RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 HIST1H1AQ02539 215 aaPredicted RBP11.54□□□□□ -0.56
VAPA-204ENST00000577901 ZNF266Q14584 549 aa11.54□□□□□ -0.56
VAPA-204ENST00000577901 FFAR4Q5NUL3 377 aa11.54□□□□□ -0.56
VAPA-204ENST00000577901 INO80EQ8NBZ0 244 aaPredicted RBP11.54□□□□□ -0.56
VAPA-204ENST00000577901 AQP10Q96PS8 301 aa11.54□□□□□ -0.56
VAPA-204ENST00000577901 WFDC1Q9HC57 220 aa11.54□□□□□ -0.56
VAPA-204ENST00000577901 GOLT1BQ9Y3E0 138 aa11.54□□□□□ -0.56
VAPA-204ENST00000577901 TIMM9Q9Y5J7 89 aa11.54□□□□□ -0.56
VAPA-204ENST00000577901 DNAH17Q9UFH2 4485 aa11.54□□□□□ -0.56
VAPA-204ENST00000577901 IGHV4-28A0A0C4DH34 117 aa11.53□□□□□ -0.56
VAPA-204ENST00000577901 SMIM9A6NGZ8 99 aa11.53□□□□□ -0.56
VAPA-204ENST00000577901 SLC17A3O00476 420 aa11.53□□□□□ -0.56
VAPA-204ENST00000577901 Q5BKY6 102 aa11.53□□□□□ -0.56
VAPA-204ENST00000577901 ZNF705AQ6ZN79 300 aaPredicted RBP11.53□□□□□ -0.56
VAPA-204ENST00000577901 MIR17HGQ75NE6 70 aa11.53□□□□□ -0.56
VAPA-204ENST00000577901 OR2T35Q8NGX2 323 aa11.53□□□□□ -0.56
VAPA-204ENST00000577901 SLC25A2Q9BXI2 301 aa11.53□□□□□ -0.56
VAPA-204ENST00000577901 FUT9Q9Y231 359 aa11.53□□□□□ -0.56
VAPA-204ENST00000577901 PKHD1P08F94 4074 aa11.52□□□□□ -0.57
VAPA-204ENST00000577901 TRBV19A0A075B6N1 114 aa11.52□□□□□ -0.57
VAPA-204ENST00000577901 IGHV3OR16-12A0A075B7B8 117 aa11.52□□□□□ -0.57
VAPA-204ENST00000577901 RBMY1A1P0DJD3 496 aaKnown RBP11.52□□□□□ -0.57
VAPA-204ENST00000577901 RBMY1CP0DJD4 496 aa11.52□□□□□ -0.57
VAPA-204ENST00000577901 PDE6HQ13956 83 aa11.52□□□□□ -0.57
VAPA-204ENST00000577901 RBMY1FQ15415 496 aaKnown RBP11.52□□□□□ -0.57
VAPA-204ENST00000577901 AMTNQ6UX39 209 aa11.52□□□□□ -0.57
VAPA-204ENST00000577901 OR10J6PQ8NGY7 276 aa11.52□□□□□ -0.57
VAPA-204ENST00000577901 NEU1Q99519 415 aa11.52□□□□□ -0.57
VAPA-204ENST00000577901 OR51M1Q9H341 326 aa11.52□□□□□ -0.57
VAPA-204ENST00000577901 ZNF705FA8MVS1 300 aaPredicted RBP11.51□□□□□ -0.57
VAPA-204ENST00000577901 PYYP10082 97 aa11.51□□□□□ -0.57
VAPA-204ENST00000577901 SPINK13Q1W4C9 94 aa11.51□□□□□ -0.57
VAPA-204ENST00000577901 ACOT6Q3I5F7 207 aaPredicted RBP11.51□□□□□ -0.57
VAPA-204ENST00000577901 BLNKQ8WV28 456 aa11.51□□□□□ -0.57
VAPA-204ENST00000577901 FAM167A-AS1Q96KT0 104 aa11.51□□□□□ -0.57
VAPA-204ENST00000577901 IGF2BP2-AS1Q96M15 143 aa11.51□□□□□ -0.57
VAPA-204ENST00000577901 TMEM208Q9BTX3 173 aa11.51□□□□□ -0.57
VAPA-204ENST00000577901 PAXXQ9BUH6 204 aa11.51□□□□□ -0.57
VAPA-204ENST00000577901 FXYD6-FXYD2A0A087WZ82 144 aa11.5□□□□□ -0.57
VAPA-204ENST00000577901 BOLA2-SMG1P6H3BVE0 249 aa11.5□□□□□ -0.57
VAPA-204ENST00000577901 NBEAP1P0C6P0 100 aa11.5□□□□□ -0.57
VAPA-204ENST00000577901 TAS2R45P59539 299 aa11.5□□□□□ -0.57
VAPA-204ENST00000577901 Q6ZTC4 211 aa11.5□□□□□ -0.57
VAPA-204ENST00000577901 AAMDCQ9H7C9 122 aa11.5□□□□□ -0.57
VAPA-204ENST00000577901 PRELID1Q9Y255 219 aa11.5□□□□□ -0.57
VAPA-204ENST00000577901 IGHV4-4A0A075B6R2 117 aa11.49□□□□□ -0.57
VAPA-204ENST00000577901 TRAV10A0A0B4J240 114 aa11.49□□□□□ -0.57
VAPA-204ENST00000577901 A0A1W2PPV4 95 aa11.49□□□□□ -0.57
VAPA-204ENST00000577901 M0R2Z0 102 aa11.49□□□□□ -0.57
VAPA-204ENST00000577901 OR7C2O60412 319 aa11.49□□□□□ -0.57
VAPA-204ENST00000577901 INSP01308 110 aa11.49□□□□□ -0.57
VAPA-204ENST00000577901 LINC00336Q6ZUF6 198 aa11.49□□□□□ -0.57
VAPA-204ENST00000577901 RNF141Q8WVD5 230 aa11.49□□□□□ -0.57
VAPA-204ENST00000577901 MRPL53Q96EL3 112 aaKnown RBP11.49□□□□□ -0.57
VAPA-204ENST00000577901 TNFSF18Q9UNG2 199 aa11.49□□□□□ -0.57
VAPA-204ENST00000577901 RFNGQ9Y644 331 aa11.49□□□□□ -0.57
VAPA-204ENST00000577901 DYNC1H1Q14204 4646 aaKnown RBP11.49□□□□□ -0.57
VAPA-204ENST00000577901 TMEM189A5PLL7 270 aa11.48□□□□□ -0.57
VAPA-204ENST00000577901 PRAC2D3DTV9 90 aa11.48□□□□□ -0.57
VAPA-204ENST00000577901 NDUFB4O95168 129 aa11.48□□□□□ -0.57
VAPA-204ENST00000577901 HBE1P02100 147 aa11.48□□□□□ -0.57
VAPA-204ENST00000577901 OR10J4P0C629 311 aa11.48□□□□□ -0.57
VAPA-204ENST00000577901 M6PRP20645 277 aa11.48□□□□□ -0.57
VAPA-204ENST00000577901 CDKN1BP46527 198 aa11.48□□□□□ -0.57
VAPA-204ENST00000577901 KHDC3LQ587J8 217 aa11.48□□□□□ -0.57
VAPA-204ENST00000577901 C1orf158Q8N1D5 194 aa11.48□□□□□ -0.57
VAPA-204ENST00000577901 FXYD5Q96DB9 178 aa11.48□□□□□ -0.57
VAPA-204ENST00000577901 BORCS7-ASMTA0A0B4J1R7 106 aa11.47□□□□□ -0.57
VAPA-204ENST00000577901 CRXO43186 299 aaPredicted RBP11.47□□□□□ -0.57
VAPA-204ENST00000577901 PRB4P10163 310 aaPredicted RBP11.47□□□□□ -0.57
VAPA-204ENST00000577901 TSPOP30536 169 aa11.47□□□□□ -0.57
VAPA-204ENST00000577901 EXOC3-AS1Q8N2X6 119 aa11.47□□□□□ -0.57
VAPA-204ENST00000577901 HSD17B11Q8NBQ5 300 aa11.47□□□□□ -0.57
VAPA-204ENST00000577901 OR10G4Q8NGN3 311 aa11.47□□□□□ -0.57
VAPA-204ENST00000577901 OR10G9Q8NGN4 311 aa11.47□□□□□ -0.57
VAPA-204ENST00000577901 OR10G7Q8NGN6 311 aa11.47□□□□□ -0.57
VAPA-204ENST00000577901 PSMG3Q9BT73 122 aaPredicted RBP11.47□□□□□ -0.57
VAPA-204ENST00000577901 TRAV12-2A0A075B6T6 113 aa11.46□□□□□ -0.57
VAPA-204ENST00000577901 RNF222A6NCQ9 220 aa11.46□□□□□ -0.57
VAPA-204ENST00000577901 M0R3E3 92 aa11.46□□□□□ -0.57
VAPA-204ENST00000577901 MBP02144 154 aa11.46□□□□□ -0.57
VAPA-204ENST00000577901 UBE2L3P68036 154 aaKnown RBP11.46□□□□□ -0.57
VAPA-204ENST00000577901 SERF2P84101 59 aa11.46□□□□□ -0.57
VAPA-204ENST00000577901 ICAM4Q14773 271 aa11.46□□□□□ -0.57
VAPA-204ENST00000577901 RRN3P1Q2M238 152 aa11.46□□□□□ -0.57
VAPA-204ENST00000577901 OR2G3Q8NGZ4 309 aa11.46□□□□□ -0.57
VAPA-204ENST00000577901 PKD1P98161 4303 aa11.46□□□□□ -0.58
VAPA-204ENST00000577901 ARPC5O15511 151 aa11.45□□□□□ -0.58
VAPA-204ENST00000577901 SPART-AS1P0CW21 52 aa11.45□□□□□ -0.58
VAPA-204ENST00000577901 ATP6V0CP27449 155 aa11.45□□□□□ -0.58
VAPA-204ENST00000577901 EMP1P54849 157 aa11.45□□□□□ -0.58
VAPA-204ENST00000577901 RAB2AP61019 212 aa11.45□□□□□ -0.58
VAPA-204ENST00000577901 LCE2AQ5TA79 106 aaPredicted RBP11.45□□□□□ -0.58
VAPA-204ENST00000577901 FAM122CQ6P4D5 195 aa11.45□□□□□ -0.58
VAPA-204ENST00000577901 BAP18Q8IXM2 172 aa11.45□□□□□ -0.58
VAPA-204ENST00000577901 LYPD1Q8N2G4 141 aa11.45□□□□□ -0.58
VAPA-204ENST00000577901 TMEM256Q8N2U0 113 aa11.45□□□□□ -0.58
VAPA-204ENST00000577901 GNPNAT1Q96EK6 184 aaPredicted RBP11.45□□□□□ -0.58
VAPA-204ENST00000577901 LINC01587Q99440 93 aa11.45□□□□□ -0.58
VAPA-204ENST00000577901 DNAH11Q96DT5 4516 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms