RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.77□□□□□ -1.33
RPAIN-215ENST00000575112 OR4A5Q8NH83 315 aa6.77□□□□□ -1.33
RPAIN-215ENST00000575112 KLK15Q9H2R5 256 aa6.77□□□□□ -1.33
RPAIN-215ENST00000575112 IGKV1D-37A0A075B6S9 117 aa6.77□□□□□ -1.33
RPAIN-215ENST00000575112 GAGE12BA1L429 117 aa6.77□□□□□ -1.33
RPAIN-215ENST00000575112 FCN3O75636 299 aa6.77□□□□□ -1.33
RPAIN-215ENST00000575112 IGFL3Q6UXB1 125 aa6.77□□□□□ -1.33
RPAIN-215ENST00000575112 OR5AN1Q8NGI8 311 aa6.77□□□□□ -1.33
RPAIN-215ENST00000575112 FXYD5Q96DB9 178 aa6.77□□□□□ -1.33
RPAIN-215ENST00000575112 CHRDL1Q9BU40 450 aa6.77□□□□□ -1.33
RPAIN-215ENST00000575112 PRRC2AP48634 2157 aaKnown RBP6.76□□□□□ -1.33
RPAIN-215ENST00000575112 LEPROTL1O95214 131 aa6.76□□□□□ -1.33
RPAIN-215ENST00000575112 TMEM155Q4W5P6 130 aa6.76□□□□□ -1.33
RPAIN-215ENST00000575112 S100A7AQ86SG5 101 aa6.76□□□□□ -1.33
RPAIN-215ENST00000575112 TMEM167AQ8TBQ9 72 aa6.76□□□□□ -1.33
RPAIN-215ENST00000575112 RAB37Q96AX2 223 aa6.76□□□□□ -1.33
RPAIN-215ENST00000575112 JMJD8Q96S16 334 aa6.76□□□□□ -1.33
RPAIN-215ENST00000575112 COL25A1Q9BXS0 654 aaPredicted RBP6.76□□□□□ -1.33
RPAIN-215ENST00000575112 NCOR1P1Q9H4R4 102 aa6.76□□□□□ -1.33
RPAIN-215ENST00000575112 FSTL3O95633 263 aa6.76□□□□□ -1.33
RPAIN-215ENST00000575112 CGB3P0DN86 165 aa6.76□□□□□ -1.33
RPAIN-215ENST00000575112 CGB7P0DN87 165 aa6.76□□□□□ -1.33
RPAIN-215ENST00000575112 DEFB1P60022 68 aa6.76□□□□□ -1.33
RPAIN-215ENST00000575112 BPIFA4PQ86YQ2 179 aa6.76□□□□□ -1.33
RPAIN-215ENST00000575112 PIP4P2Q8N4L2 257 aa6.76□□□□□ -1.33
RPAIN-215ENST00000575112 TTTY13Q9BZ97 58 aa6.76□□□□□ -1.33
RPAIN-215ENST00000575112 MEGF9Q9H1U4 602 aa6.76□□□□□ -1.33
RPAIN-215ENST00000575112 MRPL27Q9P0M9 148 aaKnown RBP6.76□□□□□ -1.33
RPAIN-215ENST00000575112 CEACAM3P40198 252 aa6.76□□□□□ -1.33
RPAIN-215ENST00000575112 TWIST1Q15672 202 aa6.76□□□□□ -1.33
RPAIN-215ENST00000575112 TRAV30A0A087WSZ9 112 aa6.75□□□□□ -1.33
RPAIN-215ENST00000575112 A0A1B0GXF2 115 aa6.75□□□□□ -1.33
RPAIN-215ENST00000575112 PRSS47A8MTI9 375 aa6.75□□□□□ -1.33
RPAIN-215ENST00000575112 GNLYP22749 145 aa6.75□□□□□ -1.33
RPAIN-215ENST00000575112 CFHR2P36980 270 aa6.75□□□□□ -1.33
RPAIN-215ENST00000575112 GATA4P43694 442 aa6.75□□□□□ -1.33
RPAIN-215ENST00000575112 HIST2H2BDQ6DRA6 164 aa6.75□□□□□ -1.33
RPAIN-215ENST00000575112 C2orf91Q6ZV80 131 aa6.75□□□□□ -1.33
RPAIN-215ENST00000575112 RNF182Q8N6D2 247 aa6.75□□□□□ -1.33
RPAIN-215ENST00000575112 VKORC1Q9BQB6 163 aa6.75□□□□□ -1.33
RPAIN-215ENST00000575112 SLC25A39Q9BZJ4 359 aaPredicted RBP6.75□□□□□ -1.33
RPAIN-215ENST00000575112 RABAC1Q9UI14 185 aa6.75□□□□□ -1.33
RPAIN-215ENST00000575112 UTP20O75691 2785 aaKnown RBP6.75□□□□□ -1.33
RPAIN-215ENST00000575112 A8MWL6 223 aa6.75□□□□□ -1.33
RPAIN-215ENST00000575112 BPESC1Q9GZL8 116 aa6.75□□□□□ -1.33
RPAIN-215ENST00000575112 CHODLQ9H9P2 273 aa6.75□□□□□ -1.33
RPAIN-215ENST00000575112 FAM231BA6NCW3 169 aa6.75□□□□□ -1.33
RPAIN-215ENST00000575112 FNDC10F2Z333 226 aa6.75□□□□□ -1.33
RPAIN-215ENST00000575112 K7ENP7 123 aa6.75□□□□□ -1.33
RPAIN-215ENST00000575112 CEACAM4O75871 244 aa6.75□□□□□ -1.33
RPAIN-215ENST00000575112 EVI2AP22794 236 aa6.75□□□□□ -1.33
RPAIN-215ENST00000575112 NMUP48645 174 aa6.75□□□□□ -1.33
RPAIN-215ENST00000575112 ERCC8Q13216 396 aa6.75□□□□□ -1.33
RPAIN-215ENST00000575112 ZNF833PQ6ZTB9 187 aa6.75□□□□□ -1.33
RPAIN-215ENST00000575112 VMO1Q7Z5L0 202 aa6.75□□□□□ -1.33
RPAIN-215ENST00000575112 DEFB125Q8N687 156 aa6.75□□□□□ -1.33
RPAIN-215ENST00000575112 CACNG8Q8WXS5 425 aa6.75□□□□□ -1.33
RPAIN-215ENST00000575112 GRAMD2BQ96HH9 432 aa6.75□□□□□ -1.33
RPAIN-215ENST00000575112 GPR82Q96P67 336 aa6.75□□□□□ -1.33
RPAIN-215ENST00000575112 SCRT2Q9NQ03 307 aa6.75□□□□□ -1.33
RPAIN-215ENST00000575112 SOX21Q9Y651 276 aaPredicted RBP6.75□□□□□ -1.33
RPAIN-215ENST00000575112 ITPR1Q14643 2758 aa6.74□□□□□ -1.33
RPAIN-215ENST00000575112 NBR2O15453 112 aa6.74□□□□□ -1.33
RPAIN-215ENST00000575112 PF4V1P10720 104 aa6.74□□□□□ -1.33
RPAIN-215ENST00000575112 SLC25A34Q6PIV7 304 aa6.74□□□□□ -1.33
RPAIN-215ENST00000575112 NUP37Q8NFH4 326 aa6.74□□□□□ -1.33
RPAIN-215ENST00000575112 RNF125Q96EQ8 232 aa6.74□□□□□ -1.33
RPAIN-215ENST00000575112 C8orf49Q96NF6 230 aa6.74□□□□□ -1.33
RPAIN-215ENST00000575112 THYN1Q9P016 225 aa6.74□□□□□ -1.33
RPAIN-215ENST00000575112 FLNBO75369 2602 aaKnown RBP6.74□□□□□ -1.33
RPAIN-215ENST00000575112 RHOGP84095 191 aa6.74□□□□□ -1.33
RPAIN-215ENST00000575112 KLF5Q13887 457 aaPredicted RBP6.74□□□□□ -1.33
RPAIN-215ENST00000575112 AGRNO00468 2067 aa6.74□□□□□ -1.33
RPAIN-215ENST00000575112 C21orf62Q9NYP8 219 aa6.74□□□□□ -1.33
RPAIN-215ENST00000575112 OVOL3O00110 214 aa6.73□□□□□ -1.33
RPAIN-215ENST00000575112 HLA-DRB1P01911 266 aa6.73□□□□□ -1.33
RPAIN-215ENST00000575112 ARMS2P0C7Q2 107 aa6.73□□□□□ -1.33
RPAIN-215ENST00000575112 TEX36Q5VZQ5 186 aa6.73□□□□□ -1.33
RPAIN-215ENST00000575112 ARPC1AQ92747 370 aa6.73□□□□□ -1.33
RPAIN-215ENST00000575112 F11RQ9Y624 299 aaKnown RBP6.73□□□□□ -1.33
RPAIN-215ENST00000575112 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.73□□□□□ -1.33
RPAIN-215ENST00000575112 C7orf71A4D174 169 aa6.73□□□□□ -1.33
RPAIN-215ENST00000575112 TCRAP04437 139 aa6.73□□□□□ -1.33
RPAIN-215ENST00000575112 MGPP08493 103 aa6.73□□□□□ -1.33
RPAIN-215ENST00000575112 MFAP4P55083 255 aa6.73□□□□□ -1.33
RPAIN-215ENST00000575112 HBBP68871 147 aa6.73□□□□□ -1.33
RPAIN-215ENST00000575112 KLRB1Q12918 225 aa6.73□□□□□ -1.33
RPAIN-215ENST00000575112 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.73□□□□□ -1.33
RPAIN-215ENST00000575112 TMEM213A2RRL7 107 aa6.73□□□□□ -1.33
RPAIN-215ENST00000575112 C11orf44Q8N8P7 122 aa6.73□□□□□ -1.33
RPAIN-215ENST00000575112 WIPF2Q8TF74 440 aaPredicted RBP6.73□□□□□ -1.33
RPAIN-215ENST00000575112 CSTL1Q9H114 145 aa6.73□□□□□ -1.33
RPAIN-215ENST00000575112 RPP21Q9H633 154 aaKnown RBP6.73□□□□□ -1.33
RPAIN-215ENST00000575112 ANKRD17O75179 2603 aaKnown RBP6.73□□□□□ -1.33
RPAIN-215ENST00000575112 HECTD1Q9ULT8 2610 aa6.72□□□□□ -1.33
RPAIN-215ENST00000575112 TMEM189A5PLL7 270 aa6.72□□□□□ -1.33
RPAIN-215ENST00000575112 LINC01548A6NM66 108 aa6.72□□□□□ -1.33
RPAIN-215ENST00000575112 FAM90A9PA6NNJ1 464 aa6.72□□□□□ -1.33
RPAIN-215ENST00000575112 APOHP02749 345 aaPredicted RBP6.72□□□□□ -1.33
RPAIN-215ENST00000575112 MRPL32Q9BYC8 188 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms