RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 RNF141Q8WVD5 230 aa9.09□□□□□ -0.95
SNORD55-201ENST00000581525 TMEM189A5PLL7 270 aa9.08□□□□□ -0.96
SNORD55-201ENST00000581525 BOLA2-SMG1P6H3BVE0 249 aa9.08□□□□□ -0.96
SNORD55-201ENST00000581525 FXYD7P58549 80 aa9.08□□□□□ -0.96
SNORD55-201ENST00000581525 ACOT6Q3I5F7 207 aaPredicted RBP9.08□□□□□ -0.96
SNORD55-201ENST00000581525 CEMP1Q6PRD7 247 aaPredicted RBP9.08□□□□□ -0.96
SNORD55-201ENST00000581525 ARL6IP6Q8N6S5 226 aa9.08□□□□□ -0.96
SNORD55-201ENST00000581525 C11orf45Q8TAV5 145 aa9.08□□□□□ -0.96
SNORD55-201ENST00000581525 C20orf144Q9BQM9 153 aa9.08□□□□□ -0.96
SNORD55-201ENST00000581525 PAXXQ9BUH6 204 aa9.08□□□□□ -0.96
SNORD55-201ENST00000581525 NUPR2A6NF83 97 aa9.07□□□□□ -0.96
SNORD55-201ENST00000581525 HMSDA8MTL9 139 aa9.07□□□□□ -0.96
SNORD55-201ENST00000581525 ATP6V0CP27449 155 aa9.07□□□□□ -0.96
SNORD55-201ENST00000581525 TSPOP30536 169 aa9.07□□□□□ -0.96
SNORD55-201ENST00000581525 HIST1H1AQ02539 215 aaPredicted RBP9.07□□□□□ -0.96
SNORD55-201ENST00000581525 C9orf47Q6ZRZ4 202 aa9.07□□□□□ -0.96
SNORD55-201ENST00000581525 RPP25LQ8N5L8 163 aaKnown RBP9.07□□□□□ -0.96
SNORD55-201ENST00000581525 SUN5Q8TC36 379 aa9.07□□□□□ -0.96
SNORD55-201ENST00000581525 FAM19A4Q96LR4 140 aa9.07□□□□□ -0.96
SNORD55-201ENST00000581525 GOLT1BQ9Y3E0 138 aa9.07□□□□□ -0.96
SNORD55-201ENST00000581525 ALMS1Q8TCU4 4167 aa9.06□□□□□ -0.96
SNORD55-201ENST00000581525 VPS13DQ5THJ4 4388 aa9.06□□□□□ -0.96
SNORD55-201ENST00000581525 FXYD6-FXYD2A0A087WZ82 144 aa9.06□□□□□ -0.96
SNORD55-201ENST00000581525 M0R2Z0 102 aa9.06□□□□□ -0.96
SNORD55-201ENST00000581525 M0R3E3 92 aa9.06□□□□□ -0.96
SNORD55-201ENST00000581525 TAAR5O14804 337 aa9.06□□□□□ -0.96
SNORD55-201ENST00000581525 DEFB4AO15263 64 aa9.06□□□□□ -0.96
SNORD55-201ENST00000581525 CT45A10P0DMU9 189 aa9.06□□□□□ -0.96
SNORD55-201ENST00000581525 CDKN1BP46527 198 aa9.06□□□□□ -0.96
SNORD55-201ENST00000581525 TAS2R45P59539 299 aa9.06□□□□□ -0.96
SNORD55-201ENST00000581525 SPINK13Q1W4C9 94 aa9.06□□□□□ -0.96
SNORD55-201ENST00000581525 PQLC2Q6ZP29 291 aa9.06□□□□□ -0.96
SNORD55-201ENST00000581525 TMEM256Q8N2U0 113 aa9.06□□□□□ -0.96
SNORD55-201ENST00000581525 OR10J6PQ8NGY7 276 aa9.06□□□□□ -0.96
SNORD55-201ENST00000581525 PHLDA1Q8WV24 401 aaPredicted RBP9.06□□□□□ -0.96
SNORD55-201ENST00000581525 LINC00477Q96M19 166 aa9.06□□□□□ -0.96
SNORD55-201ENST00000581525 CYTL1Q9NRR1 136 aa9.06□□□□□ -0.96
SNORD55-201ENST00000581525 PPP1R14DQ9NXH3 145 aa9.06□□□□□ -0.96
SNORD55-201ENST00000581525 LCE6AA0A183 80 aa9.05□□□□□ -0.96
SNORD55-201ENST00000581525 MBP02144 154 aa9.05□□□□□ -0.96
SNORD55-201ENST00000581525 SLC25A5P05141 298 aaKnown RBP9.05□□□□□ -0.96
SNORD55-201ENST00000581525 NMBP08949 121 aa9.05□□□□□ -0.96
SNORD55-201ENST00000581525 STAG3L2P0CL84 134 aa9.05□□□□□ -0.96
SNORD55-201ENST00000581525 STAG3L3P0CL85 134 aa9.05□□□□□ -0.96
SNORD55-201ENST00000581525 NANOS2P60321 138 aaKnown RBP9.05□□□□□ -0.96
SNORD55-201ENST00000581525 ZNF345Q14585 488 aa9.05□□□□□ -0.96
SNORD55-201ENST00000581525 KHDC3LQ587J8 217 aa9.05□□□□□ -0.96
SNORD55-201ENST00000581525 RPL7L1Q6DKI1 246 aaKnown RBP9.05□□□□□ -0.96
SNORD55-201ENST00000581525 OR10G4Q8NGN3 311 aa9.05□□□□□ -0.96
SNORD55-201ENST00000581525 OR10G9Q8NGN4 311 aa9.05□□□□□ -0.96
SNORD55-201ENST00000581525 OR10G7Q8NGN6 311 aa9.05□□□□□ -0.96
SNORD55-201ENST00000581525 BLNKQ8WV28 456 aa9.05□□□□□ -0.96
SNORD55-201ENST00000581525 GNPNAT1Q96EK6 184 aaPredicted RBP9.05□□□□□ -0.96
SNORD55-201ENST00000581525 AAMDCQ9H7C9 122 aa9.05□□□□□ -0.96
SNORD55-201ENST00000581525 TRBV7-9A0A0J9YWB2 115 aa9.04□□□□□ -0.96
SNORD55-201ENST00000581525 RBAKDNA6NC62 111 aa9.04□□□□□ -0.96
SNORD55-201ENST00000581525 CXorf65A6NEN9 183 aa9.04□□□□□ -0.96
SNORD55-201ENST00000581525 C11orf94C9JXX5 98 aa9.04□□□□□ -0.96
SNORD55-201ENST00000581525 OR7C2O60412 319 aa9.04□□□□□ -0.96
SNORD55-201ENST00000581525 JTBO76095 146 aa9.04□□□□□ -0.96
SNORD55-201ENST00000581525 INSP01308 110 aa9.04□□□□□ -0.96
SNORD55-201ENST00000581525 HBE1P02100 147 aa9.04□□□□□ -0.96
SNORD55-201ENST00000581525 OR10J4P0C629 311 aa9.04□□□□□ -0.96
SNORD55-201ENST00000581525 CRISP2P16562 243 aa9.04□□□□□ -0.96
SNORD55-201ENST00000581525 RAB2AP61019 212 aa9.04□□□□□ -0.96
SNORD55-201ENST00000581525 ICAM4Q14773 271 aa9.04□□□□□ -0.96
SNORD55-201ENST00000581525 C12orf74Q32Q52 190 aa9.04□□□□□ -0.96
SNORD55-201ENST00000581525 Q6ZNX1 250 aa9.04□□□□□ -0.96
SNORD55-201ENST00000581525 EXOC3-AS1Q8N2X6 119 aa9.04□□□□□ -0.96
SNORD55-201ENST00000581525 KCNRGQ8N5I3 272 aa9.04□□□□□ -0.96
SNORD55-201ENST00000581525 HSD17B11Q8NBQ5 300 aa9.04□□□□□ -0.96
SNORD55-201ENST00000581525 OR11H4Q8NGC9 324 aa9.04□□□□□ -0.96
SNORD55-201ENST00000581525 PHYHIPLQ96FC7 376 aa9.04□□□□□ -0.96
SNORD55-201ENST00000581525 AGPAT4-IT1Q9H0P7 198 aa9.04□□□□□ -0.96
SNORD55-201ENST00000581525 CELA1Q9UNI1 258 aa9.04□□□□□ -0.96
SNORD55-201ENST00000581525 BORCS7-ASMTA0A0B4J1R7 106 aa9.03□□□□□ -0.96
SNORD55-201ENST00000581525 TEX48A0A1B0GUV7 120 aa9.03□□□□□ -0.96
SNORD55-201ENST00000581525 A0A1W2PPV4 95 aa9.03□□□□□ -0.96
SNORD55-201ENST00000581525 KLLNB2CW77 178 aa9.03□□□□□ -0.96
SNORD55-201ENST00000581525 TAS2R60P59551 318 aa9.03□□□□□ -0.96
SNORD55-201ENST00000581525 RRN3P1Q2M238 152 aa9.03□□□□□ -0.96
SNORD55-201ENST00000581525 BAP18Q8IXM2 172 aa9.03□□□□□ -0.96
SNORD55-201ENST00000581525 DKK2Q9UBU2 259 aa9.03□□□□□ -0.96
SNORD55-201ENST00000581525 KLK5Q9Y337 293 aaPredicted RBP9.03□□□□□ -0.96
SNORD55-201ENST00000581525 HYDINQ4G0P3 5121 aa9.03□□□□□ -0.96
SNORD55-201ENST00000581525 TRAV12-2A0A075B6T6 113 aa9.02□□□□□ -0.97
SNORD55-201ENST00000581525 LOC102723971A0A1B0GUV8 181 aa9.02□□□□□ -0.97
SNORD55-201ENST00000581525 PLAC8L1A1L4L8 177 aa9.02□□□□□ -0.97
SNORD55-201ENST00000581525 ZNF324O75467 553 aaPredicted RBP9.02□□□□□ -0.97
SNORD55-201ENST00000581525 SPART-AS1P0CW21 52 aa9.02□□□□□ -0.97
SNORD55-201ENST00000581525 LEPP41159 167 aa9.02□□□□□ -0.97
SNORD55-201ENST00000581525 TCTAP57738 103 aa9.02□□□□□ -0.97
SNORD55-201ENST00000581525 RANP62826 216 aaKnown RBP9.02□□□□□ -0.97
SNORD55-201ENST00000581525 PMS2P11Q13670 270 aa9.02□□□□□ -0.97
SNORD55-201ENST00000581525 KIR3DS1Q14943 382 aa9.02□□□□□ -0.97
SNORD55-201ENST00000581525 RAB24Q969Q5 203 aa9.02□□□□□ -0.97
SNORD55-201ENST00000581525 ST6GAL2Q96JF0 529 aa9.02□□□□□ -0.97
SNORD55-201ENST00000581525 LINC00467Q9BRT7 94 aa9.02□□□□□ -0.97
SNORD55-201ENST00000581525 SH3BGRL3Q9H299 93 aa9.02□□□□□ -0.97
SNORD55-201ENST00000581525 Q9H3A6 140 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms