RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 ZNF705FA8MVS1 300 aaPredicted RBP11.46□□□□□ -0.57
SLC6A4-205ENST00000579221 F6UB75 175 aa11.46□□□□□ -0.57
SLC6A4-205ENST00000579221 DEFB1P60022 68 aa11.46□□□□□ -0.57
SLC6A4-205ENST00000579221 NUTF2P61970 127 aaKnown RBP11.46□□□□□ -0.57
SLC6A4-205ENST00000579221 ICAM4Q14773 271 aa11.46□□□□□ -0.57
SLC6A4-205ENST00000579221 GDF5OSQ5U4N7 250 aa11.46□□□□□ -0.57
SLC6A4-205ENST00000579221 EXOC3-AS1Q8N2X6 119 aa11.46□□□□□ -0.57
SLC6A4-205ENST00000579221 OR4B1Q8NGF8 309 aa11.46□□□□□ -0.57
SLC6A4-205ENST00000579221 FAM213BQ8TBF2 198 aa11.46□□□□□ -0.57
SLC6A4-205ENST00000579221 CLUHP3Q96NS8 147 aa11.46□□□□□ -0.57
SLC6A4-205ENST00000579221 MEGF8Q7Z7M0 2845 aa11.45□□□□□ -0.58
SLC6A4-205ENST00000579221 FAM74A1Q5RGS3 127 aa11.45□□□□□ -0.58
SLC6A4-205ENST00000579221 SSX7Q7RTT5 188 aa11.45□□□□□ -0.58
SLC6A4-205ENST00000579221 IQCF2Q8IXL9 164 aa11.45□□□□□ -0.58
SLC6A4-205ENST00000579221 OR8A1Q8NGG7 326 aa11.45□□□□□ -0.58
SLC6A4-205ENST00000579221 OR10J6PQ8NGY7 276 aa11.45□□□□□ -0.58
SLC6A4-205ENST00000579221 SUN5Q8TC36 379 aa11.45□□□□□ -0.58
SLC6A4-205ENST00000579221 PHYHIPLQ96FC7 376 aa11.45□□□□□ -0.58
SLC6A4-205ENST00000579221 Q9H3A6 140 aa11.45□□□□□ -0.58
SLC6A4-205ENST00000579221 ZMAT4Q9H898 229 aa11.45□□□□□ -0.58
SLC6A4-205ENST00000579221 MAP1LC3B2A6NCE7 125 aa11.44□□□□□ -0.58
SLC6A4-205ENST00000579221 PGPA6NDG6 321 aa11.44□□□□□ -0.58
SLC6A4-205ENST00000579221 IGKV3-20P01619 116 aa11.44□□□□□ -0.58
SLC6A4-205ENST00000579221 CSN1S1P47710 185 aa11.44□□□□□ -0.58
SLC6A4-205ENST00000579221 FHITP49789 147 aa11.44□□□□□ -0.58
SLC6A4-205ENST00000579221 MBD3L1Q8WWY6 194 aa11.44□□□□□ -0.58
SLC6A4-205ENST00000579221 MAP1LC3BQ9GZQ8 125 aa11.44□□□□□ -0.58
SLC6A4-205ENST00000579221 BOLA1Q9Y3E2 137 aa11.44□□□□□ -0.58
SLC6A4-205ENST00000579221 H2AFB1P0C5Y9 115 aa11.43□□□□□ -0.58
SLC6A4-205ENST00000579221 ZNF705DP0CH99 300 aaPredicted RBP11.43□□□□□ -0.58
SLC6A4-205ENST00000579221 ZNF705BP0CI00 300 aaPredicted RBP11.43□□□□□ -0.58
SLC6A4-205ENST00000579221 SULT1A2P50226 295 aa11.43□□□□□ -0.58
SLC6A4-205ENST00000579221 CNN1P51911 297 aaKnown RBP11.43□□□□□ -0.58
SLC6A4-205ENST00000579221 FGF8P55075 233 aaPredicted RBP11.43□□□□□ -0.58
SLC6A4-205ENST00000579221 HIST1H1AQ02539 215 aaPredicted RBP11.43□□□□□ -0.58
SLC6A4-205ENST00000579221 Q6ZWC4 215 aa11.43□□□□□ -0.58
SLC6A4-205ENST00000579221 RXFP4Q8TDU9 374 aa11.43□□□□□ -0.58
SLC6A4-205ENST00000579221 SFT2D1Q8WV19 159 aa11.43□□□□□ -0.58
SLC6A4-205ENST00000579221 SPATA25Q9BR10 227 aa11.43□□□□□ -0.58
SLC6A4-205ENST00000579221 TM2D3Q9BRN9 247 aa11.43□□□□□ -0.58
SLC6A4-205ENST00000579221 OTORQ9NRC9 128 aa11.43□□□□□ -0.58
SLC6A4-205ENST00000579221 PPP1R14DQ9NXH3 145 aa11.43□□□□□ -0.58
SLC6A4-205ENST00000579221 PRAC2D3DTV9 90 aa11.42□□□□□ -0.58
SLC6A4-205ENST00000579221 M0R3E3 92 aa11.42□□□□□ -0.58
SLC6A4-205ENST00000579221 CA1P00915 261 aaPredicted RBP11.42□□□□□ -0.58
SLC6A4-205ENST00000579221 CMTM2Q8TAZ6 248 aa11.42□□□□□ -0.58
SLC6A4-205ENST00000579221 TMPRSS5Q9H3S3 457 aa11.42□□□□□ -0.58
SLC6A4-205ENST00000579221 A8MTW9 85 aa11.41□□□□□ -0.58
SLC6A4-205ENST00000579221 C1QTNF4Q9BXJ3 329 aa11.41□□□□□ -0.58
SLC6A4-205ENST00000579221 A0A1W2PRE2 83 aa11.4□□□□□ -0.58
SLC6A4-205ENST00000579221 TEX46H3BTG2 121 aa11.4□□□□□ -0.58
SLC6A4-205ENST00000579221 BOLA2-SMG1P6H3BVE0 249 aa11.4□□□□□ -0.58
SLC6A4-205ENST00000579221 PRB4P10163 310 aaPredicted RBP11.4□□□□□ -0.58
SLC6A4-205ENST00000579221 ARL6IP6Q8N6S5 226 aa11.4□□□□□ -0.58
SLC6A4-205ENST00000579221 LINC00477Q96M19 166 aa11.4□□□□□ -0.58
SLC6A4-205ENST00000579221 RCHY1Q96PM5 261 aa11.4□□□□□ -0.58
SLC6A4-205ENST00000579221 TP53TG1Q9Y2A0 90 aa11.4□□□□□ -0.58
SLC6A4-205ENST00000579221 SPRY2O43597 315 aa11.39□□□□□ -0.59
SLC6A4-205ENST00000579221 AMBPP02760 352 aa11.39□□□□□ -0.59
SLC6A4-205ENST00000579221 FXYD7P58549 80 aa11.39□□□□□ -0.59
SLC6A4-205ENST00000579221 SUMO1P63165 101 aaKnown RBP11.39□□□□□ -0.59
SLC6A4-205ENST00000579221 AMTNQ6UX39 209 aa11.39□□□□□ -0.59
SLC6A4-205ENST00000579221 ALKAL2Q6UX46 152 aa11.39□□□□□ -0.59
SLC6A4-205ENST00000579221 RNF183Q96D59 192 aa11.39□□□□□ -0.59
SLC6A4-205ENST00000579221 NKX6-2Q9C056 277 aaPredicted RBP11.39□□□□□ -0.59
SLC6A4-205ENST00000579221 XCL2Q9UBD3 114 aa11.39□□□□□ -0.59
SLC6A4-205ENST00000579221 RBAKDNA6NC62 111 aa11.38□□□□□ -0.59
SLC6A4-205ENST00000579221 ZNF705EA8MWA4 302 aaPredicted RBP11.38□□□□□ -0.59
SLC6A4-205ENST00000579221 DIRC3C9JPN6 131 aa11.38□□□□□ -0.59
SLC6A4-205ENST00000579221 NPIPB6E9PJ23 425 aa11.38□□□□□ -0.59
SLC6A4-205ENST00000579221 HBE1P02100 147 aa11.38□□□□□ -0.59
SLC6A4-205ENST00000579221 SLC25A5P05141 298 aaKnown RBP11.38□□□□□ -0.59
SLC6A4-205ENST00000579221 GIG44P09565 113 aaPredicted RBP11.38□□□□□ -0.59
SLC6A4-205ENST00000579221 PPT1P50897 306 aa11.38□□□□□ -0.59
SLC6A4-205ENST00000579221 UBE2G2P60604 165 aa11.38□□□□□ -0.59
SLC6A4-205ENST00000579221 ERCC8Q13216 396 aa11.38□□□□□ -0.59
SLC6A4-205ENST00000579221 DEFB135Q30KP9 77 aa11.38□□□□□ -0.59
SLC6A4-205ENST00000579221 OVOL2Q9BRP0 275 aa11.38□□□□□ -0.59
SLC6A4-205ENST00000579221 SLC35B3Q9H1N7 401 aa11.38□□□□□ -0.59
SLC6A4-205ENST00000579221 IGKV2-40A0A087WW87 121 aaPredicted RBP11.37□□□□□ -0.59
SLC6A4-205ENST00000579221 TRAV1-1A0A0B4J248 108 aa11.37□□□□□ -0.59
SLC6A4-205ENST00000579221 A0A1B0GV50 99 aa11.37□□□□□ -0.59
SLC6A4-205ENST00000579221 IGKV2D-40P01614 121 aaPredicted RBP11.37□□□□□ -0.59
SLC6A4-205ENST00000579221 TSPOP30536 169 aa11.37□□□□□ -0.59
SLC6A4-205ENST00000579221 BLOC1S1P78537 153 aa11.37□□□□□ -0.59
SLC6A4-205ENST00000579221 TMEM78Q5T7P6 136 aa11.37□□□□□ -0.59
SLC6A4-205ENST00000579221 C9orf47Q6ZRZ4 202 aa11.37□□□□□ -0.59
SLC6A4-205ENST00000579221 AGPAT4-IT1Q9H0P7 198 aa11.37□□□□□ -0.59
SLC6A4-205ENST00000579221 RETNQ9HD89 108 aa11.37□□□□□ -0.59
SLC6A4-205ENST00000579221 RPH3ALQ9UNE2 315 aa11.37□□□□□ -0.59
SLC6A4-205ENST00000579221 FAM74A7A6NL05 159 aa11.36□□□□□ -0.59
SLC6A4-205ENST00000579221 C5orf17Q8NAS9 161 aa11.36□□□□□ -0.59
SLC6A4-205ENST00000579221 ODF3Q96PU9 254 aa11.36□□□□□ -0.59
SLC6A4-205ENST00000579221 VGLL1Q99990 258 aa11.36□□□□□ -0.59
SLC6A4-205ENST00000579221 EPDR1Q9UM22 224 aa11.36□□□□□ -0.59
SLC6A4-205ENST00000579221 YTHDF2Q9Y5A9 579 aaKnown RBP11.36□□□□□ -0.59
SLC6A4-205ENST00000579221 U3KQK5 164 aa11.36□□□□□ -0.59
SLC6A4-205ENST00000579221 SERTM2A0A1B0GWG4 89 aa11.35□□□□□ -0.59
SLC6A4-205ENST00000579221 K7EQM0 130 aa11.35□□□□□ -0.59
SLC6A4-205ENST00000579221 M0R2Z0 102 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms