RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 C1QTNF4Q9BXJ3 329 aa6.19□□□□□ -1.42
SMG6-216ENST00000575176 SMIM3Q9BZL3 60 aa6.19□□□□□ -1.42
SMG6-216ENST00000575176 TRAV12-2A0A075B6T6 113 aa6.18□□□□□ -1.42
SMG6-216ENST00000575176 RLN2P04090 185 aa6.18□□□□□ -1.42
SMG6-216ENST00000575176 HIST1H1EP10412 219 aaKnown RBP6.18□□□□□ -1.42
SMG6-216ENST00000575176 HIST1H1AQ02539 215 aaPredicted RBP6.18□□□□□ -1.42
SMG6-216ENST00000575176 RAB31Q13636 194 aa6.18□□□□□ -1.42
SMG6-216ENST00000575176 PDE6HQ13956 83 aa6.18□□□□□ -1.42
SMG6-216ENST00000575176 GUK1Q16774 197 aa6.18□□□□□ -1.42
SMG6-216ENST00000575176 PRR9Q5T870 116 aa6.18□□□□□ -1.42
SMG6-216ENST00000575176 EBLN2Q6P2I7 272 aa6.18□□□□□ -1.42
SMG6-216ENST00000575176 Q6ZRG5 221 aa6.18□□□□□ -1.42
SMG6-216ENST00000575176 SSX7Q7RTT5 188 aa6.18□□□□□ -1.42
SMG6-216ENST00000575176 C11orf45Q8TAV5 145 aa6.18□□□□□ -1.42
SMG6-216ENST00000575176 MRPL53Q96EL3 112 aaKnown RBP6.18□□□□□ -1.42
SMG6-216ENST00000575176 MRPL32Q9BYC8 188 aaKnown RBP6.18□□□□□ -1.42
SMG6-216ENST00000575176 DKK2Q9UBU2 259 aa6.18□□□□□ -1.42
SMG6-216ENST00000575176 TNFSF18Q9UNG2 199 aa6.18□□□□□ -1.42
SMG6-216ENST00000575176 FUT9Q9Y231 359 aa6.18□□□□□ -1.42
SMG6-216ENST00000575176 CXorf65A6NEN9 183 aa6.17□□□□□ -1.42
SMG6-216ENST00000575176 DUSP14O95147 198 aaKnown RBP6.17□□□□□ -1.42
SMG6-216ENST00000575176 CT45A10P0DMU9 189 aa6.17□□□□□ -1.42
SMG6-216ENST00000575176 AZU1P20160 251 aa6.17□□□□□ -1.42
SMG6-216ENST00000575176 S100A7P31151 101 aa6.17□□□□□ -1.42
SMG6-216ENST00000575176 RAB2AP61019 212 aa6.17□□□□□ -1.42
SMG6-216ENST00000575176 NUTF2P61970 127 aaKnown RBP6.17□□□□□ -1.42
SMG6-216ENST00000575176 GFI1BQ5VTD9 330 aa6.17□□□□□ -1.42
SMG6-216ENST00000575176 ZNF767PQ75MW2 155 aa6.17□□□□□ -1.42
SMG6-216ENST00000575176 EXOC3-AS1Q8N2X6 119 aa6.17□□□□□ -1.42
SMG6-216ENST00000575176 OR2G3Q8NGZ4 309 aa6.17□□□□□ -1.42
SMG6-216ENST00000575176 RNASE8Q8TDE3 154 aaKnown RBP6.17□□□□□ -1.42
SMG6-216ENST00000575176 ASB13Q8WXK3 278 aa6.17□□□□□ -1.42
SMG6-216ENST00000575176 ODF3Q96PU9 254 aa6.17□□□□□ -1.42
SMG6-216ENST00000575176 MED28Q9H204 178 aa6.17□□□□□ -1.42
SMG6-216ENST00000575176 SH3BGRL3Q9H299 93 aa6.17□□□□□ -1.42
SMG6-216ENST00000575176 APLNQ9ULZ1 77 aa6.17□□□□□ -1.42
SMG6-216ENST00000575176 TIMM9Q9Y5J7 89 aa6.17□□□□□ -1.42
SMG6-216ENST00000575176 DYNC1H1Q14204 4646 aaKnown RBP6.16□□□□□ -1.42
SMG6-216ENST00000575176 SMIM9A6NGZ8 99 aa6.16□□□□□ -1.42
SMG6-216ENST00000575176 KLLNB2CW77 178 aa6.16□□□□□ -1.42
SMG6-216ENST00000575176 INSP01308 110 aa6.16□□□□□ -1.42
SMG6-216ENST00000575176 AMBPP02760 352 aa6.16□□□□□ -1.42
SMG6-216ENST00000575176 OR10J4P0C629 311 aa6.16□□□□□ -1.42
SMG6-216ENST00000575176 TSPOP30536 169 aa6.16□□□□□ -1.42
SMG6-216ENST00000575176 FFAR4Q5NUL3 377 aa6.16□□□□□ -1.42
SMG6-216ENST00000575176 Q6ZQT7 251 aa6.16□□□□□ -1.42
SMG6-216ENST00000575176 RPP25LQ8N5L8 163 aaKnown RBP6.16□□□□□ -1.42
SMG6-216ENST00000575176 ZFAND2AQ8N6M9 145 aa6.16□□□□□ -1.42
SMG6-216ENST00000575176 OR11H4Q8NGC9 324 aa6.16□□□□□ -1.42
SMG6-216ENST00000575176 SUN5Q8TC36 379 aa6.16□□□□□ -1.42
SMG6-216ENST00000575176 CYTL1Q9NRR1 136 aa6.16□□□□□ -1.42
SMG6-216ENST00000575176 KCNIP2Q9NS61 270 aa6.16□□□□□ -1.42
SMG6-216ENST00000575176 RNF24Q9Y225 148 aa6.16□□□□□ -1.42
SMG6-216ENST00000575176 IGKV2-40A0A087WW87 121 aaPredicted RBP6.15□□□□□ -1.42
SMG6-216ENST00000575176 LOC102723971A0A1B0GUV8 181 aa6.15□□□□□ -1.42
SMG6-216ENST00000575176 SMLR1H3BR10 107 aa6.15□□□□□ -1.42
SMG6-216ENST00000575176 IGKV2D-40P01614 121 aaPredicted RBP6.15□□□□□ -1.42
SMG6-216ENST00000575176 CRISP2P16562 243 aa6.15□□□□□ -1.42
SMG6-216ENST00000575176 ATP6V0CP27449 155 aa6.15□□□□□ -1.42
SMG6-216ENST00000575176 CDKN1BP46527 198 aa6.15□□□□□ -1.42
SMG6-216ENST00000575176 ERCC8Q13216 396 aa6.15□□□□□ -1.42
SMG6-216ENST00000575176 ZNF726P1Q15940 193 aa6.15□□□□□ -1.42
SMG6-216ENST00000575176 FAM222AQ5U5X8 452 aa6.15□□□□□ -1.42
SMG6-216ENST00000575176 C9orf47Q6ZRZ4 202 aa6.15□□□□□ -1.42
SMG6-216ENST00000575176 S100A7AQ86SG5 101 aa6.15□□□□□ -1.42
SMG6-216ENST00000575176 LINC00612Q8N6U2 182 aa6.15□□□□□ -1.42
SMG6-216ENST00000575176 OR2T35Q8NGX2 323 aa6.15□□□□□ -1.42
SMG6-216ENST00000575176 PSMG3Q9BT73 122 aaPredicted RBP6.15□□□□□ -1.42
SMG6-216ENST00000575176 AGPAT4-IT1Q9H0P7 198 aa6.15□□□□□ -1.42
SMG6-216ENST00000575176 OR51M1Q9H341 326 aa6.15□□□□□ -1.42
SMG6-216ENST00000575176 PLA2G2EQ9NZK7 142 aa6.15□□□□□ -1.42
SMG6-216ENST00000575176 YTHDF2Q9Y5A9 579 aaKnown RBP6.15□□□□□ -1.42
SMG6-216ENST00000575176 IGHV3OR16-12A0A075B7B8 117 aa6.14□□□□□ -1.43
SMG6-216ENST00000575176 ZNF705GA8MUZ8 300 aaPredicted RBP6.14□□□□□ -1.43
SMG6-216ENST00000575176 ZNF324O75467 553 aaPredicted RBP6.14□□□□□ -1.43
SMG6-216ENST00000575176 NBEAP1P0C6P0 100 aa6.14□□□□□ -1.43
SMG6-216ENST00000575176 STAG3L2P0CL84 134 aa6.14□□□□□ -1.43
SMG6-216ENST00000575176 STAG3L3P0CL85 134 aa6.14□□□□□ -1.43
SMG6-216ENST00000575176 M6PRP20645 277 aa6.14□□□□□ -1.43
SMG6-216ENST00000575176 ICAM4Q14773 271 aa6.14□□□□□ -1.43
SMG6-216ENST00000575176 RPL7L1Q6DKI1 246 aaKnown RBP6.14□□□□□ -1.43
SMG6-216ENST00000575176 HSD17B11Q8NBQ5 300 aa6.14□□□□□ -1.43
SMG6-216ENST00000575176 C11orf72Q8NBR9 251 aa6.14□□□□□ -1.43
SMG6-216ENST00000575176 BLNKQ8WV28 456 aa6.14□□□□□ -1.43
SMG6-216ENST00000575176 VGLL1Q99990 258 aa6.14□□□□□ -1.43
SMG6-216ENST00000575176 PAXXQ9BUH6 204 aa6.14□□□□□ -1.43
SMG6-216ENST00000575176 GOLT1BQ9Y3E0 138 aa6.14□□□□□ -1.43
SMG6-216ENST00000575176 MUC4Q99102 2169 aa6.13□□□□□ -1.43
SMG6-216ENST00000575176 C11orf94C9JXX5 98 aa6.13□□□□□ -1.43
SMG6-216ENST00000575176 C17orf112F2Z3M2 114 aa6.13□□□□□ -1.43
SMG6-216ENST00000575176 UBE2L3P68036 154 aaKnown RBP6.13□□□□□ -1.43
SMG6-216ENST00000575176 CD300CQ08708 224 aa6.13□□□□□ -1.43
SMG6-216ENST00000575176 Q8TAT8 98 aa6.13□□□□□ -1.43
SMG6-216ENST00000575176 RNF141Q8WVD5 230 aa6.13□□□□□ -1.43
SMG6-216ENST00000575176 C20orf144Q9BQM9 153 aa6.13□□□□□ -1.43
SMG6-216ENST00000575176 Q9H3A6 140 aa6.13□□□□□ -1.43
SMG6-216ENST00000575176 PRELID1Q9Y255 219 aa6.13□□□□□ -1.43
SMG6-216ENST00000575176 IGHV4-4A0A075B6R2 117 aa6.12□□□□□ -1.43
SMG6-216ENST00000575176 FXYD6-FXYD2A0A087WZ82 144 aa6.12□□□□□ -1.43
SMG6-216ENST00000575176 TRAV10A0A0B4J240 114 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms