RNA–Protein interactions for RNA: ENST00000584939.1

ITGB4-213, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-213ENST00000584939 SMIM3Q9BZL3 60 aa12.22□□□□□ -0.45
ITGB4-213ENST00000584939 GIPP09681 153 aaPredicted RBP12.21□□□□□ -0.45
ITGB4-213ENST00000584939 PRB4P10163 310 aaPredicted RBP12.21□□□□□ -0.45
ITGB4-213ENST00000584939 RHOBP62745 196 aa12.21□□□□□ -0.45
ITGB4-213ENST00000584939 BAP18Q8IXM2 172 aa12.21□□□□□ -0.45
ITGB4-213ENST00000584939 OR1L4Q8NGR5 311 aa12.21□□□□□ -0.45
ITGB4-213ENST00000584939 PPP1R14DQ9NXH3 145 aa12.21□□□□□ -0.45
ITGB4-213ENST00000584939 TRAV12-2A0A075B6T6 113 aa12.2□□□□□ -0.46
ITGB4-213ENST00000584939 ZNF705GA8MUZ8 300 aaPredicted RBP12.2□□□□□ -0.46
ITGB4-213ENST00000584939 H3BTX0 84 aa12.2□□□□□ -0.46
ITGB4-213ENST00000584939 BOLA2-SMG1P6H3BVE0 249 aa12.2□□□□□ -0.46
ITGB4-213ENST00000584939 PRM2P04554 102 aa12.2□□□□□ -0.46
ITGB4-213ENST00000584939 BPIFA4PQ86YQ2 179 aa12.2□□□□□ -0.46
ITGB4-213ENST00000584939 RPUSD4Q96CM3 377 aaKnown RBP12.2□□□□□ -0.46
ITGB4-213ENST00000584939 FAM167A-AS1Q96KT0 104 aa12.2□□□□□ -0.46
ITGB4-213ENST00000584939 PFDN5Q99471 154 aa12.2□□□□□ -0.46
ITGB4-213ENST00000584939 PARD6GQ9BYG4 376 aaPredicted RBP12.2□□□□□ -0.46
ITGB4-213ENST00000584939 ZNF331Q9NQX6 463 aaPredicted RBP12.2□□□□□ -0.46
ITGB4-213ENST00000584939 ZNF586Q9NXT0 402 aa12.2□□□□□ -0.46
ITGB4-213ENST00000584939 P0DMU3 169 aa12.19□□□□□ -0.46
ITGB4-213ENST00000584939 FAM231AP0DMU4 169 aa12.19□□□□□ -0.46
ITGB4-213ENST00000584939 FAM231CP0DMU5 169 aa12.19□□□□□ -0.46
ITGB4-213ENST00000584939 HTN3P15516 51 aa12.19□□□□□ -0.46
ITGB4-213ENST00000584939 CXCL2P19875 107 aa12.19□□□□□ -0.46
ITGB4-213ENST00000584939 LCN15Q6UWW0 184 aa12.19□□□□□ -0.46
ITGB4-213ENST00000584939 SLC50A1Q9BRV3 221 aa12.19□□□□□ -0.46
ITGB4-213ENST00000584939 DAD1P61803 113 aa12.18□□□□□ -0.46
ITGB4-213ENST00000584939 MIR17HGQ75NE6 70 aa12.18□□□□□ -0.46
ITGB4-213ENST00000584939 POM121L12Q8N7R1 296 aa12.18□□□□□ -0.46
ITGB4-213ENST00000584939 ASB13Q8WXK3 278 aa12.18□□□□□ -0.46
ITGB4-213ENST00000584939 FAM210BQ96KR6 192 aa12.18□□□□□ -0.46
ITGB4-213ENST00000584939 AQP10Q96PS8 301 aa12.18□□□□□ -0.46
ITGB4-213ENST00000584939 SLC25A2Q9BXI2 301 aa12.18□□□□□ -0.46
ITGB4-213ENST00000584939 RNF222A6NCQ9 220 aa12.17□□□□□ -0.46
ITGB4-213ENST00000584939 NDUFB4O95168 129 aa12.17□□□□□ -0.46
ITGB4-213ENST00000584939 PYYP10082 97 aa12.17□□□□□ -0.46
ITGB4-213ENST00000584939 LINC01587Q99440 93 aa12.17□□□□□ -0.46
ITGB4-213ENST00000584939 TMEM14CQ9P0S9 112 aa12.17□□□□□ -0.46
ITGB4-213ENST00000584939 PRAC2D3DTV9 90 aa12.16□□□□□ -0.46
ITGB4-213ENST00000584939 AZU1P20160 251 aa12.16□□□□□ -0.46
ITGB4-213ENST00000584939 ZNF503Q96F45 646 aa12.16□□□□□ -0.46
ITGB4-213ENST00000584939 TSPOP30536 169 aa12.15□□□□□ -0.46
ITGB4-213ENST00000584939 TMEM256Q8N2U0 113 aa12.15□□□□□ -0.46
ITGB4-213ENST00000584939 VPS13DQ5THJ4 4388 aa12.14□□□□□ -0.47
ITGB4-213ENST00000584939 TRBV19A0A075B6N1 114 aa12.14□□□□□ -0.47
ITGB4-213ENST00000584939 LYRM9A8MSI8 78 aa12.14□□□□□ -0.47
ITGB4-213ENST00000584939 C17orf112F2Z3M2 114 aa12.14□□□□□ -0.47
ITGB4-213ENST00000584939 ZNF253O75346 499 aa12.14□□□□□ -0.47
ITGB4-213ENST00000584939 CDKN1BP46527 198 aa12.14□□□□□ -0.47
ITGB4-213ENST00000584939 TAS2R60P59551 318 aa12.14□□□□□ -0.47
ITGB4-213ENST00000584939 FFAR4Q5NUL3 377 aa12.14□□□□□ -0.47
ITGB4-213ENST00000584939 OR2T35Q8NGX2 323 aa12.14□□□□□ -0.47
ITGB4-213ENST00000584939 OR10J6PQ8NGY7 276 aa12.14□□□□□ -0.47
ITGB4-213ENST00000584939 TNFSF18Q9UNG2 199 aa12.14□□□□□ -0.47
ITGB4-213ENST00000584939 PLAC8L1A1L4L8 177 aa12.13□□□□□ -0.47
ITGB4-213ENST00000584939 IFNA5P01569 189 aa12.13□□□□□ -0.47
ITGB4-213ENST00000584939 DEFB130BP0DP73 79 aa12.13□□□□□ -0.47
ITGB4-213ENST00000584939 DEFB130AP0DP74 79 aa12.13□□□□□ -0.47
ITGB4-213ENST00000584939 HIST1H1EP10412 219 aaKnown RBP12.13□□□□□ -0.47
ITGB4-213ENST00000584939 HTN1P15515 57 aa12.13□□□□□ -0.47
ITGB4-213ENST00000584939 GUK1Q16774 197 aa12.13□□□□□ -0.47
ITGB4-213ENST00000584939 TMEM88Q6PEY1 159 aa12.13□□□□□ -0.47
ITGB4-213ENST00000584939 MRPL32Q9BYC8 188 aaKnown RBP12.13□□□□□ -0.47
ITGB4-213ENST00000584939 KCNIP2Q9NS61 270 aa12.13□□□□□ -0.47
ITGB4-213ENST00000584939 FUT9Q9Y231 359 aa12.13□□□□□ -0.47
ITGB4-213ENST00000584939 EIF3GO75821 320 aaKnown RBP eCLIP12.12□□□□□ -0.47
ITGB4-213ENST00000584939 UBE2DNLQ8IWF7 75 aa12.12□□□□□ -0.47
ITGB4-213ENST00000584939 SCGB1C1Q8TD33 95 aa12.12□□□□□ -0.47
ITGB4-213ENST00000584939 FXYD5Q96DB9 178 aa12.12□□□□□ -0.47
ITGB4-213ENST00000584939 FXYD6-FXYD2A0A087WZ82 144 aa12.11□□□□□ -0.47
ITGB4-213ENST00000584939 SMLR1H3BR10 107 aa12.11□□□□□ -0.47
ITGB4-213ENST00000584939 M0R3E3 92 aa12.11□□□□□ -0.47
ITGB4-213ENST00000584939 KIR3DS1Q14943 382 aa12.11□□□□□ -0.47
ITGB4-213ENST00000584939 C16orf74Q96GX8 76 aa12.11□□□□□ -0.47
ITGB4-213ENST00000584939 TIMM9Q9Y5J7 89 aa12.11□□□□□ -0.47
ITGB4-213ENST00000584939 M0R2N4 97 aa12.1□□□□□ -0.47
ITGB4-213ENST00000584939 PDE6HQ13956 83 aa12.1□□□□□ -0.47
ITGB4-213ENST00000584939 C20orf144Q9BQM9 153 aa12.1□□□□□ -0.47
ITGB4-213ENST00000584939 OR51M1Q9H341 326 aa12.1□□□□□ -0.47
ITGB4-213ENST00000584939 FRAS1Q86XX4 4008 aa12.09□□□□□ -0.47
ITGB4-213ENST00000584939 H7BYZ3 331 aa12.09□□□□□ -0.47
ITGB4-213ENST00000584939 OR10J4P0C629 311 aa12.09□□□□□ -0.47
ITGB4-213ENST00000584939 NBEAP1P0C6P0 100 aa12.09□□□□□ -0.47
ITGB4-213ENST00000584939 ATP6V0CP27449 155 aa12.09□□□□□ -0.47
ITGB4-213ENST00000584939 RAB2AP61019 212 aa12.09□□□□□ -0.47
ITGB4-213ENST00000584939 ZNF493Q6ZR52 646 aa12.09□□□□□ -0.47
ITGB4-213ENST00000584939 EXOC3-AS1Q8N2X6 119 aa12.09□□□□□ -0.47
ITGB4-213ENST00000584939 HSD17B11Q8NBQ5 300 aa12.09□□□□□ -0.47
ITGB4-213ENST00000584939 OR2G3Q8NGZ4 309 aa12.09□□□□□ -0.47
ITGB4-213ENST00000584939 BLNKQ8WV28 456 aa12.09□□□□□ -0.47
ITGB4-213ENST00000584939 PAXXQ9BUH6 204 aa12.09□□□□□ -0.47
ITGB4-213ENST00000584939 TIMM8BQ9Y5J9 83 aaPredicted RBP12.09□□□□□ -0.47
ITGB4-213ENST00000584939 DNAH6Q9C0G6 4158 aa12.08□□□□□ -0.47
ITGB4-213ENST00000584939 CBY3A6NI87 242 aa12.08□□□□□ -0.48
ITGB4-213ENST00000584939 F5H768 121 aa12.08□□□□□ -0.48
ITGB4-213ENST00000584939 CT45A10P0DMU9 189 aa12.08□□□□□ -0.48
ITGB4-213ENST00000584939 M6PRP20645 277 aa12.08□□□□□ -0.48
ITGB4-213ENST00000584939 ZNF266Q14584 549 aa12.08□□□□□ -0.48
ITGB4-213ENST00000584939 RNF212Q495C1 297 aa12.08□□□□□ -0.48
ITGB4-213ENST00000584939 GFI1BQ5VTD9 330 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms