RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 OR10J6PQ8NGY7 276 aa10.62□□□□□ -0.71
SS18-212ENST00000579061 MRPL53Q96EL3 112 aaKnown RBP10.62□□□□□ -0.71
SS18-212ENST00000579061 APLNQ9ULZ1 77 aa10.62□□□□□ -0.71
SS18-212ENST00000579061 TRBV19A0A075B6N1 114 aa10.61□□□□□ -0.71
SS18-212ENST00000579061 DEFB131BA0A096LNP1 70 aa10.61□□□□□ -0.71
SS18-212ENST00000579061 CDKN1BP46527 198 aa10.61□□□□□ -0.71
SS18-212ENST00000579061 EMP1P54849 157 aa10.61□□□□□ -0.71
SS18-212ENST00000579061 BAP18Q8IXM2 172 aa10.61□□□□□ -0.71
SS18-212ENST00000579061 C20orf144Q9BQM9 153 aa10.61□□□□□ -0.71
SS18-212ENST00000579061 MRPL32Q9BYC8 188 aaKnown RBP10.61□□□□□ -0.71
SS18-212ENST00000579061 MBD2Q9UBB5 411 aa10.61□□□□□ -0.71
SS18-212ENST00000579061 PRELID1Q9Y255 219 aa10.61□□□□□ -0.71
SS18-212ENST00000579061 KMT2AQ03164 3969 aa10.61□□□□□ -0.71
SS18-212ENST00000579061 TRAV12-2A0A075B6T6 113 aa10.6□□□□□ -0.71
SS18-212ENST00000579061 IFNA5P01569 189 aa10.6□□□□□ -0.71
SS18-212ENST00000579061 GCSAMLQ5JQS6 135 aa10.6□□□□□ -0.71
SS18-212ENST00000579061 FAM222AQ5U5X8 452 aa10.6□□□□□ -0.71
SS18-212ENST00000579061 ZNF767PQ75MW2 155 aa10.6□□□□□ -0.71
SS18-212ENST00000579061 FAM167A-AS1Q96KT0 104 aa10.6□□□□□ -0.71
SS18-212ENST00000579061 ODF3Q96PU9 254 aa10.6□□□□□ -0.71
SS18-212ENST00000579061 NIPSNAP3BQ9BS92 247 aa10.6□□□□□ -0.71
SS18-212ENST00000579061 PARD6GQ9BYG4 376 aaPredicted RBP10.6□□□□□ -0.71
SS18-212ENST00000579061 YTHDF2Q9Y5A9 579 aaKnown RBP10.6□□□□□ -0.71
SS18-212ENST00000579061 VPS13DQ5THJ4 4388 aa10.59□□□□□ -0.71
SS18-212ENST00000579061 IGHV4-4A0A075B6R2 117 aa10.59□□□□□ -0.71
SS18-212ENST00000579061 PRAC2D3DTV9 90 aa10.59□□□□□ -0.71
SS18-212ENST00000579061 SCGB1C1Q8TD33 95 aa10.59□□□□□ -0.71
SS18-212ENST00000579061 SLC25A2Q9BXI2 301 aa10.59□□□□□ -0.71
SS18-212ENST00000579061 FUT9Q9Y231 359 aa10.59□□□□□ -0.71
SS18-212ENST00000579061 TIMM9Q9Y5J7 89 aa10.59□□□□□ -0.71
SS18-212ENST00000579061 DNAH6Q9C0G6 4158 aa10.58□□□□□ -0.71
SS18-212ENST00000579061 ZNF705GA8MUZ8 300 aaPredicted RBP10.58□□□□□ -0.72
SS18-212ENST00000579061 NPIPB6E9PJ23 425 aa10.58□□□□□ -0.72
SS18-212ENST00000579061 NDUFB4O95168 129 aa10.58□□□□□ -0.72
SS18-212ENST00000579061 PYYP10082 97 aa10.58□□□□□ -0.72
SS18-212ENST00000579061 TAS2R60P59551 318 aa10.58□□□□□ -0.72
SS18-212ENST00000579061 MIR17HGQ75NE6 70 aa10.58□□□□□ -0.72
SS18-212ENST00000579061 RPP25LQ8N5L8 163 aaKnown RBP10.58□□□□□ -0.72
SS18-212ENST00000579061 LINC01587Q99440 93 aa10.58□□□□□ -0.72
SS18-212ENST00000579061 MED28Q9H204 178 aa10.58□□□□□ -0.72
SS18-212ENST00000579061 OR51M1Q9H341 326 aa10.58□□□□□ -0.72
SS18-212ENST00000579061 LYRM9A8MSI8 78 aa10.57□□□□□ -0.72
SS18-212ENST00000579061 NBEAP1P0C6P0 100 aa10.57□□□□□ -0.72
SS18-212ENST00000579061 ASB13Q8WXK3 278 aa10.57□□□□□ -0.72
SS18-212ENST00000579061 FAM210BQ96KR6 192 aa10.57□□□□□ -0.72
SS18-212ENST00000579061 AAMDCQ9H7C9 122 aa10.57□□□□□ -0.72
SS18-212ENST00000579061 H7BYZ3 331 aa10.56□□□□□ -0.72
SS18-212ENST00000579061 M0R3E3 92 aa10.56□□□□□ -0.72
SS18-212ENST00000579061 CT45A10P0DMU9 189 aa10.56□□□□□ -0.72
SS18-212ENST00000579061 PRB4P10163 310 aaPredicted RBP10.56□□□□□ -0.72
SS18-212ENST00000579061 LEPP41159 167 aa10.56□□□□□ -0.72
SS18-212ENST00000579061 DAD1P61803 113 aa10.56□□□□□ -0.72
SS18-212ENST00000579061 FCN2Q15485 313 aa10.56□□□□□ -0.72
SS18-212ENST00000579061 FFAR4Q5NUL3 377 aa10.56□□□□□ -0.72
SS18-212ENST00000579061 ZNF493Q6ZR52 646 aa10.56□□□□□ -0.72
SS18-212ENST00000579061 BLNKQ8WV28 456 aa10.56□□□□□ -0.72
SS18-212ENST00000579061 C16orf74Q96GX8 76 aa10.56□□□□□ -0.72
SS18-212ENST00000579061 LINC00477Q96M19 166 aa10.56□□□□□ -0.72
SS18-212ENST00000579061 NDUFAF3Q9BU61 184 aa10.56□□□□□ -0.72
SS18-212ENST00000579061 PAXXQ9BUH6 204 aa10.56□□□□□ -0.72
SS18-212ENST00000579061 SMIM3Q9BZL3 60 aa10.56□□□□□ -0.72
SS18-212ENST00000579061 PRM2P04554 102 aa10.55□□□□□ -0.72
SS18-212ENST00000579061 AZU1P20160 251 aa10.55□□□□□ -0.72
SS18-212ENST00000579061 RNF141Q8WVD5 230 aa10.55□□□□□ -0.72
SS18-212ENST00000579061 FXYD5Q96DB9 178 aa10.55□□□□□ -0.72
SS18-212ENST00000579061 WFDC1Q9HC57 220 aa10.55□□□□□ -0.72
SS18-212ENST00000579061 PLAC8L1A1L4L8 177 aa10.54□□□□□ -0.72
SS18-212ENST00000579061 OR7C2O60412 319 aa10.54□□□□□ -0.72
SS18-212ENST00000579061 GIPP09681 153 aaPredicted RBP10.54□□□□□ -0.72
SS18-212ENST00000579061 TAS2R45P59539 299 aa10.54□□□□□ -0.72
SS18-212ENST00000579061 ICAM4Q14773 271 aa10.54□□□□□ -0.72
SS18-212ENST00000579061 KIR3DS1Q14943 382 aa10.54□□□□□ -0.72
SS18-212ENST00000579061 KHDC3LQ587J8 217 aa10.54□□□□□ -0.72
SS18-212ENST00000579061 GFI1BQ5VTD9 330 aa10.54□□□□□ -0.72
SS18-212ENST00000579061 C9orf47Q6ZRZ4 202 aa10.54□□□□□ -0.72
SS18-212ENST00000579061 LYPD1Q8N2G4 141 aa10.54□□□□□ -0.72
SS18-212ENST00000579061 EXOC3-AS1Q8N2X6 119 aa10.54□□□□□ -0.72
SS18-212ENST00000579061 AQP10Q96PS8 301 aa10.54□□□□□ -0.72
SS18-212ENST00000579061 PLA2G2EQ9NZK7 142 aa10.54□□□□□ -0.72
SS18-212ENST00000579061 SLC25A5P05141 298 aaKnown RBP10.53□□□□□ -0.72
SS18-212ENST00000579061 OR10J4P0C629 311 aa10.53□□□□□ -0.72
SS18-212ENST00000579061 ZNF266Q14584 549 aa10.53□□□□□ -0.72
SS18-212ENST00000579061 ACOT6Q3I5F7 207 aaPredicted RBP10.53□□□□□ -0.72
SS18-212ENST00000579061 RNASE8Q8TDE3 154 aaKnown RBP10.53□□□□□ -0.72
SS18-212ENST00000579061 TMEM263Q8WUH6 116 aaKnown RBP10.53□□□□□ -0.72
SS18-212ENST00000579061 ZNF503Q96F45 646 aa10.53□□□□□ -0.72
SS18-212ENST00000579061 FAM19A4Q96LR4 140 aa10.53□□□□□ -0.72
SS18-212ENST00000579061 TIMM8BQ9Y5J9 83 aaPredicted RBP10.53□□□□□ -0.72
SS18-212ENST00000579061 NMBP08949 121 aa10.52□□□□□ -0.73
SS18-212ENST00000579061 P0DMU3 169 aa10.52□□□□□ -0.73
SS18-212ENST00000579061 FAM231AP0DMU4 169 aa10.52□□□□□ -0.73
SS18-212ENST00000579061 FAM231CP0DMU5 169 aa10.52□□□□□ -0.73
SS18-212ENST00000579061 M6PRP20645 277 aa10.52□□□□□ -0.73
SS18-212ENST00000579061 RGS21Q2M5E4 152 aa10.52□□□□□ -0.73
SS18-212ENST00000579061 CCDC28AQ8IWP9 274 aa10.52□□□□□ -0.73
SS18-212ENST00000579061 PYGO2Q9BRQ0 406 aa10.52□□□□□ -0.73
SS18-212ENST00000579061 AGPAT4-IT1Q9H0P7 198 aa10.52□□□□□ -0.73
SS18-212ENST00000579061 KLLNB2CW77 178 aa10.51□□□□□ -0.73
SS18-212ENST00000579061 HTN1P15515 57 aa10.51□□□□□ -0.73
SS18-212ENST00000579061 CRISP2P16562 243 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms