216 aaKnown RBP17.15■□□□□ 0.34
ERCC2-209ENST00000586856 AGPAT4-IT1Q9H0P7 198 aa17.15■□□□□ 0.34
ERCC2-209ENST00000586856 SH3BGRL3Q9H299 93 aa17.15■□□□□ 0.34
ERCC2-209ENST00000586856 Q9H3A6 140 aa17.15■□□□□ 0.34
ERCC2-209ENST00000586856 PLAC8L1A1L4L8 177 aa17.14■□□□□ 0.33
ERCC2-209ENST00000586856 HTN1P15515 57 aa17.14■□□□□ 0.33
ERCC2-209ENST00000586856 RPL7L1Q6DKI1 246 aaKnown RBP17.14■□□□□ 0.33
ERCC2-209ENST00000586856 PQLC2Q6ZP29 291 aa17.14■□□□□ 0.33
ERCC2-209ENST00000586856 C9orf47Q6ZRZ4 202 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms