RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 Q6ZWC4 215 aa14.09□□□□□ -0.15
DDX39A-204ENST00000586558 PHYHIPLQ96FC7 376 aa14.09□□□□□ -0.15
DDX39A-204ENST00000586558 ZMAT4Q9H898 229 aa14.09□□□□□ -0.15
DDX39A-204ENST00000586558 A8MTW9 85 aa14.08□□□□□ -0.16
DDX39A-204ENST00000586558 F6UB75 175 aa14.08□□□□□ -0.16
DDX39A-204ENST00000586558 GCHFRP30047 84 aa14.08□□□□□ -0.16
DDX39A-204ENST00000586558 DEFB1P60022 68 aa14.08□□□□□ -0.16
DDX39A-204ENST00000586558 ZNF726P1Q15940 193 aa14.08□□□□□ -0.16
DDX39A-204ENST00000586558 OR8A1Q8NGG7 326 aa14.08□□□□□ -0.16
DDX39A-204ENST00000586558 TMEM167BQ9NRX6 74 aa14.08□□□□□ -0.16
DDX39A-204ENST00000586558 RAB5CP51148 216 aa14.07□□□□□ -0.16
DDX39A-204ENST00000586558 NKX2-5P52952 324 aaPredicted RBP14.07□□□□□ -0.16
DDX39A-204ENST00000586558 SSX7Q7RTT5 188 aa14.07□□□□□ -0.16
DDX39A-204ENST00000586558 SUN5Q8TC36 379 aa14.07□□□□□ -0.16
DDX39A-204ENST00000586558 CA1P00915 261 aaPredicted RBP14.06□□□□□ -0.16
DDX39A-204ENST00000586558 RANP62826 216 aaKnown RBP14.06□□□□□ -0.16
DDX39A-204ENST00000586558 ICAM4Q14773 271 aa14.06□□□□□ -0.16
DDX39A-204ENST00000586558 EXOC3-AS1Q8N2X6 119 aa14.06□□□□□ -0.16
DDX39A-204ENST00000586558 OR4B1Q8NGF8 309 aa14.06□□□□□ -0.16
DDX39A-204ENST00000586558 OR10J6PQ8NGY7 276 aa14.06□□□□□ -0.16
DDX39A-204ENST00000586558 C1QTNF4Q9BXJ3 329 aa14.06□□□□□ -0.16
DDX39A-204ENST00000586558 TP53TG1Q9Y2A0 90 aa14.06□□□□□ -0.16
DDX39A-204ENST00000586558 TGP01266 2768 aa14.05□□□□□ -0.16
DDX39A-204ENST00000586558 MAP1LC3B2A6NCE7 125 aa14.05□□□□□ -0.16
DDX39A-204ENST00000586558 ZNF705FA8MVS1 300 aaPredicted RBP14.05□□□□□ -0.16
DDX39A-204ENST00000586558 M0R3E3 92 aa14.05□□□□□ -0.16
DDX39A-204ENST00000586558 CNN1P51911 297 aaKnown RBP14.05□□□□□ -0.16
DDX39A-204ENST00000586558 HIST1H1AQ02539 215 aaPredicted RBP14.05□□□□□ -0.16
DDX39A-204ENST00000586558 FAM74A1Q5RGS3 127 aa14.05□□□□□ -0.16
DDX39A-204ENST00000586558 FAM213BQ8TBF2 198 aa14.05□□□□□ -0.16
DDX39A-204ENST00000586558 MAP1LC3BQ9GZQ8 125 aa14.05□□□□□ -0.16
DDX39A-204ENST00000586558 Q9H3A6 140 aa14.05□□□□□ -0.16
DDX39A-204ENST00000586558 OTORQ9NRC9 128 aa14.05□□□□□ -0.16
DDX39A-204ENST00000586558 PLA2G2EQ9NZK7 142 aa14.05□□□□□ -0.16
DDX39A-204ENST00000586558 IGKV3-20P01619 116 aa14.04□□□□□ -0.16
DDX39A-204ENST00000586558 FHITP49789 147 aa14.04□□□□□ -0.16
DDX39A-204ENST00000586558 PRAC2D3DTV9 90 aa14.03□□□□□ -0.16
DDX39A-204ENST00000586558 CSN1S1P47710 185 aa14.03□□□□□ -0.16
DDX39A-204ENST00000586558 DEFB135Q30KP9 77 aa14.03□□□□□ -0.16
DDX39A-204ENST00000586558 IQCF2Q8IXL9 164 aa14.03□□□□□ -0.16
DDX39A-204ENST00000586558 ARL6IP6Q8N6S5 226 aa14.03□□□□□ -0.16
DDX39A-204ENST00000586558 RXFP4Q8TDU9 374 aa14.03□□□□□ -0.16
DDX39A-204ENST00000586558 MBD3L1Q8WWY6 194 aa14.03□□□□□ -0.16
DDX39A-204ENST00000586558 NPIPB6E9PJ23 425 aa14.02□□□□□ -0.17
DDX39A-204ENST00000586558 AMBPP02760 352 aa14.02□□□□□ -0.17
DDX39A-204ENST00000586558 GIG44P09565 113 aaPredicted RBP14.02□□□□□ -0.17
DDX39A-204ENST00000586558 ZNF705DP0CH99 300 aaPredicted RBP14.02□□□□□ -0.17
DDX39A-204ENST00000586558 ZNF705BP0CI00 300 aaPredicted RBP14.02□□□□□ -0.17
DDX39A-204ENST00000586558 SULT1A2P50226 295 aa14.02□□□□□ -0.17
DDX39A-204ENST00000586558 AMTNQ6UX39 209 aa14.02□□□□□ -0.17
DDX39A-204ENST00000586558 RNF183Q96D59 192 aa14.02□□□□□ -0.17
DDX39A-204ENST00000586558 RCHY1Q96PM5 261 aa14.02□□□□□ -0.17
DDX39A-204ENST00000586558 U3KQK5 164 aa14.02□□□□□ -0.17
DDX39A-204ENST00000586558 NBEAL2Q6ZNJ1 2754 aa14.01□□□□□ -0.17
DDX39A-204ENST00000586558 SPRY2O43597 315 aa14.01□□□□□ -0.17
DDX39A-204ENST00000586558 FGF8P55075 233 aaPredicted RBP14.01□□□□□ -0.17
DDX39A-204ENST00000586558 CMTM2Q8TAZ6 248 aa14.01□□□□□ -0.17
DDX39A-204ENST00000586558 SFT2D1Q8WV19 159 aa14.01□□□□□ -0.17
DDX39A-204ENST00000586558 OVOL2Q9BRP0 275 aa14.01□□□□□ -0.17
DDX39A-204ENST00000586558 AGRNO00468 2067 aa14□□□□□ -0.17
DDX39A-204ENST00000586558 A0A1W2PRE2 83 aa14□□□□□ -0.17
DDX39A-204ENST00000586558 PGPA6NDG6 321 aa14□□□□□ -0.17
DDX39A-204ENST00000586558 BOLA2-SMG1P6H3BVE0 249 aa14□□□□□ -0.17
DDX39A-204ENST00000586558 H2AFB1P0C5Y9 115 aa14□□□□□ -0.17
DDX39A-204ENST00000586558 ODF3Q96PU9 254 aa14□□□□□ -0.17
DDX39A-204ENST00000586558 SLC35B3Q9H1N7 401 aa14□□□□□ -0.17
DDX39A-204ENST00000586558 RETNQ9HD89 108 aa14□□□□□ -0.17
DDX39A-204ENST00000586558 PPP1R14DQ9NXH3 145 aa14□□□□□ -0.17
DDX39A-204ENST00000586558 STAB2Q8WWQ8 2551 aa14□□□□□ -0.17
DDX39A-204ENST00000586558 COL7A1Q02388 2944 aa14□□□□□ -0.17
DDX39A-204ENST00000586558 RBAKDNA6NC62 111 aa13.99□□□□□ -0.17
DDX39A-204ENST00000586558 SLC25A5P05141 298 aaKnown RBP13.99□□□□□ -0.17
DDX39A-204ENST00000586558 C5orf17Q8NAS9 161 aa13.99□□□□□ -0.17
DDX39A-204ENST00000586558 LINC00477Q96M19 166 aa13.99□□□□□ -0.17
DDX39A-204ENST00000586558 NKX6-2Q9C056 277 aaPredicted RBP13.99□□□□□ -0.17
DDX39A-204ENST00000586558 TMPRSS5Q9H3S3 457 aa13.99□□□□□ -0.17
DDX39A-204ENST00000586558 XCL2Q9UBD3 114 aa13.99□□□□□ -0.17
DDX39A-204ENST00000586558 BOLA1Q9Y3E2 137 aa13.99□□□□□ -0.17
DDX39A-204ENST00000586558 ARL2-SNX15V9GYD0 113 aa13.99□□□□□ -0.17
DDX39A-204ENST00000586558 TRAV1-1A0A0B4J248 108 aa13.98□□□□□ -0.17
DDX39A-204ENST00000586558 TEX46H3BTG2 121 aa13.98□□□□□ -0.17
DDX39A-204ENST00000586558 TSPOP30536 169 aa13.98□□□□□ -0.17
DDX39A-204ENST00000586558 C9orf47Q6ZRZ4 202 aa13.98□□□□□ -0.17
DDX39A-204ENST00000586558 CSNK1G2-AS1Q8NCQ2 148 aa13.98□□□□□ -0.17
DDX39A-204ENST00000586558 TENM3Q9P273 2699 aa13.98□□□□□ -0.17
DDX39A-204ENST00000586558 IGKV2-40A0A087WW87 121 aaPredicted RBP13.97□□□□□ -0.17
DDX39A-204ENST00000586558 GGTLC3B5MD39 225 aa13.97□□□□□ -0.17
DDX39A-204ENST00000586558 DIRC3C9JPN6 131 aa13.97□□□□□ -0.17
DDX39A-204ENST00000586558 IGKV2D-40P01614 121 aaPredicted RBP13.97□□□□□ -0.17
DDX39A-204ENST00000586558 PRB4P10163 310 aaPredicted RBP13.97□□□□□ -0.17
DDX39A-204ENST00000586558 TMEM78Q5T7P6 136 aa13.97□□□□□ -0.17
DDX39A-204ENST00000586558 SERTM2A0A1B0GWG4 89 aa13.96□□□□□ -0.17
DDX39A-204ENST00000586558 M0R2Z0 102 aa13.96□□□□□ -0.17
DDX39A-204ENST00000586558 HBE1P02100 147 aa13.96□□□□□ -0.17
DDX39A-204ENST00000586558 LEPP41159 167 aa13.96□□□□□ -0.17
DDX39A-204ENST00000586558 PPT1P50897 306 aa13.96□□□□□ -0.17
DDX39A-204ENST00000586558 FXYD7P58549 80 aa13.96□□□□□ -0.17
DDX39A-204ENST00000586558 SUMO1P63165 101 aaKnown RBP13.96□□□□□ -0.17
DDX39A-204ENST00000586558 SPINK13Q1W4C9 94 aa13.96□□□□□ -0.17
DDX39A-204ENST00000586558 ALKAL2Q6UX46 152 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms