RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 RPH3ALQ9UNE2 315 aa11.05□□□□□ -0.64
SENP3-208ENST00000583277 COL6A5A8TX70 2615 aa11.04□□□□□ -0.64
SENP3-208ENST00000583277 IGKV3-7A0A075B6H7 116 aa11.04□□□□□ -0.64
SENP3-208ENST00000583277 TRAV2A0A0B4J234 112 aa11.04□□□□□ -0.64
SENP3-208ENST00000583277 TRAV8-2A0A0B4J237 113 aa11.04□□□□□ -0.64
SENP3-208ENST00000583277 TRAV25A0A0B4J276 109 aa11.04□□□□□ -0.64
SENP3-208ENST00000583277 M0R3E3 92 aa11.04□□□□□ -0.64
SENP3-208ENST00000583277 DNASE2O00115 360 aaPredicted RBP11.04□□□□□ -0.64
SENP3-208ENST00000583277 RPL35P42766 123 aaKnown RBP11.04□□□□□ -0.64
SENP3-208ENST00000583277 C12orf54Q6X4T0 127 aa11.04□□□□□ -0.64
SENP3-208ENST00000583277 RBPMS2Q6ZRY4 209 aaKnown RBP11.04□□□□□ -0.64
SENP3-208ENST00000583277 SVBPQ8N300 66 aa11.04□□□□□ -0.64
SENP3-208ENST00000583277 C3orf56Q8N813 242 aa11.04□□□□□ -0.64
SENP3-208ENST00000583277 DCANP1Q8TF63 244 aa11.04□□□□□ -0.64
SENP3-208ENST00000583277 STAB1Q9NY15 2570 aa11.04□□□□□ -0.64
SENP3-208ENST00000583277 C9JCJ5 164 aa11.03□□□□□ -0.64
SENP3-208ENST00000583277 DIRC3C9JPN6 131 aa11.03□□□□□ -0.64
SENP3-208ENST00000583277 TSPAN4O14817 238 aa11.03□□□□□ -0.64
SENP3-208ENST00000583277 APOC3P02656 99 aa11.03□□□□□ -0.64
SENP3-208ENST00000583277 DEFB114Q30KQ6 69 aa11.03□□□□□ -0.64
SENP3-208ENST00000583277 FMC1Q96HJ9 113 aa11.03□□□□□ -0.64
SENP3-208ENST00000583277 DERL1Q9BUN8 251 aa11.03□□□□□ -0.64
SENP3-208ENST00000583277 VWFP04275 2813 aa11.03□□□□□ -0.64
SENP3-208ENST00000583277 FBLL1A6NHQ2 334 aaKnown RBP11.03□□□□□ -0.64
SENP3-208ENST00000583277 TAS2R60P59551 318 aa11.03□□□□□ -0.64
SENP3-208ENST00000583277 UBE2G1P62253 170 aa11.03□□□□□ -0.64
SENP3-208ENST00000583277 SNRPD3P62318 126 aaKnown RBP11.03□□□□□ -0.64
SENP3-208ENST00000583277 PNRC1Q12796 327 aaPredicted RBP11.03□□□□□ -0.64
SENP3-208ENST00000583277 PSG3Q16557 428 aa11.03□□□□□ -0.64
SENP3-208ENST00000583277 TMEM183BQ1AE95 376 aa11.03□□□□□ -0.64
SENP3-208ENST00000583277 LCN12Q6JVE5 192 aa11.03□□□□□ -0.64
SENP3-208ENST00000583277 SHISA2Q6UWI4 295 aa11.03□□□□□ -0.64
SENP3-208ENST00000583277 GOLT1AQ6ZVE7 132 aa11.03□□□□□ -0.64
SENP3-208ENST00000583277 GBGT1Q8N5D6 347 aa11.03□□□□□ -0.64
SENP3-208ENST00000583277 RNF182Q8N6D2 247 aa11.03□□□□□ -0.64
SENP3-208ENST00000583277 TMEM75Q8N9X5 138 aa11.03□□□□□ -0.64
SENP3-208ENST00000583277 NAT8Q9UHE5 227 aa11.03□□□□□ -0.64
SENP3-208ENST00000583277 KLF12Q9Y4X4 402 aa11.03□□□□□ -0.64
SENP3-208ENST00000583277 K7EQG2 157 aa11.02□□□□□ -0.65
SENP3-208ENST00000583277 SAP30O75446 220 aa11.02□□□□□ -0.65
SENP3-208ENST00000583277 HLA-DMBP28068 263 aa11.02□□□□□ -0.65
SENP3-208ENST00000583277 TMEM241Q24JQ0 296 aa11.02□□□□□ -0.65
SENP3-208ENST00000583277 IGFL4Q6B9Z1 124 aa11.02□□□□□ -0.65
SENP3-208ENST00000583277 TMEM61Q8N0U2 210 aa11.02□□□□□ -0.65
SENP3-208ENST00000583277 OR2K2Q8NGT1 345 aa11.02□□□□□ -0.65
SENP3-208ENST00000583277 SPAG8Q99932 426 aaPredicted RBP11.02□□□□□ -0.65
SENP3-208ENST00000583277 SELENOKQ9Y6D0 94 aa11.02□□□□□ -0.65
SENP3-208ENST00000583277 TRBV6-1A0A0K0K1D8 114 aa11.01□□□□□ -0.65
SENP3-208ENST00000583277 RBAKDNA6NC62 111 aa11.01□□□□□ -0.65
SENP3-208ENST00000583277 GNG4P50150 75 aa11.01□□□□□ -0.65
SENP3-208ENST00000583277 GUCA2BQ16661 112 aa11.01□□□□□ -0.65
SENP3-208ENST00000583277 CD300EQ496F6 205 aaPredicted RBP11.01□□□□□ -0.65
SENP3-208ENST00000583277 CENPWQ5EE01 88 aa11.01□□□□□ -0.65
SENP3-208ENST00000583277 ZNF738Q8NE65 137 aa11.01□□□□□ -0.65
SENP3-208ENST00000583277 TVP23CQ96ET8 276 aa11.01□□□□□ -0.65
SENP3-208ENST00000583277 LY96Q9Y6Y9 160 aa11.01□□□□□ -0.65
SENP3-208ENST00000583277 SNAPINO95295 136 aa11□□□□□ -0.65
SENP3-208ENST00000583277 TFPI2P48307 235 aa11□□□□□ -0.65
SENP3-208ENST00000583277 WFDC3Q8IUB2 231 aa11□□□□□ -0.65
SENP3-208ENST00000583277 SMIM12Q96EX1 92 aa11□□□□□ -0.65
SENP3-208ENST00000583277 C20orf173Q96LM9 149 aa11□□□□□ -0.65
SENP3-208ENST00000583277 TRBV20OR9-2A0A075B6H5 130 aa10.99□□□□□ -0.65
SENP3-208ENST00000583277 TRAV34A0A0B4J273 112 aa10.99□□□□□ -0.65
SENP3-208ENST00000583277 OR4C46A6NHA9 309 aa10.99□□□□□ -0.65
SENP3-208ENST00000583277 ZNF705FA8MVS1 300 aaPredicted RBP10.99□□□□□ -0.65
SENP3-208ENST00000583277 Q86TA4 180 aa10.99□□□□□ -0.65
SENP3-208ENST00000583277 IGF2BP2-AS1Q96M15 143 aa10.99□□□□□ -0.65
SENP3-208ENST00000583277 LINC00479Q96M42 142 aa10.99□□□□□ -0.65
SENP3-208ENST00000583277 SDF2L1Q9HCN8 221 aa10.99□□□□□ -0.65
SENP3-208ENST00000583277 IGKV2-40A0A087WW87 121 aaPredicted RBP10.99□□□□□ -0.65
SENP3-208ENST00000583277 M0R036 132 aa10.99□□□□□ -0.65
SENP3-208ENST00000583277 IGKV2D-40P01614 121 aaPredicted RBP10.99□□□□□ -0.65
SENP3-208ENST00000583277 IGLV1-51P01701 117 aa10.99□□□□□ -0.65
SENP3-208ENST00000583277 INSL3P51460 131 aa10.99□□□□□ -0.65
SENP3-208ENST00000583277 FLI1Q01543 452 aaPredicted RBP10.99□□□□□ -0.65
SENP3-208ENST00000583277 MCRIP2Q9BUT9 160 aaKnown RBP10.99□□□□□ -0.65
SENP3-208ENST00000583277 TRAV8-1A0A0A6YYK1 113 aa10.98□□□□□ -0.65
SENP3-208ENST00000583277 LTAP01374 205 aa10.98□□□□□ -0.65
SENP3-208ENST00000583277 IGLV2-11P01706 119 aa10.98□□□□□ -0.65
SENP3-208ENST00000583277 ZNF688P0C7X2 276 aa10.98□□□□□ -0.65
SENP3-208ENST00000583277 ADIRFQ15847 76 aa10.98□□□□□ -0.65
SENP3-208ENST00000583277 LINC01551Q86U37 167 aa10.98□□□□□ -0.65
SENP3-208ENST00000583277 BAGE2Q86Y30 109 aa10.98□□□□□ -0.65
SENP3-208ENST00000583277 CLRN3Q8NCR9 226 aa10.98□□□□□ -0.65
SENP3-208ENST00000583277 PSG8Q9UQ74 426 aa10.98□□□□□ -0.65
SENP3-208ENST00000583277 B4DEV8 164 aa10.97□□□□□ -0.65
SENP3-208ENST00000583277 PRAC2D3DTV9 90 aa10.97□□□□□ -0.65
SENP3-208ENST00000583277 CD33P20138 364 aa10.97□□□□□ -0.65
SENP3-208ENST00000583277 RPL23P62829 140 aaKnown RBP10.97□□□□□ -0.65
SENP3-208ENST00000583277 RHEBQ15382 184 aa10.97□□□□□ -0.65
SENP3-208ENST00000583277 PSMG4Q5JS54 123 aa10.97□□□□□ -0.65
SENP3-208ENST00000583277 C9orf66Q5T8R8 295 aa10.97□□□□□ -0.65
SENP3-208ENST00000583277 PRNTQ86SH4 94 aa10.97□□□□□ -0.65
SENP3-208ENST00000583277 OR10J6PQ8NGY7 276 aa10.97□□□□□ -0.65
SENP3-208ENST00000583277 ZFP30Q9Y2G7 519 aa10.97□□□□□ -0.65
SENP3-208ENST00000583277 SORL1Q92673 2214 aa10.96□□□□□ -0.65
SENP3-208ENST00000583277 TMEM78Q5T7P6 136 aa10.96□□□□□ -0.65
SENP3-208ENST00000583277 C9orf47Q6ZRZ4 202 aa10.96□□□□□ -0.65
SENP3-208ENST00000583277 FAM24BQ8N5W8 94 aa10.96□□□□□ -0.65
SENP3-208ENST00000583277 SGK494Q96LW2 274 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms