RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 CCDC59Q9P031 241 aaKnown RBP4.42□□□□□ -1.7
NUP88-212ENST00000576708 SCP2D1Q9UJQ7 156 aa4.42□□□□□ -1.7
NUP88-212ENST00000576708 PKD1P98161 4303 aa4.42□□□□□ -1.7
NUP88-212ENST00000576708 FABP12A6NFH5 140 aa4.41□□□□□ -1.7
NUP88-212ENST00000576708 SNRPGP15A8MWD9 76 aa4.41□□□□□ -1.7
NUP88-212ENST00000576708 H3BMQ9 156 aa4.41□□□□□ -1.7
NUP88-212ENST00000576708 H3BP45 60 aa4.41□□□□□ -1.7
NUP88-212ENST00000576708 SPART-AS1P0CW21 52 aa4.41□□□□□ -1.7
NUP88-212ENST00000576708 ID1P41134 155 aa4.41□□□□□ -1.7
NUP88-212ENST00000576708 PSMB3P49720 205 aa4.41□□□□□ -1.7
NUP88-212ENST00000576708 ZNF79Q15937 498 aa4.41□□□□□ -1.7
NUP88-212ENST00000576708 PSG3Q16557 428 aa4.41□□□□□ -1.7
NUP88-212ENST00000576708 FAM222AQ5U5X8 452 aa4.41□□□□□ -1.7
NUP88-212ENST00000576708 OR8G2PQ6IF36 304 aa4.41□□□□□ -1.7
NUP88-212ENST00000576708 FOXI2Q6ZQN5 318 aa4.41□□□□□ -1.7
NUP88-212ENST00000576708 OR8I2Q8N0Y5 310 aa4.41□□□□□ -1.7
NUP88-212ENST00000576708 MCFD2Q8NI22 146 aa4.41□□□□□ -1.7
NUP88-212ENST00000576708 COQ8AQ8NI60 647 aa4.41□□□□□ -1.7
NUP88-212ENST00000576708 RAB2BQ8WUD1 216 aa4.41□□□□□ -1.7
NUP88-212ENST00000576708 SCGB3A2Q96PL1 93 aa4.41□□□□□ -1.7
NUP88-212ENST00000576708 RSG1Q9BU20 258 aa4.41□□□□□ -1.7
NUP88-212ENST00000576708 NDUFAF3Q9BU61 184 aa4.41□□□□□ -1.7
NUP88-212ENST00000576708 SLC25A22Q9H936 323 aa4.41□□□□□ -1.7
NUP88-212ENST00000576708 RSL24D1Q9UHA3 163 aaKnown RBP4.41□□□□□ -1.7
NUP88-212ENST00000576708 RFNGQ9Y644 331 aa4.41□□□□□ -1.7
NUP88-212ENST00000576708 RYR1P21817 5038 aa4.4□□□□□ -1.7
NUP88-212ENST00000576708 PKHD1P08F94 4074 aa4.4□□□□□ -1.7
NUP88-212ENST00000576708 IGLV5-39A0A0G2JS06 123 aa4.4□□□□□ -1.71
NUP88-212ENST00000576708 A0A0J9YX75 114 aa4.4□□□□□ -1.71
NUP88-212ENST00000576708 SMIM9A6NGZ8 99 aa4.4□□□□□ -1.71
NUP88-212ENST00000576708 PCP4L1A6NKN8 68 aa4.4□□□□□ -1.71
NUP88-212ENST00000576708 PRSS46E5RG02 174 aa4.4□□□□□ -1.71
NUP88-212ENST00000576708 TEX46H3BTG2 121 aa4.4□□□□□ -1.71
NUP88-212ENST00000576708 HOXB5P09067 269 aa4.4□□□□□ -1.71
NUP88-212ENST00000576708 P0DMU3 169 aa4.4□□□□□ -1.71
NUP88-212ENST00000576708 FAM231AP0DMU4 169 aa4.4□□□□□ -1.71
NUP88-212ENST00000576708 FAM231CP0DMU5 169 aa4.4□□□□□ -1.71
NUP88-212ENST00000576708 ANXA3P12429 323 aa4.4□□□□□ -1.71
NUP88-212ENST00000576708 ORM2P19652 201 aa4.4□□□□□ -1.71
NUP88-212ENST00000576708 TMBIM6P55061 237 aa4.4□□□□□ -1.71
NUP88-212ENST00000576708 SRPXP78539 464 aa4.4□□□□□ -1.71
NUP88-212ENST00000576708 PSG9Q00887 426 aa4.4□□□□□ -1.71
NUP88-212ENST00000576708 PPP1R1AQ13522 171 aa4.4□□□□□ -1.71
NUP88-212ENST00000576708 VWC2Q2TAL6 325 aa4.4□□□□□ -1.71
NUP88-212ENST00000576708 PYDC2Q56P42 97 aa4.4□□□□□ -1.71
NUP88-212ENST00000576708 C1orf194Q5T5A4 169 aa4.4□□□□□ -1.71
NUP88-212ENST00000576708 EBLN2Q6P2I7 272 aa4.4□□□□□ -1.71
NUP88-212ENST00000576708 AMTNQ6UX39 209 aa4.4□□□□□ -1.71
NUP88-212ENST00000576708 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.4□□□□□ -1.71
NUP88-212ENST00000576708 LINC00336Q6ZUF6 198 aa4.4□□□□□ -1.71
NUP88-212ENST00000576708 ERASQ7Z444 233 aa4.4□□□□□ -1.71
NUP88-212ENST00000576708 UBE2DNLQ8IWF7 75 aa4.4□□□□□ -1.71
NUP88-212ENST00000576708 RNF182Q8N6D2 247 aa4.4□□□□□ -1.71
NUP88-212ENST00000576708 THAP8Q8NA92 274 aa4.4□□□□□ -1.71
NUP88-212ENST00000576708 MPLKIPQ8TAP9 179 aa4.4□□□□□ -1.71
NUP88-212ENST00000576708 TRGV9Q99603 122 aa4.4□□□□□ -1.71
NUP88-212ENST00000576708 C7orf50Q9BRJ6 194 aaKnown RBP4.4□□□□□ -1.71
NUP88-212ENST00000576708 NIPSNAP3BQ9BS92 247 aa4.4□□□□□ -1.71
NUP88-212ENST00000576708 CACFD1Q9UGQ2 172 aa4.4□□□□□ -1.71
NUP88-212ENST00000576708 GOLT1BQ9Y3E0 138 aa4.4□□□□□ -1.71
NUP88-212ENST00000576708 YTHDF2Q9Y5A9 579 aaKnown RBP4.4□□□□□ -1.71
NUP88-212ENST00000576708 ABCA13Q86UQ4 5058 aa4.4□□□□□ -1.71
NUP88-212ENST00000576708 TRAV26-1A0A087WT03 109 aa4.39□□□□□ -1.71
NUP88-212ENST00000576708 TRAV8-2A0A0B4J237 113 aa4.39□□□□□ -1.71
NUP88-212ENST00000576708 A0A0U1RRA0 63 aa4.39□□□□□ -1.71
NUP88-212ENST00000576708 A0A1B0GVG6 124 aa4.39□□□□□ -1.71
NUP88-212ENST00000576708 A0A1B0GW15 77 aa4.39□□□□□ -1.71
NUP88-212ENST00000576708 FBLL1A6NHQ2 334 aaKnown RBP4.39□□□□□ -1.71
NUP88-212ENST00000576708 ZNF98A6NK75 572 aa4.39□□□□□ -1.71
NUP88-212ENST00000576708 ZNF705GA8MUZ8 300 aaPredicted RBP4.39□□□□□ -1.71
NUP88-212ENST00000576708 SMLR1H3BR10 107 aa4.39□□□□□ -1.71
NUP88-212ENST00000576708 M0R2Z0 102 aa4.39□□□□□ -1.71
NUP88-212ENST00000576708 ISLRO14498 428 aa4.39□□□□□ -1.71
NUP88-212ENST00000576708 SYNGR2O43760 224 aa4.39□□□□□ -1.71
NUP88-212ENST00000576708 ADAP1O75689 374 aa4.39□□□□□ -1.71
NUP88-212ENST00000576708 CCNKO75909 580 aa4.39□□□□□ -1.71
NUP88-212ENST00000576708 SFT2D2O95562 160 aa4.39□□□□□ -1.71
NUP88-212ENST00000576708 HBE1P02100 147 aa4.39□□□□□ -1.71
NUP88-212ENST00000576708 PAX9P55771 341 aa4.39□□□□□ -1.71
NUP88-212ENST00000576708 FGL1Q08830 312 aa4.39□□□□□ -1.71
NUP88-212ENST00000576708 SPINK13Q1W4C9 94 aa4.39□□□□□ -1.71
NUP88-212ENST00000576708 SPANXN5Q5MJ07 72 aa4.39□□□□□ -1.71
NUP88-212ENST00000576708 GGNBP1Q5YKI7 109 aa4.39□□□□□ -1.71
NUP88-212ENST00000576708 LRTM2Q8N967 370 aa4.39□□□□□ -1.71
NUP88-212ENST00000576708 OR4C5Q8NGB2 326 aa4.39□□□□□ -1.71
NUP88-212ENST00000576708 OR1B1Q8NGR6 318 aa4.39□□□□□ -1.71
NUP88-212ENST00000576708 PACRGQ96M98 296 aaPredicted RBP4.39□□□□□ -1.71
NUP88-212ENST00000576708 RPRMQ9NS64 109 aa4.39□□□□□ -1.71
NUP88-212ENST00000576708 DOK5Q9P104 306 aa4.39□□□□□ -1.71
NUP88-212ENST00000576708 V9GYH0 126 aa4.39□□□□□ -1.71
NUP88-212ENST00000576708 TRAV12-2A0A075B6T6 113 aa4.38□□□□□ -1.71
NUP88-212ENST00000576708 DUXBA0A1W2PPF3 345 aa4.38□□□□□ -1.71
NUP88-212ENST00000576708 SMCO3A2RU48 225 aa4.38□□□□□ -1.71
NUP88-212ENST00000576708 TMEM189A5PLL7 270 aa4.38□□□□□ -1.71
NUP88-212ENST00000576708 CBY3A6NI87 242 aa4.38□□□□□ -1.71
NUP88-212ENST00000576708 A8MTW9 85 aa4.38□□□□□ -1.71
NUP88-212ENST00000576708 CRXO43186 299 aaPredicted RBP4.38□□□□□ -1.71
NUP88-212ENST00000576708 IFNA21P01568 189 aa4.38□□□□□ -1.71
NUP88-212ENST00000576708 SNRPCP09234 159 aaKnown RBP4.38□□□□□ -1.71
NUP88-212ENST00000576708 AZU1P20160 251 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 576.1 ms