RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 IGHV3-74A0A0B4J1X5 117 aa8.23□□□□□ -1.09
TOP3A-209ENST00000580095 CHEK1O14757 476 aa8.23□□□□□ -1.09
TOP3A-209ENST00000580095 HLA-DMBP28068 263 aa8.23□□□□□ -1.09
TOP3A-209ENST00000580095 CRIP1P50238 77 aa8.23□□□□□ -1.09
TOP3A-209ENST00000580095 FAM120AOSQ5T036 256 aa8.23□□□□□ -1.09
TOP3A-209ENST00000580095 SIGLEC15Q6ZMC9 328 aa8.23□□□□□ -1.09
TOP3A-209ENST00000580095 Q6ZN92 141 aa8.23□□□□□ -1.09
TOP3A-209ENST00000580095 RBPMS2Q6ZRY4 209 aaKnown RBP8.23□□□□□ -1.09
TOP3A-209ENST00000580095 PMCHL2Q9BQD1 86 aa8.23□□□□□ -1.09
TOP3A-209ENST00000580095 IGKV2-40A0A087WW87 121 aaPredicted RBP8.23□□□□□ -1.09
TOP3A-209ENST00000580095 IGHV3-66A0A0C4DH42 116 aa8.23□□□□□ -1.09
TOP3A-209ENST00000580095 IGKV2D-40P01614 121 aaPredicted RBP8.23□□□□□ -1.09
TOP3A-209ENST00000580095 OR11H6Q8NGC7 330 aa8.23□□□□□ -1.09
TOP3A-209ENST00000580095 ATP6V0BQ99437 205 aa8.23□□□□□ -1.09
TOP3A-209ENST00000580095 H3BRN7 92 aa8.22□□□□□ -1.09
TOP3A-209ENST00000580095 IGLC2P0DOY2 106 aa8.22□□□□□ -1.09
TOP3A-209ENST00000580095 OR4B1Q8NGF8 309 aa8.22□□□□□ -1.09
TOP3A-209ENST00000580095 Q8TAT8 98 aa8.22□□□□□ -1.09
TOP3A-209ENST00000580095 ARPC1AQ92747 370 aa8.22□□□□□ -1.09
TOP3A-209ENST00000580095 CHRDL1Q9BU40 450 aa8.22□□□□□ -1.09
TOP3A-209ENST00000580095 PKD1L2Q7Z442 2459 aa8.22□□□□□ -1.09
TOP3A-209ENST00000580095 F8W735 103 aaPredicted RBP8.22□□□□□ -1.09
TOP3A-209ENST00000580095 PRTN3P24158 256 aa8.22□□□□□ -1.09
TOP3A-209ENST00000580095 HNRNPA3P51991 378 aaKnown RBP8.22□□□□□ -1.09
TOP3A-209ENST00000580095 OR1N2Q8NGR9 330 aa8.22□□□□□ -1.09
TOP3A-209ENST00000580095 PGPEP1Q9NXJ5 209 aa8.22□□□□□ -1.09
TOP3A-209ENST00000580095 PSG8Q9UQ74 426 aa8.22□□□□□ -1.09
TOP3A-209ENST00000580095 IGHV3OR16-10A0A075B7F0 116 aa8.21□□□□□ -1.09
TOP3A-209ENST00000580095 RAB9AP51151 201 aa8.21□□□□□ -1.09
TOP3A-209ENST00000580095 KLRB1Q12918 225 aa8.21□□□□□ -1.09
TOP3A-209ENST00000580095 FBXL19-AS1Q494R0 122 aa8.21□□□□□ -1.09
TOP3A-209ENST00000580095 RASL11AQ6T310 242 aa8.21□□□□□ -1.09
TOP3A-209ENST00000580095 ZNF414Q96IQ9 312 aa8.21□□□□□ -1.09
TOP3A-209ENST00000580095 UBTD1Q9HAC8 227 aa8.21□□□□□ -1.09
TOP3A-209ENST00000580095 IGHV3-49A0A0A0MS15 119 aa8.21□□□□□ -1.1
TOP3A-209ENST00000580095 C2orf70A6NJV1 201 aa8.21□□□□□ -1.1
TOP3A-209ENST00000580095 G3V4G9 280 aa8.21□□□□□ -1.1
TOP3A-209ENST00000580095 BRI3O95415 125 aa8.21□□□□□ -1.1
TOP3A-209ENST00000580095 IGLC3P0DOY3 106 aa8.21□□□□□ -1.1
TOP3A-209ENST00000580095 PAX2Q02962 417 aa8.21□□□□□ -1.1
TOP3A-209ENST00000580095 TMEM14CQ9P0S9 112 aa8.21□□□□□ -1.1
TOP3A-209ENST00000580095 UQCR10Q9UDW1 63 aa8.21□□□□□ -1.1
TOP3A-209ENST00000580095 CACNA1AO00555 2505 aa8.21□□□□□ -1.1
TOP3A-209ENST00000580095 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.21□□□□□ -1.13e-7■■■■■ 34.9
TOP3A-209ENST00000580095 IGHV1-24A0A0C4DH33 117 aa8.2□□□□□ -1.1
TOP3A-209ENST00000580095 GAGE12BA1L429 117 aa8.2□□□□□ -1.1
TOP3A-209ENST00000580095 ODF3BA8MYP8 253 aa8.2□□□□□ -1.1
TOP3A-209ENST00000580095 FXYD7P58549 80 aa8.2□□□□□ -1.1
TOP3A-209ENST00000580095 KLF5Q13887 457 aaPredicted RBP8.2□□□□□ -1.1
TOP3A-209ENST00000580095 PSG3Q16557 428 aa8.2□□□□□ -1.1
TOP3A-209ENST00000580095 ECSCRQ19T08 205 aa8.2□□□□□ -1.1
TOP3A-209ENST00000580095 C11orf71Q6IPW1 123 aa8.2□□□□□ -1.1
TOP3A-209ENST00000580095 ATP5L2Q7Z4Y8 100 aa8.2□□□□□ -1.1
TOP3A-209ENST00000580095 TMUB1Q9BVT8 246 aa8.2□□□□□ -1.1
TOP3A-209ENST00000580095 C1RLQ9NZP8 487 aa8.2□□□□□ -1.1
TOP3A-209ENST00000580095 IGLV11-55A0A075B6I3 123 aa8.2□□□□□ -1.1
TOP3A-209ENST00000580095 LINC01548A6NM66 108 aa8.2□□□□□ -1.1
TOP3A-209ENST00000580095 NDUFA3O95167 84 aa8.2□□□□□ -1.1
TOP3A-209ENST00000580095 C21orf62Q9NYP8 219 aa8.2□□□□□ -1.1
TOP3A-209ENST00000580095 ZNF492Q9P255 531 aa8.2□□□□□ -1.1
TOP3A-209ENST00000580095 ZFYVE26Q68DK2 2539 aa8.2□□□□□ -1.1
TOP3A-209ENST00000580095 OVOL3O00110 214 aa8.19□□□□□ -1.1
TOP3A-209ENST00000580095 MRPS12O15235 138 aaKnown RBP8.19□□□□□ -1.1
TOP3A-209ENST00000580095 IGLL1P15814 213 aa8.19□□□□□ -1.1
TOP3A-209ENST00000580095 HOXB4P17483 251 aaPredicted RBP8.19□□□□□ -1.1
TOP3A-209ENST00000580095 MFAP4P55083 255 aa8.19□□□□□ -1.1
TOP3A-209ENST00000580095 NPBQ8NG41 125 aa8.19□□□□□ -1.1
TOP3A-209ENST00000580095 LOC389332A0A1B0GUA5 103 aa8.19□□□□□ -1.1
TOP3A-209ENST00000580095 hDV102S1A0JD36 115 aa8.19□□□□□ -1.1
TOP3A-209ENST00000580095 TMEM213A2RRL7 107 aa8.19□□□□□ -1.1
TOP3A-209ENST00000580095 APOHP02749 345 aaPredicted RBP8.19□□□□□ -1.1
TOP3A-209ENST00000580095 FAM106CPP0CH98 169 aa8.19□□□□□ -1.1
TOP3A-209ENST00000580095 SCGB1A1P11684 91 aa8.19□□□□□ -1.1
TOP3A-209ENST00000580095 TCTAP57738 103 aa8.19□□□□□ -1.1
TOP3A-209ENST00000580095 FAM106AQ4KMX7 169 aa8.19□□□□□ -1.1
TOP3A-209ENST00000580095 ZNF562Q6V9R5 426 aa8.19□□□□□ -1.1
TOP3A-209ENST00000580095 RNF5Q99942 180 aa8.19□□□□□ -1.1
TOP3A-209ENST00000580095 LINC00527Q9UJ94 153 aa8.19□□□□□ -1.1
TOP3A-209ENST00000580095 POLQO75417 2590 aa8.19□□□□□ -1.1
TOP3A-209ENST00000580095 NPIPB6E9PJ23 425 aa8.19□□□□□ -1.1
TOP3A-209ENST00000580095 G3V318 75 aa8.19□□□□□ -1.1
TOP3A-209ENST00000580095 ZNF207O43670 478 aaKnown RBP8.19□□□□□ -1.1
TOP3A-209ENST00000580095 EGR2P11161 476 aaPredicted RBP8.19□□□□□ -1.1
TOP3A-209ENST00000580095 GPR183P32249 361 aa8.19□□□□□ -1.1
TOP3A-209ENST00000580095 UQCRFS1P47985 274 aa8.19□□□□□ -1.1
TOP3A-209ENST00000580095 TMEM75Q8N9X5 138 aa8.19□□□□□ -1.1
TOP3A-209ENST00000580095 MYO18BQ8IUG5 2567 aa8.18□□□□□ -1.1
TOP3A-209ENST00000580095 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.18□□□□□ -1.1
TOP3A-209ENST00000580095 A0A1B0GUT8 65 aa8.18□□□□□ -1.1
TOP3A-209ENST00000580095 WI2-2373I1.2A0A1W2PRP0 233 aa8.18□□□□□ -1.1
TOP3A-209ENST00000580095 VGLL1Q99990 258 aa8.18□□□□□ -1.1
TOP3A-209ENST00000580095 IGHV7-81A0A0B4J1V7 117 aa8.18□□□□□ -1.1
TOP3A-209ENST00000580095 NPIPB5A8MRT5 1133 aa8.18□□□□□ -1.1
TOP3A-209ENST00000580095 M0R1W7 72 aa8.18□□□□□ -1.1
TOP3A-209ENST00000580095 CTSGP08311 255 aa8.18□□□□□ -1.1
TOP3A-209ENST00000580095 CT83Q5H943 113 aa8.18□□□□□ -1.1
TOP3A-209ENST00000580095 RNF182Q8N6D2 247 aa8.18□□□□□ -1.1
TOP3A-209ENST00000580095 PIEZO1Q92508 2521 aa8.18□□□□□ -1.1
TOP3A-209ENST00000580095 USP9YO00507 2555 aaPredicted RBP8.17□□□□□ -1.1
TOP3A-209ENST00000580095 LEPROTL1O95214 131 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms