RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 RANP62826 216 aaKnown RBP8.44□□□□□ -1.06
ERBB2-208ENST00000578630 UBE2L3P68036 154 aaKnown RBP8.44□□□□□ -1.06
ERBB2-208ENST00000578630 HIST1H1AQ02539 215 aaPredicted RBP8.44□□□□□ -1.06
ERBB2-208ENST00000578630 RAB24Q969Q5 203 aa8.44□□□□□ -1.06
ERBB2-208ENST00000578630 DNAH9Q9NYC9 4486 aa8.43□□□□□ -1.06
ERBB2-208ENST00000578630 ZNF705FA8MVS1 300 aaPredicted RBP8.43□□□□□ -1.06
ERBB2-208ENST00000578630 NDUFB4O95168 129 aa8.43□□□□□ -1.06
ERBB2-208ENST00000578630 CXorf1O96002 111 aa8.43□□□□□ -1.06
ERBB2-208ENST00000578630 AMBPP02760 352 aa8.43□□□□□ -1.06
ERBB2-208ENST00000578630 SEC11BP0C7V7 166 aa8.43□□□□□ -1.06
ERBB2-208ENST00000578630 STAG3L2P0CL84 134 aa8.43□□□□□ -1.06
ERBB2-208ENST00000578630 STAG3L3P0CL85 134 aa8.43□□□□□ -1.06
ERBB2-208ENST00000578630 TPT1P13693 172 aaKnown RBP8.43□□□□□ -1.06
ERBB2-208ENST00000578630 ICAM4Q14773 271 aa8.43□□□□□ -1.06
ERBB2-208ENST00000578630 LGALSLQ3ZCW2 172 aaPredicted RBP8.43□□□□□ -1.06
ERBB2-208ENST00000578630 FAM74A1Q5RGS3 127 aa8.43□□□□□ -1.06
ERBB2-208ENST00000578630 EIF5AL1Q6IS14 154 aaKnown RBP8.43□□□□□ -1.06
ERBB2-208ENST00000578630 BAP18Q8IXM2 172 aa8.43□□□□□ -1.06
ERBB2-208ENST00000578630 OR11H2Q8NH07 326 aa8.43□□□□□ -1.06
ERBB2-208ENST00000578630 XCL2Q9UBD3 114 aa8.43□□□□□ -1.06
ERBB2-208ENST00000578630 UMAD1C9J7I0 102 aa8.42□□□□□ -1.06
ERBB2-208ENST00000578630 HMGB3O15347 200 aaKnown RBP8.42□□□□□ -1.06
ERBB2-208ENST00000578630 GIG44P09565 113 aaPredicted RBP8.42□□□□□ -1.06
ERBB2-208ENST00000578630 ZNF705DP0CH99 300 aaPredicted RBP8.42□□□□□ -1.06
ERBB2-208ENST00000578630 ZNF705BP0CI00 300 aaPredicted RBP8.42□□□□□ -1.06
ERBB2-208ENST00000578630 FXYD7P58549 80 aa8.42□□□□□ -1.06
ERBB2-208ENST00000578630 EXOC3-AS1Q8N2X6 119 aa8.42□□□□□ -1.06
ERBB2-208ENST00000578630 RXFP4Q8TDU9 374 aa8.42□□□□□ -1.06
ERBB2-208ENST00000578630 ZNF503Q96F45 646 aa8.42□□□□□ -1.06
ERBB2-208ENST00000578630 TMEM167BQ9NRX6 74 aa8.42□□□□□ -1.06
ERBB2-208ENST00000578630 NBEAL2Q6ZNJ1 2754 aa8.41□□□□□ -1.06
ERBB2-208ENST00000578630 CTXND1A0A1B0GTU2 59 aa8.41□□□□□ -1.06
ERBB2-208ENST00000578630 A0A1B0GVG6 124 aa8.41□□□□□ -1.06
ERBB2-208ENST00000578630 A8MTW9 85 aa8.41□□□□□ -1.06
ERBB2-208ENST00000578630 EIF3GO75821 320 aaKnown RBP eCLIP8.41□□□□□ -1.06
ERBB2-208ENST00000578630 ARL14EPLP0DKL9 152 aa8.41□□□□□ -1.06
ERBB2-208ENST00000578630 TSPOP30536 169 aa8.41□□□□□ -1.06
ERBB2-208ENST00000578630 ZFP69Q49AA0 526 aa8.41□□□□□ -1.06
ERBB2-208ENST00000578630 STOML3Q8TAV4 291 aa8.41□□□□□ -1.06
ERBB2-208ENST00000578630 CMTM2Q8TAZ6 248 aa8.41□□□□□ -1.06
ERBB2-208ENST00000578630 LINC00477Q96M19 166 aa8.41□□□□□ -1.06
ERBB2-208ENST00000578630 SLC35B3Q9H1N7 401 aa8.41□□□□□ -1.06
ERBB2-208ENST00000578630 Q9H3A6 140 aa8.41□□□□□ -1.06
ERBB2-208ENST00000578630 GOLT1BQ9Y3E0 138 aa8.41□□□□□ -1.06
ERBB2-208ENST00000578630 PGPA6NDG6 321 aa8.4□□□□□ -1.06
ERBB2-208ENST00000578630 PRAC2D3DTV9 90 aa8.4□□□□□ -1.06
ERBB2-208ENST00000578630 M0R3E3 92 aa8.4□□□□□ -1.06
ERBB2-208ENST00000578630 GCHFRP30047 84 aa8.4□□□□□ -1.06
ERBB2-208ENST00000578630 AMTNQ6UX39 209 aa8.4□□□□□ -1.06
ERBB2-208ENST00000578630 SLC51BQ86UW2 128 aa8.4□□□□□ -1.06
ERBB2-208ENST00000578630 IQCF2Q8IXL9 164 aa8.4□□□□□ -1.06
ERBB2-208ENST00000578630 CSNK1G2-AS1Q8NCQ2 148 aa8.4□□□□□ -1.06
ERBB2-208ENST00000578630 IL17DQ8TAD2 202 aa8.4□□□□□ -1.06
ERBB2-208ENST00000578630 PHYHIPLQ96FC7 376 aa8.4□□□□□ -1.06
ERBB2-208ENST00000578630 IGF2BP2-AS1Q96M15 143 aa8.4□□□□□ -1.06
ERBB2-208ENST00000578630 OTORQ9NRC9 128 aa8.4□□□□□ -1.06
ERBB2-208ENST00000578630 SMIM9A6NGZ8 99 aa8.39□□□□□ -1.07
ERBB2-208ENST00000578630 BOLA2-SMG1P6H3BVE0 249 aa8.39□□□□□ -1.07
ERBB2-208ENST00000578630 MIFP14174 115 aa8.39□□□□□ -1.07
ERBB2-208ENST00000578630 CDKN1BP46527 198 aa8.39□□□□□ -1.07
ERBB2-208ENST00000578630 SPINK13Q1W4C9 94 aa8.39□□□□□ -1.07
ERBB2-208ENST00000578630 DPPA3Q6W0C5 159 aa8.39□□□□□ -1.07
ERBB2-208ENST00000578630 ARL6IP6Q8N6S5 226 aa8.39□□□□□ -1.07
ERBB2-208ENST00000578630 TMEM208Q9BTX3 173 aa8.39□□□□□ -1.07
ERBB2-208ENST00000578630 EDA2RQ9HAV5 297 aa8.39□□□□□ -1.07
ERBB2-208ENST00000578630 IGHV3OR16-12A0A075B7B8 117 aa8.38□□□□□ -1.07
ERBB2-208ENST00000578630 ZNF705EA8MWA4 302 aaPredicted RBP8.38□□□□□ -1.07
ERBB2-208ENST00000578630 NPIPB6E9PJ23 425 aa8.38□□□□□ -1.07
ERBB2-208ENST00000578630 M0R2Z0 102 aa8.38□□□□□ -1.07
ERBB2-208ENST00000578630 PRB4P10163 310 aaPredicted RBP8.38□□□□□ -1.07
ERBB2-208ENST00000578630 LEPP41159 167 aa8.38□□□□□ -1.07
ERBB2-208ENST00000578630 RAB5CP51148 216 aa8.38□□□□□ -1.07
ERBB2-208ENST00000578630 TMEM78Q5T7P6 136 aa8.38□□□□□ -1.07
ERBB2-208ENST00000578630 C9orf47Q6ZRZ4 202 aa8.38□□□□□ -1.07
ERBB2-208ENST00000578630 SUN5Q8TC36 379 aa8.38□□□□□ -1.07
ERBB2-208ENST00000578630 ODF3Q96PU9 254 aa8.38□□□□□ -1.07
ERBB2-208ENST00000578630 HUWE1Q7Z6Z7 4374 aaKnown RBP8.38□□□□□ -1.07
ERBB2-208ENST00000578630 A0A0J9YWU9 116 aa8.37□□□□□ -1.07
ERBB2-208ENST00000578630 A0A1W2PRE2 83 aa8.37□□□□□ -1.07
ERBB2-208ENST00000578630 RBAKDNA6NC62 111 aa8.37□□□□□ -1.07
ERBB2-208ENST00000578630 MAP1LC3B2A6NCE7 125 aa8.37□□□□□ -1.07
ERBB2-208ENST00000578630 DIRC3C9JPN6 131 aa8.37□□□□□ -1.07
ERBB2-208ENST00000578630 INSP01308 110 aa8.37□□□□□ -1.07
ERBB2-208ENST00000578630 SLC25A5P05141 298 aaKnown RBP8.37□□□□□ -1.07
ERBB2-208ENST00000578630 CT45A10P0DMU9 189 aa8.37□□□□□ -1.07
ERBB2-208ENST00000578630 SUMO1P63165 101 aaKnown RBP8.37□□□□□ -1.07
ERBB2-208ENST00000578630 CD300CQ08708 224 aa8.37□□□□□ -1.07
ERBB2-208ENST00000578630 ERCC8Q13216 396 aa8.37□□□□□ -1.07
ERBB2-208ENST00000578630 ZNF726P1Q15940 193 aa8.37□□□□□ -1.07
ERBB2-208ENST00000578630 ZNF705AQ6ZN79 300 aaPredicted RBP8.37□□□□□ -1.07
ERBB2-208ENST00000578630 TMEM256Q8N2U0 113 aa8.37□□□□□ -1.07
ERBB2-208ENST00000578630 FAM213BQ8TBF2 198 aa8.37□□□□□ -1.07
ERBB2-208ENST00000578630 TMED6Q8WW62 240 aa8.37□□□□□ -1.07
ERBB2-208ENST00000578630 NEU1Q99519 415 aa8.37□□□□□ -1.07
ERBB2-208ENST00000578630 NKX6-2Q9C056 277 aaPredicted RBP8.37□□□□□ -1.07
ERBB2-208ENST00000578630 MAP1LC3BQ9GZQ8 125 aa8.37□□□□□ -1.07
ERBB2-208ENST00000578630 AGPAT4-IT1Q9H0P7 198 aa8.37□□□□□ -1.07
ERBB2-208ENST00000578630 COL7A1Q02388 2944 aa8.36□□□□□ -1.07
ERBB2-208ENST00000578630 TRAV12-2A0A075B6T6 113 aa8.36□□□□□ -1.07
ERBB2-208ENST00000578630 C3orf84H3BNL1 204 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms