RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 SMAD5-AS1Q9Y6J3 95 aa11.59□□□□□ -0.55
SS18-216ENST00000580751 CST9LP1Q5W188 147 aa11.58□□□□□ -0.56
SS18-216ENST00000580751 RXFP4Q8TDU9 374 aa11.58□□□□□ -0.56
SS18-216ENST00000580751 HIST1H2BAQ96A08 127 aa11.58□□□□□ -0.56
SS18-216ENST00000580751 MRPL53Q96EL3 112 aaKnown RBP11.58□□□□□ -0.56
SS18-216ENST00000580751 FAM110AQ9BQ89 295 aa11.58□□□□□ -0.56
SS18-216ENST00000580751 SLC35B3Q9H1N7 401 aa11.58□□□□□ -0.56
SS18-216ENST00000580751 YTHDF2Q9Y5A9 579 aaKnown RBP11.58□□□□□ -0.56
SS18-216ENST00000580751 SERTM2A0A1B0GWG4 89 aa11.57□□□□□ -0.56
SS18-216ENST00000580751 K7EQG2 157 aa11.57□□□□□ -0.56
SS18-216ENST00000580751 NDUFB4O95168 129 aa11.57□□□□□ -0.56
SS18-216ENST00000580751 WFDC3Q8IUB2 231 aa11.57□□□□□ -0.56
SS18-216ENST00000580751 C5orf17Q8NAS9 161 aa11.57□□□□□ -0.56
SS18-216ENST00000580751 DCANP1Q8TF63 244 aa11.57□□□□□ -0.56
SS18-216ENST00000580751 BLNKQ8WV28 456 aa11.57□□□□□ -0.56
SS18-216ENST00000580751 C11orf52Q96A22 123 aa11.57□□□□□ -0.56
SS18-216ENST00000580751 RARRES2Q99969 163 aa11.57□□□□□ -0.56
SS18-216ENST00000580751 TREM1Q9NP99 234 aa11.57□□□□□ -0.56
SS18-216ENST00000580751 OR11H12B2RN74 326 aa11.56□□□□□ -0.56
SS18-216ENST00000580751 GGTLC3B5MD39 225 aa11.56□□□□□ -0.56
SS18-216ENST00000580751 KRBOX1C9JBD0 128 aa11.56□□□□□ -0.56
SS18-216ENST00000580751 UBE2G2P60604 165 aa11.56□□□□□ -0.56
SS18-216ENST00000580751 RANP62826 216 aaKnown RBP11.56□□□□□ -0.56
SS18-216ENST00000580751 SUMO1P63165 101 aaKnown RBP11.56□□□□□ -0.56
SS18-216ENST00000580751 ODF3L2Q3SX64 289 aa11.56□□□□□ -0.56
SS18-216ENST00000580751 DEFB121Q5J5C9 76 aa11.56□□□□□ -0.56
SS18-216ENST00000580751 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.56□□□□□ -0.56
SS18-216ENST00000580751 SLC7A5P1Q8MH63 180 aa11.56□□□□□ -0.56
SS18-216ENST00000580751 Q9H3A6 140 aa11.56□□□□□ -0.56
SS18-216ENST00000580751 ZNF331Q9NQX6 463 aaPredicted RBP11.56□□□□□ -0.56
SS18-216ENST00000580751 TMEM218A2RU14 115 aa11.55□□□□□ -0.56
SS18-216ENST00000580751 FBLL1A6NHQ2 334 aaKnown RBP11.55□□□□□ -0.56
SS18-216ENST00000580751 A8MZ25 164 aa11.55□□□□□ -0.56
SS18-216ENST00000580751 ISLRO14498 428 aa11.55□□□□□ -0.56
SS18-216ENST00000580751 S100A9P06702 114 aaKnown RBP11.55□□□□□ -0.56
SS18-216ENST00000580751 SRP19P09132 144 aaKnown RBP11.55□□□□□ -0.56
SS18-216ENST00000580751 IGHV4-30-4P0DP06 118 aa11.55□□□□□ -0.56
SS18-216ENST00000580751 SNRPD3P62318 126 aaKnown RBP11.55□□□□□ -0.56
SS18-216ENST00000580751 FAM74A3Q4VXF1 159 aa11.55□□□□□ -0.56
SS18-216ENST00000580751 CMTM2Q8TAZ6 248 aa11.55□□□□□ -0.56
SS18-216ENST00000580751 MAP6D1Q9H9H5 199 aa11.55□□□□□ -0.56
SS18-216ENST00000580751 C19orf73Q9NVV2 129 aa11.55□□□□□ -0.56
SS18-216ENST00000580751 PGPA6NDG6 321 aa11.54□□□□□ -0.56
SS18-216ENST00000580751 ID1P41134 155 aa11.54□□□□□ -0.56
SS18-216ENST00000580751 CSN1S1P47710 185 aa11.54□□□□□ -0.56
SS18-216ENST00000580751 ATP5G3P48201 142 aa11.54□□□□□ -0.56
SS18-216ENST00000580751 SRSF3P84103 164 aaKnown RBP11.54□□□□□ -0.56
SS18-216ENST00000580751 C17orf77Q96MU5 243 aa11.54□□□□□ -0.56
SS18-216ENST00000580751 CITED4Q96RK1 184 aa11.54□□□□□ -0.56
SS18-216ENST00000580751 WFDC10AQ9H1F0 79 aa11.54□□□□□ -0.56
SS18-216ENST00000580751 TUBA4BQ9H853 241 aa11.54□□□□□ -0.56
SS18-216ENST00000580751 EPDR1Q9UM22 224 aa11.54□□□□□ -0.56
SS18-216ENST00000580751 PRKDCP78527 4128 aaKnown RBP11.53□□□□□ -0.56
SS18-216ENST00000580751 SOCS3O14543 225 aa11.53□□□□□ -0.56
SS18-216ENST00000580751 ZNF688P0C7X2 276 aa11.53□□□□□ -0.56
SS18-216ENST00000580751 FAM24BQ8N5W8 94 aa11.53□□□□□ -0.56
SS18-216ENST00000580751 DEFB125Q8N687 156 aa11.53□□□□□ -0.56
SS18-216ENST00000580751 ATG101Q9BSB4 218 aa11.53□□□□□ -0.56
SS18-216ENST00000580751 SEC11CQ9BY50 192 aa11.53□□□□□ -0.56
SS18-216ENST00000580751 SRD5A3Q9H8P0 318 aa11.53□□□□□ -0.56
SS18-216ENST00000580751 C9JQL5 133 aa11.52□□□□□ -0.57
SS18-216ENST00000580751 K7EQM0 130 aa11.52□□□□□ -0.57
SS18-216ENST00000580751 SLC25A5P05141 298 aaKnown RBP11.52□□□□□ -0.57
SS18-216ENST00000580751 SFTA3P0C7M3 94 aa11.52□□□□□ -0.57
SS18-216ENST00000580751 S100A1P23297 94 aa11.52□□□□□ -0.57
SS18-216ENST00000580751 DEFB131AP59861 70 aa11.52□□□□□ -0.57
SS18-216ENST00000580751 SOHLH1Q5JUK2 328 aa11.52□□□□□ -0.57
SS18-216ENST00000580751 C16orf92Q96LL3 132 aa11.52□□□□□ -0.57
SS18-216ENST00000580751 SLC17A3O00476 420 aa11.51□□□□□ -0.57
SS18-216ENST00000580751 PEX7O00628 323 aa11.51□□□□□ -0.57
SS18-216ENST00000580751 TCRAP04437 139 aa11.51□□□□□ -0.57
SS18-216ENST00000580751 FRMD6-AS1P0C7T7 363 aa11.51□□□□□ -0.57
SS18-216ENST00000580751 PSMG4Q5JS54 123 aa11.51□□□□□ -0.57
SS18-216ENST00000580751 C10orf91Q5T1B1 145 aa11.51□□□□□ -0.57
SS18-216ENST00000580751 CYB561D1Q8N8Q1 229 aa11.51□□□□□ -0.57
SS18-216ENST00000580751 KLF12Q9Y4X4 402 aa11.51□□□□□ -0.57
SS18-216ENST00000580751 TRAV8-2A0A0B4J237 113 aa11.5□□□□□ -0.57
SS18-216ENST00000580751 TRBV6-1A0A0K0K1D8 114 aa11.5□□□□□ -0.57
SS18-216ENST00000580751 RBAKDNA6NC62 111 aa11.5□□□□□ -0.57
SS18-216ENST00000580751 CNN1P51911 297 aaKnown RBP11.5□□□□□ -0.57
SS18-216ENST00000580751 TAS2R60P59551 318 aa11.5□□□□□ -0.57
SS18-216ENST00000580751 PSG3Q16557 428 aa11.5□□□□□ -0.57
SS18-216ENST00000580751 APRG1Q8IVJ8 170 aa11.5□□□□□ -0.57
SS18-216ENST00000580751 EXOC3-AS1Q8N2X6 119 aa11.5□□□□□ -0.57
SS18-216ENST00000580751 C2CD4CQ8TF44 421 aa11.5□□□□□ -0.57
SS18-216ENST00000580751 SMIM12Q96EX1 92 aa11.5□□□□□ -0.57
SS18-216ENST00000580751 SCO2A0A1W2PP80 73 aa11.49□□□□□ -0.57
SS18-216ENST00000580751 DIRC3C9JPN6 131 aa11.49□□□□□ -0.57
SS18-216ENST00000580751 H3BTX0 84 aa11.49□□□□□ -0.57
SS18-216ENST00000580751 SNRPCP09234 159 aaKnown RBP11.49□□□□□ -0.57
SS18-216ENST00000580751 LINC00052Q96N35 136 aa11.49□□□□□ -0.57
SS18-216ENST00000580751 B9D2Q9BPU9 175 aa11.49□□□□□ -0.57
SS18-216ENST00000580751 CARHSP1Q9Y2V2 147 aaKnown RBP11.49□□□□□ -0.57
SS18-216ENST00000580751 LY96Q9Y6Y9 160 aa11.49□□□□□ -0.57
SS18-216ENST00000580751 C9JCJ5 164 aa11.48□□□□□ -0.57
SS18-216ENST00000580751 F8W036 122 aa11.48□□□□□ -0.57
SS18-216ENST00000580751 ATP6V1G1O75348 118 aa11.48□□□□□ -0.57
SS18-216ENST00000580751 AKR1C3P42330 323 aa11.48□□□□□ -0.57
SS18-216ENST00000580751 TMEM183BQ1AE95 376 aa11.48□□□□□ -0.57
SS18-216ENST00000580751 TMEM75Q8N9X5 138 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms