RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 ZNF688P0C7X2 276 aa14.1□□□□□ -0.15
LIMD2-209ENST00000580222 LCN15Q6UWW0 184 aa14.1□□□□□ -0.15
LIMD2-209ENST00000580222 FAM24BQ8N5W8 94 aa14.1□□□□□ -0.15
LIMD2-209ENST00000580222 MAP6D1Q9H9H5 199 aa14.1□□□□□ -0.15
LIMD2-209ENST00000580222 UMAD1C9J7I0 102 aa14.09□□□□□ -0.15
LIMD2-209ENST00000580222 H3BTX0 84 aa14.09□□□□□ -0.15
LIMD2-209ENST00000580222 IGLC2P0DOY2 106 aa14.09□□□□□ -0.15
LIMD2-209ENST00000580222 ID1P41134 155 aa14.09□□□□□ -0.15
LIMD2-209ENST00000580222 SNRPD3P62318 126 aaKnown RBP14.09□□□□□ -0.15
LIMD2-209ENST00000580222 UBE2L3P68036 154 aaKnown RBP14.09□□□□□ -0.15
LIMD2-209ENST00000580222 ODF3L2Q3SX64 289 aa14.09□□□□□ -0.15
LIMD2-209ENST00000580222 C11orf45Q8TAV5 145 aa14.09□□□□□ -0.15
LIMD2-209ENST00000580222 C2CD4CQ8TF44 421 aa14.09□□□□□ -0.15
LIMD2-209ENST00000580222 RAB24Q969Q5 203 aa14.09□□□□□ -0.15
LIMD2-209ENST00000580222 LRP1BQ9NZR2 4599 aa14.09□□□□□ -0.15
LIMD2-209ENST00000580222 KIR2DL5BA0A0G2JN68 375 aa14.08□□□□□ -0.16
LIMD2-209ENST00000580222 KIR2DL5BA0A0G2JPC4 375 aa14.08□□□□□ -0.16
LIMD2-209ENST00000580222 CTXND1A0A1B0GTU2 59 aa14.08□□□□□ -0.16
LIMD2-209ENST00000580222 PRSS29PA6NIE9 313 aa14.08□□□□□ -0.16
LIMD2-209ENST00000580222 SOCS3O14543 225 aa14.08□□□□□ -0.16
LIMD2-209ENST00000580222 OR10J4P0C629 311 aa14.08□□□□□ -0.16
LIMD2-209ENST00000580222 HIST1H1EP10412 219 aaKnown RBP14.08□□□□□ -0.16
LIMD2-209ENST00000580222 PSMB3P49720 205 aa14.08□□□□□ -0.16
LIMD2-209ENST00000580222 CMC4P56277 68 aaPredicted RBP14.08□□□□□ -0.16
LIMD2-209ENST00000580222 GUK1Q16774 197 aa14.08□□□□□ -0.16
LIMD2-209ENST00000580222 PQLC2Q6ZP29 291 aa14.08□□□□□ -0.16
LIMD2-209ENST00000580222 KIR2DL5AQ8N109 375 aa14.08□□□□□ -0.16
LIMD2-209ENST00000580222 KIR2DL5BQ8NHK3 375 aa14.08□□□□□ -0.16
LIMD2-209ENST00000580222 RNF141Q8WVD5 230 aa14.08□□□□□ -0.16
LIMD2-209ENST00000580222 C17orf77Q96MU5 243 aa14.08□□□□□ -0.16
LIMD2-209ENST00000580222 HRH4Q9H3N8 390 aa14.08□□□□□ -0.16
LIMD2-209ENST00000580222 IGLL5B9A064 214 aa14.07□□□□□ -0.16
LIMD2-209ENST00000580222 H3BQ15 152 aa14.07□□□□□ -0.16
LIMD2-209ENST00000580222 ISLRO14498 428 aa14.07□□□□□ -0.16
LIMD2-209ENST00000580222 STAG3L2P0CL84 134 aa14.07□□□□□ -0.16
LIMD2-209ENST00000580222 STAG3L3P0CL85 134 aa14.07□□□□□ -0.16
LIMD2-209ENST00000580222 ARL14EPLP0DKL9 152 aa14.07□□□□□ -0.16
LIMD2-209ENST00000580222 DEFB131AP59861 70 aa14.07□□□□□ -0.16
LIMD2-209ENST00000580222 ZNF726P1Q15940 193 aa14.07□□□□□ -0.16
LIMD2-209ENST00000580222 PSMG4Q5JS54 123 aa14.07□□□□□ -0.16
LIMD2-209ENST00000580222 SSX7Q7RTT5 188 aa14.07□□□□□ -0.16
LIMD2-209ENST00000580222 ZNF575Q86XF7 245 aa14.07□□□□□ -0.16
LIMD2-209ENST00000580222 FAM213BQ8TBF2 198 aa14.07□□□□□ -0.16
LIMD2-209ENST00000580222 BLNKQ8WV28 456 aa14.07□□□□□ -0.16
LIMD2-209ENST00000580222 ZNF503Q96F45 646 aa14.07□□□□□ -0.16
LIMD2-209ENST00000580222 SLC50A1Q9BRV3 221 aa14.07□□□□□ -0.16
LIMD2-209ENST00000580222 ZNF586Q9NXT0 402 aa14.07□□□□□ -0.16
LIMD2-209ENST00000580222 PLA2G2EQ9NZK7 142 aa14.07□□□□□ -0.16
LIMD2-209ENST00000580222 SLC17A3O00476 420 aa14.06□□□□□ -0.16
LIMD2-209ENST00000580222 DEFB4AO15263 64 aa14.06□□□□□ -0.16
LIMD2-209ENST00000580222 LINC00052Q96N35 136 aa14.06□□□□□ -0.16
LIMD2-209ENST00000580222 TRBV19A0A075B6N1 114 aa14.05□□□□□ -0.16
LIMD2-209ENST00000580222 NBEAP1P0C6P0 100 aa14.05□□□□□ -0.16
LIMD2-209ENST00000580222 FHITP49789 147 aa14.05□□□□□ -0.16
LIMD2-209ENST00000580222 IGFL4Q6B9Z1 124 aa14.05□□□□□ -0.16
LIMD2-209ENST00000580222 DPPA3Q6W0C5 159 aa14.05□□□□□ -0.16
LIMD2-209ENST00000580222 IQCF2Q8IXL9 164 aa14.05□□□□□ -0.16
LIMD2-209ENST00000580222 FXYD5Q96DB9 178 aa14.05□□□□□ -0.16
LIMD2-209ENST00000580222 PHYHIPLQ96FC7 376 aa14.05□□□□□ -0.16
LIMD2-209ENST00000580222 TRAV8-2A0A0B4J237 113 aa14.04□□□□□ -0.16
LIMD2-209ENST00000580222 MAP1LC3B2A6NCE7 125 aa14.04□□□□□ -0.16
LIMD2-209ENST00000580222 CXorf1O96002 111 aa14.04□□□□□ -0.16
LIMD2-209ENST00000580222 RAB5CP51148 216 aa14.04□□□□□ -0.16
LIMD2-209ENST00000580222 PDE6HQ13956 83 aa14.04□□□□□ -0.16
LIMD2-209ENST00000580222 ALKAL2Q6UX46 152 aa14.04□□□□□ -0.16
LIMD2-209ENST00000580222 APRG1Q8IVJ8 170 aa14.04□□□□□ -0.16
LIMD2-209ENST00000580222 RNF182Q8N6D2 247 aa14.04□□□□□ -0.16
LIMD2-209ENST00000580222 SAT2Q96F10 170 aaPredicted RBP14.04□□□□□ -0.16
LIMD2-209ENST00000580222 MAP1LC3BQ9GZQ8 125 aa14.04□□□□□ -0.16
LIMD2-209ENST00000580222 ZNF331Q9NQX6 463 aaPredicted RBP14.04□□□□□ -0.16
LIMD2-209ENST00000580222 ZNF253O75346 499 aa14.03□□□□□ -0.16
LIMD2-209ENST00000580222 GCHFRP30047 84 aa14.03□□□□□ -0.16
LIMD2-209ENST00000580222 SULT1A2P50226 295 aa14.03□□□□□ -0.16
LIMD2-209ENST00000580222 FGF8P55075 233 aaPredicted RBP14.03□□□□□ -0.16
LIMD2-209ENST00000580222 TCTAP57738 103 aa14.03□□□□□ -0.16
LIMD2-209ENST00000580222 ZNF124Q15973 351 aa14.03□□□□□ -0.16
LIMD2-209ENST00000580222 FAM74A1Q5RGS3 127 aa14.03□□□□□ -0.16
LIMD2-209ENST00000580222 RARRES2Q99969 163 aa14.03□□□□□ -0.16
LIMD2-209ENST00000580222 APOBP04114 4563 aaKnown RBP14.03□□□□□ -0.16
LIMD2-209ENST00000580222 HLA-DMBP28068 263 aa14.02□□□□□ -0.17
LIMD2-209ENST00000580222 PSG9Q00887 426 aa14.02□□□□□ -0.17
LIMD2-209ENST00000580222 ZNF738Q8NE65 137 aa14.02□□□□□ -0.17
LIMD2-209ENST00000580222 C20orf173Q96LM9 149 aa14.02□□□□□ -0.17
LIMD2-209ENST00000580222 AAMDCQ9H7C9 122 aa14.02□□□□□ -0.17
LIMD2-209ENST00000580222 TMEM167BQ9NRX6 74 aa14.02□□□□□ -0.17
LIMD2-209ENST00000580222 NDUFB4O95168 129 aa14.01□□□□□ -0.17
LIMD2-209ENST00000580222 PSG3Q16557 428 aa14.01□□□□□ -0.17
LIMD2-209ENST00000580222 C11orf68Q9H3H3 251 aaKnown RBP14.01□□□□□ -0.17
LIMD2-209ENST00000580222 CLEC5AQ9NY25 188 aa14.01□□□□□ -0.17
LIMD2-209ENST00000580222 A0A1B0GV50 99 aa14□□□□□ -0.17
LIMD2-209ENST00000580222 M0R2N4 97 aa14□□□□□ -0.17
LIMD2-209ENST00000580222 H2AFB1P0C5Y9 115 aa14□□□□□ -0.17
LIMD2-209ENST00000580222 OR11H2Q8NH07 326 aa14□□□□□ -0.17
LIMD2-209ENST00000580222 SFT2D1Q8WV19 159 aa14□□□□□ -0.17
LIMD2-209ENST00000580222 KNCNA6PVL3 124 aa13.99□□□□□ -0.17
LIMD2-209ENST00000580222 RANP62826 216 aaKnown RBP13.99□□□□□ -0.17
LIMD2-209ENST00000580222 ACTL10Q5JWF8 245 aa13.99□□□□□ -0.17
LIMD2-209ENST00000580222 EXOC3-AS1Q8N2X6 119 aa13.99□□□□□ -0.17
LIMD2-209ENST00000580222 MBD3L1Q8WWY6 194 aa13.99□□□□□ -0.17
LIMD2-209ENST00000580222 Q9H3A6 140 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms