RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 MRPL53Q96EL3 112 aaKnown RBP12.39□□□□□ -0.43
ERCC4-208ENST00000576348 STAB1Q9NY15 2570 aa12.38□□□□□ -0.43
ERCC4-208ENST00000576348 IZUMO1RA6ND01 250 aa12.38□□□□□ -0.43
ERCC4-208ENST00000576348 PEX7O00628 323 aa12.38□□□□□ -0.43
ERCC4-208ENST00000576348 HLA-DMBP28068 263 aa12.38□□□□□ -0.43
ERCC4-208ENST00000576348 AKR1C3P42330 323 aa12.38□□□□□ -0.43
ERCC4-208ENST00000576348 CD81P60033 236 aa12.38□□□□□ -0.43
ERCC4-208ENST00000576348 GNG5P63218 68 aa12.38□□□□□ -0.43
ERCC4-208ENST00000576348 SPATA3Q8NHX4 192 aa12.38□□□□□ -0.43
ERCC4-208ENST00000576348 HIST1H2BAQ96A08 127 aa12.38□□□□□ -0.43
ERCC4-208ENST00000576348 RPUSD4Q96CM3 377 aaKnown RBP12.38□□□□□ -0.43
ERCC4-208ENST00000576348 CITED4Q96RK1 184 aa12.38□□□□□ -0.43
ERCC4-208ENST00000576348 EPDR1Q9UM22 224 aa12.38□□□□□ -0.43
ERCC4-208ENST00000576348 SCO2A0A1W2PP80 73 aa12.37□□□□□ -0.43
ERCC4-208ENST00000576348 M0R3E3 92 aa12.37□□□□□ -0.43
ERCC4-208ENST00000576348 CMC4P56277 68 aaPredicted RBP12.37□□□□□ -0.43
ERCC4-208ENST00000576348 SRSF3P84103 164 aaKnown RBP12.37□□□□□ -0.43
ERCC4-208ENST00000576348 SLC7A5P1Q8MH63 180 aa12.37□□□□□ -0.43
ERCC4-208ENST00000576348 ATG101Q9BSB4 218 aa12.37□□□□□ -0.43
ERCC4-208ENST00000576348 ZNF705FA8MVS1 300 aaPredicted RBP12.36□□□□□ -0.43
ERCC4-208ENST00000576348 TMEM250H0YL14 139 aa12.36□□□□□ -0.43
ERCC4-208ENST00000576348 CNN1P51911 297 aaKnown RBP12.36□□□□□ -0.43
ERCC4-208ENST00000576348 GOLT1AQ6ZVE7 132 aa12.36□□□□□ -0.43
ERCC4-208ENST00000576348 CCDC28AQ8IWP9 274 aa12.36□□□□□ -0.43
ERCC4-208ENST00000576348 CYB561D1Q8N8Q1 229 aa12.36□□□□□ -0.43
ERCC4-208ENST00000576348 C20orf173Q96LM9 149 aa12.36□□□□□ -0.43
ERCC4-208ENST00000576348 SLC35B3Q9H1N7 401 aa12.36□□□□□ -0.43
ERCC4-208ENST00000576348 SERTM2A0A1B0GWG4 89 aa12.35□□□□□ -0.43
ERCC4-208ENST00000576348 TCRAP04437 139 aa12.35□□□□□ -0.43
ERCC4-208ENST00000576348 SRP19P09132 144 aaKnown RBP12.35□□□□□ -0.43
ERCC4-208ENST00000576348 UBE2G1P62253 170 aa12.35□□□□□ -0.43
ERCC4-208ENST00000576348 ZNF674Q2M3X9 581 aa12.35□□□□□ -0.43
ERCC4-208ENST00000576348 FAM24BQ8N5W8 94 aa12.35□□□□□ -0.43
ERCC4-208ENST00000576348 EIF4E3Q8N5X7 224 aaKnown RBP12.35□□□□□ -0.43
ERCC4-208ENST00000576348 ARL6IP6Q8N6S5 226 aa12.35□□□□□ -0.43
ERCC4-208ENST00000576348 OR10J6PQ8NGY7 276 aa12.35□□□□□ -0.43
ERCC4-208ENST00000576348 IGKV2-40A0A087WW87 121 aaPredicted RBP12.34□□□□□ -0.43
ERCC4-208ENST00000576348 DIRC3C9JPN6 131 aa12.34□□□□□ -0.43
ERCC4-208ENST00000576348 NDUFS6O75380 124 aaKnown RBP12.34□□□□□ -0.43
ERCC4-208ENST00000576348 IGKV2D-40P01614 121 aaPredicted RBP12.34□□□□□ -0.43
ERCC4-208ENST00000576348 SFTA3P0C7M3 94 aa12.34□□□□□ -0.43
ERCC4-208ENST00000576348 DEFB131AP59861 70 aa12.34□□□□□ -0.43
ERCC4-208ENST00000576348 KRTAP21-3Q3LHN1 58 aa12.34□□□□□ -0.43
ERCC4-208ENST00000576348 SOHLH1Q5JUK2 328 aa12.34□□□□□ -0.43
ERCC4-208ENST00000576348 EBLN2Q6P2I7 272 aa12.34□□□□□ -0.43
ERCC4-208ENST00000576348 C11orf52Q96A22 123 aa12.34□□□□□ -0.43
ERCC4-208ENST00000576348 ZMAT5Q9UDW3 170 aaKnown RBP12.34□□□□□ -0.43
ERCC4-208ENST00000576348 OR11H12B2RN74 326 aa12.33□□□□□ -0.44
ERCC4-208ENST00000576348 S100A9P06702 114 aaKnown RBP12.33□□□□□ -0.44
ERCC4-208ENST00000576348 PRB4P10163 310 aaPredicted RBP12.33□□□□□ -0.44
ERCC4-208ENST00000576348 HIST1H1AQ02539 215 aaPredicted RBP12.33□□□□□ -0.44
ERCC4-208ENST00000576348 GTSCR1Q86UQ5 136 aa12.33□□□□□ -0.44
ERCC4-208ENST00000576348 ZNF256Q9Y2P7 627 aaPredicted RBP12.33□□□□□ -0.44
ERCC4-208ENST00000576348 C9JQL5 133 aa12.32□□□□□ -0.44
ERCC4-208ENST00000576348 PRAC2D3DTV9 90 aa12.32□□□□□ -0.44
ERCC4-208ENST00000576348 TMEM78Q5T7P6 136 aa12.32□□□□□ -0.44
ERCC4-208ENST00000576348 SMIM7Q9BQ49 75 aa12.32□□□□□ -0.44
ERCC4-208ENST00000576348 MAP6D1Q9H9H5 199 aa12.32□□□□□ -0.44
ERCC4-208ENST00000576348 PPP1R14DQ9NXH3 145 aa12.32□□□□□ -0.44
ERCC4-208ENST00000576348 TRAV34A0A0B4J273 112 aa12.31□□□□□ -0.44
ERCC4-208ENST00000576348 FBLL1A6NHQ2 334 aaKnown RBP12.31□□□□□ -0.44
ERCC4-208ENST00000576348 RPL35P42766 123 aaKnown RBP12.31□□□□□ -0.44
ERCC4-208ENST00000576348 OXLD1Q5BKU9 147 aa12.31□□□□□ -0.44
ERCC4-208ENST00000576348 FMC1Q96HJ9 113 aa12.31□□□□□ -0.44
ERCC4-208ENST00000576348 TMEM218A2RU14 115 aa12.3□□□□□ -0.44
ERCC4-208ENST00000576348 RBAKDNA6NC62 111 aa12.3□□□□□ -0.44
ERCC4-208ENST00000576348 ZNF727A8MUV8 499 aa12.3□□□□□ -0.44
ERCC4-208ENST00000576348 F8W036 122 aa12.3□□□□□ -0.44
ERCC4-208ENST00000576348 DUSP14O95147 198 aaKnown RBP12.3□□□□□ -0.44
ERCC4-208ENST00000576348 BEAN1Q3B7T3 259 aa12.3□□□□□ -0.44
ERCC4-208ENST00000576348 FAM74A3Q4VXF1 159 aa12.3□□□□□ -0.44
ERCC4-208ENST00000576348 FOXI2Q6ZQN5 318 aa12.3□□□□□ -0.44
ERCC4-208ENST00000576348 PRNTQ86SH4 94 aa12.3□□□□□ -0.44
ERCC4-208ENST00000576348 TMEM75Q8N9X5 138 aa12.3□□□□□ -0.44
ERCC4-208ENST00000576348 OR8A1Q8NGG7 326 aa12.3□□□□□ -0.44
ERCC4-208ENST00000576348 C2CD4CQ8TF44 421 aa12.3□□□□□ -0.44
ERCC4-208ENST00000576348 SGK494Q96LW2 274 aa12.3□□□□□ -0.44
ERCC4-208ENST00000576348 LINC00479Q96M42 142 aa12.3□□□□□ -0.44
ERCC4-208ENST00000576348 NDFIP1Q9BT67 221 aa12.3□□□□□ -0.44
ERCC4-208ENST00000576348 PARLQ9H300 379 aa12.3□□□□□ -0.44
ERCC4-208ENST00000576348 F6UB75 175 aa12.29□□□□□ -0.44
ERCC4-208ENST00000576348 WIPF1O43516 503 aa12.29□□□□□ -0.44
ERCC4-208ENST00000576348 ZNF705DP0CH99 300 aaPredicted RBP12.29□□□□□ -0.44
ERCC4-208ENST00000576348 ZNF705BP0CI00 300 aaPredicted RBP12.29□□□□□ -0.44
ERCC4-208ENST00000576348 GNG4P50150 75 aa12.29□□□□□ -0.44
ERCC4-208ENST00000576348 TAS2R60P59551 318 aa12.29□□□□□ -0.44
ERCC4-208ENST00000576348 DEFB1P60022 68 aa12.29□□□□□ -0.44
ERCC4-208ENST00000576348 FLI1Q01543 452 aaPredicted RBP12.29□□□□□ -0.44
ERCC4-208ENST00000576348 ERCC8Q13216 396 aa12.29□□□□□ -0.44
ERCC4-208ENST00000576348 TMEM183BQ1AE95 376 aa12.29□□□□□ -0.44
ERCC4-208ENST00000576348 ODF3L2Q3SX64 289 aa12.29□□□□□ -0.44
ERCC4-208ENST00000576348 ACTL10Q5JWF8 245 aa12.29□□□□□ -0.44
ERCC4-208ENST00000576348 APRG1Q8IVJ8 170 aa12.29□□□□□ -0.44
ERCC4-208ENST00000576348 VGLL1Q99990 258 aa12.29□□□□□ -0.44
ERCC4-208ENST00000576348 DERL1Q9BUN8 251 aa12.29□□□□□ -0.44
ERCC4-208ENST00000576348 PSG8Q9UQ74 426 aa12.29□□□□□ -0.44
ERCC4-208ENST00000576348 TRAV8-1A0A0A6YYK1 113 aa12.28□□□□□ -0.44
ERCC4-208ENST00000576348 A0A0J9YX75 114 aa12.28□□□□□ -0.44
ERCC4-208ENST00000576348 KNCNA6PVL3 124 aa12.28□□□□□ -0.44
ERCC4-208ENST00000576348 CD7P09564 240 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms