RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 FOXA3P55318 350 aaPredicted RBP8.55□□□□□ -1.04
SKA2-204ENST00000578519 HBBP68871 147 aa8.55□□□□□ -1.04
SKA2-204ENST00000578519 MRPL54Q6P161 138 aaKnown RBP8.55□□□□□ -1.04
SKA2-204ENST00000578519 TMEM136Q6ZRR5 245 aa8.55□□□□□ -1.04
SKA2-204ENST00000578519 KRTAP1-3Q8IUG1 177 aa8.55□□□□□ -1.04
SKA2-204ENST00000578519 HIST3H2BBQ8N257 126 aa8.55□□□□□ -1.04
SKA2-204ENST00000578519 Q8N2B8 174 aa8.55□□□□□ -1.04
SKA2-204ENST00000578519 GLMPQ8WWB7 406 aa8.55□□□□□ -1.04
SKA2-204ENST00000578519 UBE2E2Q96LR5 201 aa8.55□□□□□ -1.04
SKA2-204ENST00000578519 LINC00477Q96M19 166 aa8.55□□□□□ -1.04
SKA2-204ENST00000578519 PRR25Q96S07 402 aa8.55□□□□□ -1.04
SKA2-204ENST00000578519 KLK15Q9H2R5 256 aa8.55□□□□□ -1.04
SKA2-204ENST00000578519 PPP1R14DQ9NXH3 145 aa8.55□□□□□ -1.04
SKA2-204ENST00000578519 IGHV3OR16-8A0A075B7F1 116 aa8.54□□□□□ -1.04
SKA2-204ENST00000578519 SMAD7O15105 426 aaKnown RBP8.54□□□□□ -1.04
SKA2-204ENST00000578519 ZNF207O43670 478 aaKnown RBP8.54□□□□□ -1.04
SKA2-204ENST00000578519 LGALS1P09382 135 aaKnown RBP8.54□□□□□ -1.04
SKA2-204ENST00000578519 CBLN1P23435 193 aa8.54□□□□□ -1.04
SKA2-204ENST00000578519 PAFAH1B2P68402 229 aa8.54□□□□□ -1.04
SKA2-204ENST00000578519 Q0VG73 95 aa8.54□□□□□ -1.04
SKA2-204ENST00000578519 OR10J3Q5JRS4 329 aa8.54□□□□□ -1.04
SKA2-204ENST00000578519 C8orf86Q6ZUL3 223 aa8.54□□□□□ -1.04
SKA2-204ENST00000578519 BAGE3Q86Y29 109 aa8.54□□□□□ -1.04
SKA2-204ENST00000578519 SIGLECL1Q8N7X8 197 aa8.54□□□□□ -1.04
SKA2-204ENST00000578519 OR10J6PQ8NGY7 276 aa8.54□□□□□ -1.04
SKA2-204ENST00000578519 C12orf57Q99622 126 aa8.54□□□□□ -1.04
SKA2-204ENST00000578519 ZNF702PQ9H963 129 aa8.54□□□□□ -1.04
SKA2-204ENST00000578519 SMPXQ9UHP9 88 aa8.54□□□□□ -1.04
SKA2-204ENST00000578519 USP24Q9UPU5 2620 aa8.54□□□□□ -1.04
SKA2-204ENST00000578519 IGSF10Q6WRI0 2623 aa8.53□□□□□ -1.04
SKA2-204ENST00000578519 IGHV3-66A0A0C4DH42 116 aa8.53□□□□□ -1.04
SKA2-204ENST00000578519 A0A1B0GUT8 65 aa8.53□□□□□ -1.04
SKA2-204ENST00000578519 SPINK4O60575 86 aa8.53□□□□□ -1.04
SKA2-204ENST00000578519 ZNF138P52744 262 aa8.53□□□□□ -1.04
SKA2-204ENST00000578519 RPL11P62913 178 aaKnown RBP8.53□□□□□ -1.04
SKA2-204ENST00000578519 HIST1H1AQ02539 215 aaPredicted RBP8.53□□□□□ -1.04
SKA2-204ENST00000578519 DNLZQ5SXM8 178 aa8.53□□□□□ -1.04
SKA2-204ENST00000578519 Q6ZS46 218 aa8.53□□□□□ -1.04
SKA2-204ENST00000578519 RNF152Q8N8N0 203 aa8.53□□□□□ -1.04
SKA2-204ENST00000578519 WFDC11Q8NEX6 87 aa8.53□□□□□ -1.04
SKA2-204ENST00000578519 WFDC12Q8WWY7 111 aa8.53□□□□□ -1.04
SKA2-204ENST00000578519 ZC2HC1AQ96GY0 325 aa8.53□□□□□ -1.04
SKA2-204ENST00000578519 RHPN1-AS1Q9BWJ2 59 aa8.53□□□□□ -1.04
SKA2-204ENST00000578519 NRN1Q9NPD7 142 aa8.53□□□□□ -1.04
SKA2-204ENST00000578519 YAE1D1Q9NRH1 226 aa8.53□□□□□ -1.04
SKA2-204ENST00000578519 IGKV2-40A0A087WW87 121 aaPredicted RBP8.52□□□□□ -1.05
SKA2-204ENST00000578519 A8MWP6 167 aa8.52□□□□□ -1.05
SKA2-204ENST00000578519 LGALS9O00182 355 aa8.52□□□□□ -1.05
SKA2-204ENST00000578519 CA1P00915 261 aaPredicted RBP8.52□□□□□ -1.05
SKA2-204ENST00000578519 IGKV2D-40P01614 121 aaPredicted RBP8.52□□□□□ -1.05
SKA2-204ENST00000578519 C9orf47Q6ZRZ4 202 aa8.52□□□□□ -1.05
SKA2-204ENST00000578519 TCF24Q7RTU0 167 aa8.52□□□□□ -1.05
SKA2-204ENST00000578519 REC114Q7Z4M0 266 aa8.52□□□□□ -1.05
SKA2-204ENST00000578519 ZNF738Q8NE65 137 aa8.52□□□□□ -1.05
SKA2-204ENST00000578519 PGLYRP4Q96LB8 373 aa8.52□□□□□ -1.05
SKA2-204ENST00000578519 GPR61Q9BZJ8 451 aa8.52□□□□□ -1.05
SKA2-204ENST00000578519 MED13LQ71F56 2210 aa8.52□□□□□ -1.05
SKA2-204ENST00000578519 AKAP6Q13023 2319 aa8.51□□□□□ -1.05
SKA2-204ENST00000578519 IGHV3OR16-13A0A075B7E8 117 aa8.51□□□□□ -1.05
SKA2-204ENST00000578519 IGHV3-49A0A0A0MS15 119 aa8.51□□□□□ -1.05
SKA2-204ENST00000578519 IGHV3-74A0A0B4J1X5 117 aa8.51□□□□□ -1.05
SKA2-204ENST00000578519 TRBV7-9A0A0J9YWB2 115 aa8.51□□□□□ -1.05
SKA2-204ENST00000578519 SH2D1AO60880 128 aa8.51□□□□□ -1.05
SKA2-204ENST00000578519 APOHP02749 345 aaPredicted RBP8.51□□□□□ -1.05
SKA2-204ENST00000578519 FABP4P15090 132 aa8.51□□□□□ -1.05
SKA2-204ENST00000578519 CAMPP49913 170 aa8.51□□□□□ -1.05
SKA2-204ENST00000578519 LINC00322Q6ZN03 302 aaPredicted RBP8.51□□□□□ -1.05
SKA2-204ENST00000578519 OR10D4PQ8NGN7 298 aa8.51□□□□□ -1.05
SKA2-204ENST00000578519 DPF1Q92782 380 aa8.51□□□□□ -1.05
SKA2-204ENST00000578519 PACRGQ96M98 296 aaPredicted RBP8.51□□□□□ -1.05
SKA2-204ENST00000578519 TMEM160Q9NX00 188 aa8.51□□□□□ -1.05
SKA2-204ENST00000578519 ZZEF1O43149 2961 aa8.51□□□□□ -1.05
SKA2-204ENST00000578519 ZNF462Q96JM2 2506 aa8.5□□□□□ -1.05
SKA2-204ENST00000578519 A0A1B0GXF2 115 aa8.5□□□□□ -1.05
SKA2-204ENST00000578519 FAM181BA6NEQ2 426 aa8.5□□□□□ -1.05
SKA2-204ENST00000578519 F2Z2F3 143 aa8.5□□□□□ -1.05
SKA2-204ENST00000578519 TRBV12-3P01733 135 aa8.5□□□□□ -1.05
SKA2-204ENST00000578519 S100A12P80511 92 aa8.5□□□□□ -1.05
SKA2-204ENST00000578519 UNQ9165/PRO28630Q6UXU0 137 aa8.5□□□□□ -1.05
SKA2-204ENST00000578519 MYOZ3Q8TDC0 251 aa8.5□□□□□ -1.05
SKA2-204ENST00000578519 ZNF418Q8TF45 676 aaPredicted RBP8.5□□□□□ -1.05
SKA2-204ENST00000578519 C8orf49Q96NF6 230 aa8.5□□□□□ -1.05
SKA2-204ENST00000578519 JMJD8Q96S16 334 aa8.5□□□□□ -1.05
SKA2-204ENST00000578519 VGLL1Q99990 258 aa8.5□□□□□ -1.05
SKA2-204ENST00000578519 PEMTQ9UBM1 199 aa8.5□□□□□ -1.05
SKA2-204ENST00000578519 HRNRQ86YZ3 2850 aaPredicted RBP8.49□□□□□ -1.05
SKA2-204ENST00000578519 TRAV8-2A0A0B4J237 113 aa8.49□□□□□ -1.05
SKA2-204ENST00000578519 ZNF705FA8MVS1 300 aaPredicted RBP8.49□□□□□ -1.05
SKA2-204ENST00000578519 ORM1P02763 201 aa8.49□□□□□ -1.05
SKA2-204ENST00000578519 RPLP1P05386 114 aaKnown RBP8.49□□□□□ -1.05
SKA2-204ENST00000578519 ESDP10768 282 aa8.49□□□□□ -1.05
SKA2-204ENST00000578519 SNRPD3P62318 126 aaKnown RBP8.49□□□□□ -1.05
SKA2-204ENST00000578519 TMEM95Q3KNT9 176 aa8.49□□□□□ -1.05
SKA2-204ENST00000578519 TM4SF20Q53R12 229 aa8.49□□□□□ -1.05
SKA2-204ENST00000578519 PDZD11Q5EBL8 140 aa8.49□□□□□ -1.05
SKA2-204ENST00000578519 HIST1H2BLQ99880 126 aa8.49□□□□□ -1.05
SKA2-204ENST00000578519 AGPAT4-IT1Q9H0P7 198 aa8.49□□□□□ -1.05
SKA2-204ENST00000578519 PRRC2AP48634 2157 aaKnown RBP8.48□□□□□ -1.05
SKA2-204ENST00000578519 RAB4AP20338 218 aa8.48□□□□□ -1.05
SKA2-204ENST00000578519 HLA-DMBP28068 263 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms