RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 MRPL53Q96EL3 112 aaKnown RBP12.2□□□□□ -0.46
CDK5RAP3-228ENST00000583363 LINC00052Q96N35 136 aa12.2□□□□□ -0.46
CDK5RAP3-228ENST00000583363 TXNDC17Q9BRA2 123 aa12.2□□□□□ -0.46
CDK5RAP3-228ENST00000583363 C11orf94C9JXX5 98 aa12.19□□□□□ -0.46
CDK5RAP3-228ENST00000583363 SNRPD3P62318 126 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-228ENST00000583363 ARL6IP6Q8N6S5 226 aa12.19□□□□□ -0.46
CDK5RAP3-228ENST00000583363 RXFP4Q8TDU9 374 aa12.19□□□□□ -0.46
CDK5RAP3-228ENST00000583363 EIF5A2Q9GZV4 153 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-228ENST00000583363 RAB19A4D1S5 217 aa12.18□□□□□ -0.46
CDK5RAP3-228ENST00000583363 ZNF705FA8MVS1 300 aaPredicted RBP12.18□□□□□ -0.46
CDK5RAP3-228ENST00000583363 G3V4G9 280 aa12.18□□□□□ -0.46
CDK5RAP3-228ENST00000583363 M0R3E3 92 aa12.18□□□□□ -0.46
CDK5RAP3-228ENST00000583363 SLC25A5P05141 298 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-228ENST00000583363 ZNF688P0C7X2 276 aa12.18□□□□□ -0.46
CDK5RAP3-228ENST00000583363 CMC4P56277 68 aaPredicted RBP12.18□□□□□ -0.46
CDK5RAP3-228ENST00000583363 CD81P60033 236 aa12.18□□□□□ -0.46
CDK5RAP3-228ENST00000583363 MEF2BQ02080 365 aaPredicted RBP12.18□□□□□ -0.46
CDK5RAP3-228ENST00000583363 TOR2AQ5JU69 321 aa12.18□□□□□ -0.46
CDK5RAP3-228ENST00000583363 EPDR1Q9UM22 224 aa12.18□□□□□ -0.46
CDK5RAP3-228ENST00000583363 CSN1S1P47710 185 aa12.17□□□□□ -0.46
CDK5RAP3-228ENST00000583363 SRSF3P84103 164 aaKnown RBP12.17□□□□□ -0.46
CDK5RAP3-228ENST00000583363 PEA15Q15121 130 aa12.17□□□□□ -0.46
CDK5RAP3-228ENST00000583363 PSMG4Q5JS54 123 aa12.17□□□□□ -0.46
CDK5RAP3-228ENST00000583363 C5orf17Q8NAS9 161 aa12.17□□□□□ -0.46
CDK5RAP3-228ENST00000583363 CMTM2Q8TAZ6 248 aa12.17□□□□□ -0.46
CDK5RAP3-228ENST00000583363 DIRC3C9JPN6 131 aa12.16□□□□□ -0.46
CDK5RAP3-228ENST00000583363 PRAC2D3DTV9 90 aa12.16□□□□□ -0.46
CDK5RAP3-228ENST00000583363 NDUFS6O75380 124 aaKnown RBP12.16□□□□□ -0.46
CDK5RAP3-228ENST00000583363 DEFB131AP59861 70 aa12.16□□□□□ -0.46
CDK5RAP3-228ENST00000583363 GNG5P63218 68 aa12.16□□□□□ -0.46
CDK5RAP3-228ENST00000583363 EGFEM1PQ0D2K5 195 aa12.16□□□□□ -0.46
CDK5RAP3-228ENST00000583363 SAMD5Q5TGI4 173 aa12.16□□□□□ -0.46
CDK5RAP3-228ENST00000583363 ZNF738Q8NE65 137 aa12.16□□□□□ -0.46
CDK5RAP3-228ENST00000583363 RPUSD4Q96CM3 377 aaKnown RBP12.16□□□□□ -0.46
CDK5RAP3-228ENST00000583363 FAM110AQ9BQ89 295 aa12.16□□□□□ -0.46
CDK5RAP3-228ENST00000583363 TCEAL7Q9BRU2 100 aa12.16□□□□□ -0.46
CDK5RAP3-228ENST00000583363 SMDT1Q9H4I9 107 aa12.16□□□□□ -0.46
CDK5RAP3-228ENST00000583363 MAP6D1Q9H9H5 199 aa12.16□□□□□ -0.46
CDK5RAP3-228ENST00000583363 PRB2P02812 416 aaPredicted RBP12.15□□□□□ -0.46
CDK5RAP3-228ENST00000583363 TCRAP04437 139 aa12.15□□□□□ -0.46
CDK5RAP3-228ENST00000583363 CD7P09564 240 aa12.15□□□□□ -0.46
CDK5RAP3-228ENST00000583363 ODF3L2Q3SX64 289 aa12.15□□□□□ -0.46
CDK5RAP3-228ENST00000583363 COMMD7Q86VX2 200 aa12.15□□□□□ -0.46
CDK5RAP3-228ENST00000583363 HIST1H2BAQ96A08 127 aa12.15□□□□□ -0.46
CDK5RAP3-228ENST00000583363 C19orf73Q9NVV2 129 aa12.15□□□□□ -0.46
CDK5RAP3-228ENST00000583363 DNAH3Q8TD57 4116 aa12.14□□□□□ -0.47
CDK5RAP3-228ENST00000583363 C9JQL5 133 aa12.14□□□□□ -0.47
CDK5RAP3-228ENST00000583363 F6UZH7 168 aa12.14□□□□□ -0.47
CDK5RAP3-228ENST00000583363 PDE6DO43924 150 aa12.14□□□□□ -0.47
CDK5RAP3-228ENST00000583363 SRP19P09132 144 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-228ENST00000583363 PRB4P10163 310 aaPredicted RBP12.14□□□□□ -0.47
CDK5RAP3-228ENST00000583363 DEFB1P60022 68 aa12.14□□□□□ -0.47
CDK5RAP3-228ENST00000583363 KRTAP10-11P60412 298 aa12.14□□□□□ -0.47
CDK5RAP3-228ENST00000583363 KPRPQ5T749 579 aaPredicted RBP12.14□□□□□ -0.47
CDK5RAP3-228ENST00000583363 ZMAT5Q9UDW3 170 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-228ENST00000583363 KMT2CQ8NEZ4 4911 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-228ENST00000583363 SCO2A0A1W2PP80 73 aa12.13□□□□□ -0.47
CDK5RAP3-228ENST00000583363 OR11H12B2RN74 326 aa12.13□□□□□ -0.47
CDK5RAP3-228ENST00000583363 PEX7O00628 323 aa12.13□□□□□ -0.47
CDK5RAP3-228ENST00000583363 EIF4E3Q8N5X7 224 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-228ENST00000583363 C11orf52Q96A22 123 aa12.13□□□□□ -0.47
CDK5RAP3-228ENST00000583363 ATG101Q9BSB4 218 aa12.13□□□□□ -0.47
CDK5RAP3-228ENST00000583363 RPH3ALQ9UNE2 315 aa12.13□□□□□ -0.47
CDK5RAP3-228ENST00000583363 SERTM2A0A1B0GWG4 89 aa12.12□□□□□ -0.47
CDK5RAP3-228ENST00000583363 RBAKDNA6NC62 111 aa12.12□□□□□ -0.47
CDK5RAP3-228ENST00000583363 F6UB75 175 aa12.12□□□□□ -0.47
CDK5RAP3-228ENST00000583363 TMEM250H0YL14 139 aa12.12□□□□□ -0.47
CDK5RAP3-228ENST00000583363 UQCC3Q6UW78 93 aa12.12□□□□□ -0.47
CDK5RAP3-228ENST00000583363 FOXI2Q6ZQN5 318 aa12.12□□□□□ -0.47
CDK5RAP3-228ENST00000583363 GOLT1AQ6ZVE7 132 aa12.12□□□□□ -0.47
CDK5RAP3-228ENST00000583363 APRG1Q8IVJ8 170 aa12.12□□□□□ -0.47
CDK5RAP3-228ENST00000583363 Q8N1Y9 231 aa12.12□□□□□ -0.47
CDK5RAP3-228ENST00000583363 CYB561D1Q8N8Q1 229 aa12.12□□□□□ -0.47
CDK5RAP3-228ENST00000583363 OR8A1Q8NGG7 326 aa12.12□□□□□ -0.47
CDK5RAP3-228ENST00000583363 LINC00479Q96M42 142 aa12.12□□□□□ -0.47
CDK5RAP3-228ENST00000583363 SAV1Q9H4B6 383 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-228ENST00000583363 TREM1Q9NP99 234 aa12.12□□□□□ -0.47
CDK5RAP3-228ENST00000583363 NBEAL2Q6ZNJ1 2754 aa12.11□□□□□ -0.47
CDK5RAP3-228ENST00000583363 IGKV2-40A0A087WW87 121 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP3-228ENST00000583363 A0A0J9YX75 114 aa12.11□□□□□ -0.47
CDK5RAP3-228ENST00000583363 KNCNA6PVL3 124 aa12.11□□□□□ -0.47
CDK5RAP3-228ENST00000583363 IGKV2D-40P01614 121 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP3-228ENST00000583363 ZNF705DP0CH99 300 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP3-228ENST00000583363 ZNF705BP0CI00 300 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP3-228ENST00000583363 ZNF124Q15973 351 aa12.11□□□□□ -0.47
CDK5RAP3-228ENST00000583363 GDF5OSQ5U4N7 250 aa12.11□□□□□ -0.47
CDK5RAP3-228ENST00000583363 EBLN2Q6P2I7 272 aa12.11□□□□□ -0.47
CDK5RAP3-228ENST00000583363 C9orf47Q6ZRZ4 202 aa12.11□□□□□ -0.47
CDK5RAP3-228ENST00000583363 GTSCR1Q86UQ5 136 aa12.11□□□□□ -0.47
CDK5RAP3-228ENST00000583363 C2CD4CQ8TF44 421 aa12.11□□□□□ -0.47
CDK5RAP3-228ENST00000583363 VGLL1Q99990 258 aa12.11□□□□□ -0.47
CDK5RAP3-228ENST00000583363 SLC35B3Q9H1N7 401 aa12.11□□□□□ -0.47
CDK5RAP3-228ENST00000583363 KLF12Q9Y4X4 402 aa12.11□□□□□ -0.47
CDK5RAP3-228ENST00000583363 K7EQM0 130 aa12.1□□□□□ -0.47
CDK5RAP3-228ENST00000583363 ERCC8Q13216 396 aa12.1□□□□□ -0.47
CDK5RAP3-228ENST00000583363 NDUFA5Q16718 116 aa12.1□□□□□ -0.47
CDK5RAP3-228ENST00000583363 OR10J6PQ8NGY7 276 aa12.1□□□□□ -0.47
CDK5RAP3-228ENST00000583363 LINC00477Q96M19 166 aa12.1□□□□□ -0.47
CDK5RAP3-228ENST00000583363 PRR25Q96S07 402 aa12.1□□□□□ -0.47
CDK5RAP3-228ENST00000583363 AGPAT4-IT1Q9H0P7 198 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms