RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 MORN5Q5VZ52 161 aa7.34□□□□□ -1.23
RFFL-209ENST00000581265 SPATA12Q7Z6I5 190 aa7.34□□□□□ -1.23
RFFL-209ENST00000581265 MITD1Q8WV92 249 aa7.34□□□□□ -1.23
RFFL-209ENST00000581265 ODF3Q96PU9 254 aa7.34□□□□□ -1.23
RFFL-209ENST00000581265 MGST2Q99735 147 aa7.34□□□□□ -1.23
RFFL-209ENST00000581265 PARD6GQ9BYG4 376 aaPredicted RBP7.34□□□□□ -1.23
RFFL-209ENST00000581265 KRTAP1-5Q9BYS1 174 aa7.34□□□□□ -1.23
RFFL-209ENST00000581265 DNAJC4Q9NNZ3 241 aa7.34□□□□□ -1.23
RFFL-209ENST00000581265 GSKIPQ9P0R6 139 aa7.34□□□□□ -1.23
RFFL-209ENST00000581265 RCL1Q9Y2P8 373 aaKnown RBP7.34□□□□□ -1.23
RFFL-209ENST00000581265 PXMP4Q9Y6I8 212 aa7.34□□□□□ -1.23
RFFL-209ENST00000581265 DMBT1Q9UGM3 2413 aaPredicted RBP7.34□□□□□ -1.23
RFFL-209ENST00000581265 A0A0J9YY99 117 aa7.33□□□□□ -1.24
RFFL-209ENST00000581265 GAGE12BA1L429 117 aa7.33□□□□□ -1.24
RFFL-209ENST00000581265 SNURFLB1AK76 121 aa7.33□□□□□ -1.24
RFFL-209ENST00000581265 SLC17A3O00476 420 aa7.33□□□□□ -1.24
RFFL-209ENST00000581265 GAGE7O76087 117 aa7.33□□□□□ -1.24
RFFL-209ENST00000581265 SCGB1D2O95969 90 aa7.33□□□□□ -1.24
RFFL-209ENST00000581265 MBPP02686 304 aaPredicted RBP7.33□□□□□ -1.24
RFFL-209ENST00000581265 RLN2P04090 185 aa7.33□□□□□ -1.24
RFFL-209ENST00000581265 GAGE12FP0CL80 117 aa7.33□□□□□ -1.24
RFFL-209ENST00000581265 GAGE12GP0CL81 117 aa7.33□□□□□ -1.24
RFFL-209ENST00000581265 GAGE12IP0CL82 117 aa7.33□□□□□ -1.24
RFFL-209ENST00000581265 CT45A10P0DMU9 189 aa7.33□□□□□ -1.24
RFFL-209ENST00000581265 INPP1P49441 399 aa7.33□□□□□ -1.24
RFFL-209ENST00000581265 RAB31Q13636 194 aa7.33□□□□□ -1.24
RFFL-209ENST00000581265 OPCMLQ14982 345 aa7.33□□□□□ -1.24
RFFL-209ENST00000581265 GUK1Q16774 197 aa7.33□□□□□ -1.24
RFFL-209ENST00000581265 C10orf113Q5VZT2 155 aa7.33□□□□□ -1.24
RFFL-209ENST00000581265 TRIQKQ629K1 86 aa7.33□□□□□ -1.24
RFFL-209ENST00000581265 ZNF431Q8TF32 576 aaPredicted RBP7.33□□□□□ -1.24
RFFL-209ENST00000581265 PYGO2Q9BRQ0 406 aa7.33□□□□□ -1.24
RFFL-209ENST00000581265 TRAV12-3A0A0B4J271 114 aa7.32□□□□□ -1.24
RFFL-209ENST00000581265 CCDC160A6NGH7 325 aa7.32□□□□□ -1.24
RFFL-209ENST00000581265 CENPXA8MT69 81 aa7.32□□□□□ -1.24
RFFL-209ENST00000581265 NPIPB6E9PJ23 425 aa7.32□□□□□ -1.24
RFFL-209ENST00000581265 H3BTX0 84 aa7.32□□□□□ -1.24
RFFL-209ENST00000581265 BTCP35070 178 aa7.32□□□□□ -1.24
RFFL-209ENST00000581265 LEPP41159 167 aa7.32□□□□□ -1.24
RFFL-209ENST00000581265 CAMLGP49069 296 aa7.32□□□□□ -1.24
RFFL-209ENST00000581265 CNPY1Q3B7I2 92 aa7.32□□□□□ -1.24
RFFL-209ENST00000581265 Q6ZRG5 221 aa7.32□□□□□ -1.24
RFFL-209ENST00000581265 C18orf15Q96N68 181 aa7.32□□□□□ -1.24
RFFL-209ENST00000581265 MRPS16Q9Y3D3 137 aaKnown RBP7.32□□□□□ -1.24
RFFL-209ENST00000581265 LINC00854A0A1B0GVQ3 168 aa7.31□□□□□ -1.24
RFFL-209ENST00000581265 ZNF253O75346 499 aa7.31□□□□□ -1.24
RFFL-209ENST00000581265 SLC25A5P05141 298 aaKnown RBP7.31□□□□□ -1.24
RFFL-209ENST00000581265 KRTAP10-2P60368 255 aa7.31□□□□□ -1.24
RFFL-209ENST00000581265 Q6ZTI0 123 aa7.31□□□□□ -1.24
RFFL-209ENST00000581265 NRARPQ7Z6K4 114 aa7.31□□□□□ -1.24
RFFL-209ENST00000581265 VSIG2Q96IQ7 327 aa7.31□□□□□ -1.24
RFFL-209ENST00000581265 SDHCQ99643 169 aaPredicted RBP7.31□□□□□ -1.24
RFFL-209ENST00000581265 RBM38Q9H0Z9 239 aaKnown RBP7.31□□□□□ -1.24
RFFL-209ENST00000581265 ZNF586Q9NXT0 402 aa7.31□□□□□ -1.24
RFFL-209ENST00000581265 TRAV5A0A0B4J249 113 aa7.3□□□□□ -1.24
RFFL-209ENST00000581265 RPL29P47914 159 aaKnown RBP7.3□□□□□ -1.24
RFFL-209ENST00000581265 MIC13Q5XKP0 118 aa7.3□□□□□ -1.24
RFFL-209ENST00000581265 OR1L4Q8NGR5 311 aa7.3□□□□□ -1.24
RFFL-209ENST00000581265 CHAC2Q8WUX2 184 aa7.3□□□□□ -1.24
RFFL-209ENST00000581265 MRPL53Q96EL3 112 aaKnown RBP7.3□□□□□ -1.24
RFFL-209ENST00000581265 LINC00467Q9BRT7 94 aa7.3□□□□□ -1.24
RFFL-209ENST00000581265 TMPRSS5Q9H3S3 457 aa7.3□□□□□ -1.24
RFFL-209ENST00000581265 C11orf1Q9H5F2 150 aa7.3□□□□□ -1.24
RFFL-209ENST00000581265 WDR83OSQ9Y284 106 aa7.3□□□□□ -1.24
RFFL-209ENST00000581265 TRBV19A0A075B6N1 114 aa7.29□□□□□ -1.24
RFFL-209ENST00000581265 A0A096LPF7 62 aa7.29□□□□□ -1.24
RFFL-209ENST00000581265 KLLNB2CW77 178 aa7.29□□□□□ -1.24
RFFL-209ENST00000581265 J3KRW8 73 aa7.29□□□□□ -1.24
RFFL-209ENST00000581265 J3QL48 77 aa7.29□□□□□ -1.24
RFFL-209ENST00000581265 L7N2F9 121 aa7.29□□□□□ -1.24
RFFL-209ENST00000581265 ZNF324O75467 553 aaPredicted RBP7.29□□□□□ -1.24
RFFL-209ENST00000581265 CST7O76096 145 aa7.29□□□□□ -1.24
RFFL-209ENST00000581265 VAMP2P63027 116 aa7.29□□□□□ -1.24
RFFL-209ENST00000581265 ZNF846Q147U1 533 aa7.29□□□□□ -1.24
RFFL-209ENST00000581265 VWC2Q2TAL6 325 aa7.29□□□□□ -1.24
RFFL-209ENST00000581265 ANXA2RQ3ZCQ2 193 aa7.29□□□□□ -1.24
RFFL-209ENST00000581265 C12orf45Q8N5I9 185 aaPredicted RBP7.29□□□□□ -1.24
RFFL-209ENST00000581265 C11orf72Q8NBR9 251 aa7.29□□□□□ -1.24
RFFL-209ENST00000581265 ZNF680Q8NEM1 530 aa7.29□□□□□ -1.24
RFFL-209ENST00000581265 FAM19A4Q96LR4 140 aa7.29□□□□□ -1.24
RFFL-209ENST00000581265 LINC00477Q96M19 166 aa7.29□□□□□ -1.24
RFFL-209ENST00000581265 PFDN5Q99471 154 aa7.29□□□□□ -1.24
RFFL-209ENST00000581265 GSN-AS1Q9NRJ2 163 aa7.29□□□□□ -1.24
RFFL-209ENST00000581265 UQCC1Q9NVA1 299 aa7.29□□□□□ -1.24
RFFL-209ENST00000581265 TMEM14CQ9P0S9 112 aa7.29□□□□□ -1.24
RFFL-209ENST00000581265 DNAH5Q8TE73 4624 aa7.29□□□□□ -1.24
RFFL-209ENST00000581265 TRGV2A0A075B6R0 118 aa7.28□□□□□ -1.24
RFFL-209ENST00000581265 C7orf71A4D174 169 aa7.28□□□□□ -1.24
RFFL-209ENST00000581265 FAM24AA6NFZ4 105 aa7.28□□□□□ -1.24
RFFL-209ENST00000581265 M0R3E3 92 aa7.28□□□□□ -1.24
RFFL-209ENST00000581265 NDUFB4O95168 129 aa7.28□□□□□ -1.24
RFFL-209ENST00000581265 NMBP08949 121 aa7.28□□□□□ -1.24
RFFL-209ENST00000581265 IL7P13232 177 aa7.28□□□□□ -1.24
RFFL-209ENST00000581265 BCAP31P51572 246 aa7.28□□□□□ -1.24
RFFL-209ENST00000581265 CAV2P51636 162 aa7.28□□□□□ -1.24
RFFL-209ENST00000581265 Q6ZRN7 208 aaPredicted RBP7.28□□□□□ -1.24
RFFL-209ENST00000581265 AGPAT4-IT1Q9H0P7 198 aa7.28□□□□□ -1.24
RFFL-209ENST00000581265 C20orf85Q9H1P6 137 aa7.28□□□□□ -1.24
RFFL-209ENST00000581265 SLC39A9Q9NUM3 307 aa7.28□□□□□ -1.24
RFFL-209ENST00000581265 FUT9Q9Y231 359 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms