RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 SH3BGRL3Q9H299 93 aa9.57□□□□□ -0.88
TRAF4-214ENST00000580073 SAV1Q9H4B6 383 aaPredicted RBP9.57□□□□□ -0.88
TRAF4-214ENST00000580073 IGHV3OR16-12A0A075B7B8 117 aa9.56□□□□□ -0.88
TRAF4-214ENST00000580073 H3BQ15 152 aa9.56□□□□□ -0.88
TRAF4-214ENST00000580073 H3BTX0 84 aa9.56□□□□□ -0.88
TRAF4-214ENST00000580073 HBE1P02100 147 aa9.56□□□□□ -0.88
TRAF4-214ENST00000580073 PRB4P10163 310 aaPredicted RBP9.56□□□□□ -0.88
TRAF4-214ENST00000580073 ATP6V0CP27449 155 aa9.56□□□□□ -0.88
TRAF4-214ENST00000580073 EMP1P54849 157 aa9.56□□□□□ -0.88
TRAF4-214ENST00000580073 FFAR4Q5NUL3 377 aa9.56□□□□□ -0.88
TRAF4-214ENST00000580073 MIR17HGQ75NE6 70 aa9.56□□□□□ -0.88
TRAF4-214ENST00000580073 KCNRGQ8N5I3 272 aa9.56□□□□□ -0.88
TRAF4-214ENST00000580073 SCGB1C1Q8TD33 95 aa9.56□□□□□ -0.88
TRAF4-214ENST00000580073 LINC00052Q96N35 136 aa9.56□□□□□ -0.88
TRAF4-214ENST00000580073 PLA2G2EQ9NZK7 142 aa9.56□□□□□ -0.88
TRAF4-214ENST00000580073 M0R2N4 97 aa9.55□□□□□ -0.88
TRAF4-214ENST00000580073 ISLRO14498 428 aa9.55□□□□□ -0.88
TRAF4-214ENST00000580073 IGLC2P0DOY2 106 aa9.55□□□□□ -0.88
TRAF4-214ENST00000580073 FAM3BP58499 235 aaPredicted RBP9.55□□□□□ -0.88
TRAF4-214ENST00000580073 RAB2AP61019 212 aa9.55□□□□□ -0.88
TRAF4-214ENST00000580073 ZNF709Q8N972 641 aa9.55□□□□□ -0.88
TRAF4-214ENST00000580073 C15orf53Q8NAA6 179 aa9.55□□□□□ -0.88
TRAF4-214ENST00000580073 OR4B1Q8NGF8 309 aa9.55□□□□□ -0.88
TRAF4-214ENST00000580073 OR1L4Q8NGR5 311 aa9.55□□□□□ -0.88
TRAF4-214ENST00000580073 ZNF503Q96F45 646 aa9.55□□□□□ -0.88
TRAF4-214ENST00000580073 SLC25A2Q9BXI2 301 aa9.55□□□□□ -0.88
TRAF4-214ENST00000580073 RPRMQ9NS64 109 aa9.55□□□□□ -0.88
TRAF4-214ENST00000580073 DKK2Q9UBU2 259 aa9.55□□□□□ -0.88
TRAF4-214ENST00000580073 TIMM9Q9Y5J7 89 aa9.55□□□□□ -0.88
TRAF4-214ENST00000580073 A0A087X0K7 114 aa9.54□□□□□ -0.88
TRAF4-214ENST00000580073 C17orf112F2Z3M2 114 aa9.54□□□□□ -0.88
TRAF4-214ENST00000580073 SLC17A3O00476 420 aa9.54□□□□□ -0.88
TRAF4-214ENST00000580073 RTL8CO15255 209 aa9.54□□□□□ -0.88
TRAF4-214ENST00000580073 PYYP10082 97 aa9.54□□□□□ -0.88
TRAF4-214ENST00000580073 GALR1P47211 349 aa9.54□□□□□ -0.88
TRAF4-214ENST00000580073 PSG9Q00887 426 aa9.54□□□□□ -0.88
TRAF4-214ENST00000580073 RRN3P1Q2M238 152 aa9.54□□□□□ -0.88
TRAF4-214ENST00000580073 LGALSLQ3ZCW2 172 aaPredicted RBP9.54□□□□□ -0.88
TRAF4-214ENST00000580073 GDF5OSQ5U4N7 250 aa9.54□□□□□ -0.88
TRAF4-214ENST00000580073 FAM222AQ5U5X8 452 aa9.54□□□□□ -0.88
TRAF4-214ENST00000580073 FAM78BQ5VT40 261 aa9.54□□□□□ -0.88
TRAF4-214ENST00000580073 AKAP14Q86UN6 197 aa9.54□□□□□ -0.88
TRAF4-214ENST00000580073 GPR82Q96P67 336 aa9.54□□□□□ -0.88
TRAF4-214ENST00000580073 PFDN5Q99471 154 aa9.54□□□□□ -0.88
TRAF4-214ENST00000580073 ZNF586Q9NXT0 402 aa9.54□□□□□ -0.88
TRAF4-214ENST00000580073 PKHD1P08F94 4074 aa9.54□□□□□ -0.88
TRAF4-214ENST00000580073 LOC102723971A0A1B0GUV8 181 aa9.53□□□□□ -0.88
TRAF4-214ENST00000580073 IGKV3-20P01619 116 aa9.53□□□□□ -0.88
TRAF4-214ENST00000580073 C1QBP02746 253 aa9.53□□□□□ -0.88
TRAF4-214ENST00000580073 RPL7P18124 248 aaKnown RBP9.53□□□□□ -0.88
TRAF4-214ENST00000580073 DAD1P61803 113 aa9.53□□□□□ -0.88
TRAF4-214ENST00000580073 ZNF266Q14584 549 aa9.53□□□□□ -0.88
TRAF4-214ENST00000580073 ZNF345Q14585 488 aa9.53□□□□□ -0.88
TRAF4-214ENST00000580073 RNF182Q8N6D2 247 aa9.53□□□□□ -0.88
TRAF4-214ENST00000580073 OR2G3Q8NGZ4 309 aa9.53□□□□□ -0.88
TRAF4-214ENST00000580073 SAT2Q96F10 170 aaPredicted RBP9.53□□□□□ -0.88
TRAF4-214ENST00000580073 TMEM208Q9BTX3 173 aa9.53□□□□□ -0.88
TRAF4-214ENST00000580073 F6UB75 175 aa9.52□□□□□ -0.89
TRAF4-214ENST00000580073 NDUFB4O95168 129 aa9.52□□□□□ -0.89
TRAF4-214ENST00000580073 HTN3P15516 51 aa9.52□□□□□ -0.89
TRAF4-214ENST00000580073 FXYD7P58549 80 aa9.52□□□□□ -0.89
TRAF4-214ENST00000580073 C1orf134Q5TEV5 83 aa9.52□□□□□ -0.89
TRAF4-214ENST00000580073 TMUB2Q71RG4 321 aa9.52□□□□□ -0.89
TRAF4-214ENST00000580073 SSX7Q7RTT5 188 aa9.52□□□□□ -0.89
TRAF4-214ENST00000580073 BPIFA4PQ86YQ2 179 aa9.52□□□□□ -0.89
TRAF4-214ENST00000580073 PSMG3Q9BT73 122 aaPredicted RBP9.52□□□□□ -0.89
TRAF4-214ENST00000580073 FUT9Q9Y231 359 aa9.52□□□□□ -0.89
TRAF4-214ENST00000580073 FAT2Q9NYQ8 4349 aa9.51□□□□□ -0.89
TRAF4-214ENST00000580073 IGLV2-18A0A075B6J9 118 aa9.51□□□□□ -0.89
TRAF4-214ENST00000580073 TAAR5O14804 337 aa9.51□□□□□ -0.89
TRAF4-214ENST00000580073 Q6ZR54 194 aa9.51□□□□□ -0.89
TRAF4-214ENST00000580073 C16orf92Q96LL3 132 aa9.51□□□□□ -0.89
TRAF4-214ENST00000580073 ARPC5LQ9BPX5 153 aa9.51□□□□□ -0.89
TRAF4-214ENST00000580073 ATG101Q9BSB4 218 aa9.51□□□□□ -0.89
TRAF4-214ENST00000580073 ZNF331Q9NQX6 463 aaPredicted RBP9.51□□□□□ -0.89
TRAF4-214ENST00000580073 KCNIP2Q9NS61 270 aa9.51□□□□□ -0.89
TRAF4-214ENST00000580073 TMEM14CQ9P0S9 112 aa9.51□□□□□ -0.89
TRAF4-214ENST00000580073 YTHDF2Q9Y5A9 579 aaKnown RBP9.51□□□□□ -0.89
TRAF4-214ENST00000580073 BORCS7-ASMTA0A0B4J1R7 106 aa9.5□□□□□ -0.89
TRAF4-214ENST00000580073 A0A0D9SG52 128 aa9.5□□□□□ -0.89
TRAF4-214ENST00000580073 A0A0J9YX75 114 aa9.5□□□□□ -0.89
TRAF4-214ENST00000580073 BCL2L11O43521 198 aa9.5□□□□□ -0.89
TRAF4-214ENST00000580073 DUSP14O95147 198 aaKnown RBP9.5□□□□□ -0.89
TRAF4-214ENST00000580073 INSP01308 110 aa9.5□□□□□ -0.89
TRAF4-214ENST00000580073 M6PRP20645 277 aa9.5□□□□□ -0.89
TRAF4-214ENST00000580073 ZNF726P1Q15940 193 aa9.5□□□□□ -0.89
TRAF4-214ENST00000580073 ACOT6Q3I5F7 207 aaPredicted RBP9.5□□□□□ -0.89
TRAF4-214ENST00000580073 FAM122CQ6P4D5 195 aa9.5□□□□□ -0.89
TRAF4-214ENST00000580073 OR10G4Q8NGN3 311 aa9.5□□□□□ -0.89
TRAF4-214ENST00000580073 OR10G9Q8NGN4 311 aa9.5□□□□□ -0.89
TRAF4-214ENST00000580073 OR10G7Q8NGN6 311 aa9.5□□□□□ -0.89
TRAF4-214ENST00000580073 FXYD5Q96DB9 178 aa9.5□□□□□ -0.89
TRAF4-214ENST00000580073 MRPL32Q9BYC8 188 aaKnown RBP9.5□□□□□ -0.89
TRAF4-214ENST00000580073 TRBV19A0A075B6N1 114 aa9.49□□□□□ -0.89
TRAF4-214ENST00000580073 LYRM9A8MSI8 78 aa9.49□□□□□ -0.89
TRAF4-214ENST00000580073 PRAC2D3DTV9 90 aa9.49□□□□□ -0.89
TRAF4-214ENST00000580073 HMGB3O15347 200 aaKnown RBP9.49□□□□□ -0.89
TRAF4-214ENST00000580073 OR10J4P0C629 311 aa9.49□□□□□ -0.89
TRAF4-214ENST00000580073 HIST1H1EP10412 219 aaKnown RBP9.49□□□□□ -0.89
TRAF4-214ENST00000580073 TMEM88Q6PEY1 159 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms