RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 H3BTX0 84 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 BOLA2-SMG1P6H3BVE0 249 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 ISLRO14498 428 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 JTBO76095 146 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 SEC11BP0C7V7 166 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 ZNF688P0C7X2 276 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 HIST1H1EP10412 219 aaKnown RBP2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 HLA-DRB4P13762 266 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 RPL7P18124 248 aaKnown RBP2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 M6PRP20645 277 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 TFPI2P48307 235 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 FHITP49789 147 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 MEOX2P50222 304 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 NKX2-5P52952 324 aaPredicted RBP2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 DEFB131AP59861 70 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 SERF2P84101 59 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 RAB31Q13636 194 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 GUCA2BQ16661 112 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 HAGHQ16775 308 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 FAM78BQ5VT40 261 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 Q6ZRG5 221 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 RBPMS2Q6ZRY4 209 aaKnown RBP2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 OR8I2Q8N0Y5 310 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 RNF182Q8N6D2 247 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 ZNF709Q8N972 641 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 INO80EQ8NBZ0 244 aaPredicted RBP2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 STXBP6Q8NFX7 210 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 OR1L4Q8NGR5 311 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 MRAPQ8TCY5 172 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 RAB24Q969Q5 203 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 PHYHIPLQ96FC7 376 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 FAM19A4Q96LR4 140 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 HYLS1Q96M11 299 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 GPR82Q96P67 336 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 ARPC5LQ9BPX5 153 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 HRH4Q9H3N8 390 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 SAV1Q9H4B6 383 aaPredicted RBP2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 SLC25A22Q9H936 323 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 KCNIP2Q9NS61 270 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 HLA-DRB4X5D2U9 266 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 ALMS1Q8TCU4 4167 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 DNAH6Q9C0G6 4158 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 KIR2DL5BA0A0G2JN68 375 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 KIR2DL5BA0A0G2JPC4 375 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 A0A0J9YX75 114 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 KNCNA6PVL3 124 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 GGTLC3B5MD39 225 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 C17orf112F2Z3M2 114 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 H3BMM0 161 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 M0R3E3 92 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 CRXO43186 299 aaPredicted RBP2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 IFNA5P01569 189 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 SNRPCP09234 159 aaKnown RBP2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 RBMY1A1P0DJD3 496 aaKnown RBP2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 RBMY1CP0DJD4 496 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 ARL14EPLP0DKL9 152 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 PRB4P10163 310 aaPredicted RBP2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 BMI1P35226 326 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 GALR1P47211 349 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 CDC34P49427 236 aaPredicted RBP2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 RHOBP62745 196 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 PDE6HQ13956 83 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 RBMY1FQ15415 496 aaKnown RBP2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 PSG3Q16557 428 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 GUK1Q16774 197 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 ZFP69Q49AA0 526 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 TMEM41BQ5BJD5 291 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 PSMG4Q5JS54 123 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 FAM122CQ6P4D5 195 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 LCN15Q6UWW0 184 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 FOXI2Q6ZQN5 318 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 GTSCR1Q86UQ5 136 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 BPIFA4PQ86YQ2 179 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 CCDC28AQ8IWP9 274 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 BAP18Q8IXM2 172 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 KIR2DL5AQ8N109 375 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 OR10G4Q8NGN3 311 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 OR10G9Q8NGN4 311 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 OR10G7Q8NGN6 311 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 KIR2DL5BQ8NHK3 375 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 SCGB1C1Q8TD33 95 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 TMED6Q8WW62 240 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 MBD3L1Q8WWY6 194 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 GNPNAT1Q96EK6 184 aaPredicted RBP2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 MRPL53Q96EL3 112 aaKnown RBP2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 NARS2Q96I59 477 aaKnown RBP2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 SLC50A1Q9BRV3 221 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 OR51M1Q9H341 326 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 SRD5A3Q9H8P0 318 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 RETNQ9HD89 108 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 ZMAT5Q9UDW3 170 aaKnown RBP2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 TENM2Q9NT68 2774 aa2.75□□□□□ -1.97
SMARCE1-215ENST00000578995 BORCS7-ASMTA0A0B4J1R7 106 aa2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 TRAV1-1A0A0B4J248 108 aa2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 CTXND1A0A1B0GTU2 59 aa2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 ZNF705FA8MVS1 300 aaPredicted RBP2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 HMGB3O15347 200 aaKnown RBP2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 IGLV2-11P01706 119 aa2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 OR10J4P0C629 311 aa2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 NBEAP1P0C6P0 100 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms