RNA–Protein interactions for RNA: ENST00000574163.1

NDE1-210, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-210ENST00000574163 ZFAND6Q6FIF0 208 aa7.08□□□□□ -1.28
NDE1-210ENST00000574163 MIR17HGQ75NE6 70 aa7.08□□□□□ -1.28
NDE1-210ENST00000574163 OR10J6PQ8NGY7 276 aa7.08□□□□□ -1.28
NDE1-210ENST00000574163 IGF2BP2-AS1Q96M15 143 aa7.08□□□□□ -1.28
NDE1-210ENST00000574163 ODF3Q96PU9 254 aa7.08□□□□□ -1.28
NDE1-210ENST00000574163 SLC35B3Q9H1N7 401 aa7.08□□□□□ -1.28
NDE1-210ENST00000574163 GOLT1BQ9Y3E0 138 aa7.08□□□□□ -1.28
NDE1-210ENST00000574163 KMT2CQ8NEZ4 4911 aaKnown RBP7.07□□□□□ -1.28
NDE1-210ENST00000574163 TEX48A0A1B0GUV7 120 aa7.07□□□□□ -1.28
NDE1-210ENST00000574163 TMEM189A5PLL7 270 aa7.07□□□□□ -1.28
NDE1-210ENST00000574163 OR7C2O60412 319 aa7.07□□□□□ -1.28
NDE1-210ENST00000574163 NDUFB4O95168 129 aa7.07□□□□□ -1.28
NDE1-210ENST00000574163 PYYP10082 97 aa7.07□□□□□ -1.28
NDE1-210ENST00000574163 Q5BKY6 102 aa7.07□□□□□ -1.28
NDE1-210ENST00000574163 PAXXQ9BUH6 204 aa7.07□□□□□ -1.28
NDE1-210ENST00000574163 OR51M1Q9H341 326 aa7.07□□□□□ -1.28
NDE1-210ENST00000574163 AAMDCQ9H7C9 122 aa7.07□□□□□ -1.28
NDE1-210ENST00000574163 RFNGQ9Y644 331 aa7.07□□□□□ -1.28
NDE1-210ENST00000574163 DYNC2H1Q8NCM8 4307 aaKnown RBP7.07□□□□□ -1.28
NDE1-210ENST00000574163 BORCS7-ASMTA0A0B4J1R7 106 aa7.06□□□□□ -1.28
NDE1-210ENST00000574163 CXorf65A6NEN9 183 aa7.06□□□□□ -1.28
NDE1-210ENST00000574163 NPIPB6E9PJ23 425 aa7.06□□□□□ -1.28
NDE1-210ENST00000574163 H3BTX0 84 aa7.06□□□□□ -1.28
NDE1-210ENST00000574163 TAAR5O14804 337 aa7.06□□□□□ -1.28
NDE1-210ENST00000574163 MBP02144 154 aa7.06□□□□□ -1.28
NDE1-210ENST00000574163 NBEAP1P0C6P0 100 aa7.06□□□□□ -1.28
NDE1-210ENST00000574163 RBMY1A1P0DJD3 496 aaKnown RBP7.06□□□□□ -1.28
NDE1-210ENST00000574163 RBMY1CP0DJD4 496 aa7.06□□□□□ -1.28
NDE1-210ENST00000574163 TSPOP30536 169 aa7.06□□□□□ -1.28
NDE1-210ENST00000574163 FXYD7P58549 80 aa7.06□□□□□ -1.28
NDE1-210ENST00000574163 UBE2L3P68036 154 aaKnown RBP7.06□□□□□ -1.28
NDE1-210ENST00000574163 SERF2P84101 59 aa7.06□□□□□ -1.28
NDE1-210ENST00000574163 RBMY1FQ15415 496 aaKnown RBP7.06□□□□□ -1.28
NDE1-210ENST00000574163 PQLC2Q6ZP29 291 aa7.06□□□□□ -1.28
NDE1-210ENST00000574163 LYPD1Q8N2G4 141 aa7.06□□□□□ -1.28
NDE1-210ENST00000574163 TMEM256Q8N2U0 113 aa7.06□□□□□ -1.28
NDE1-210ENST00000574163 C11orf45Q8TAV5 145 aa7.06□□□□□ -1.28
NDE1-210ENST00000574163 RNF141Q8WVD5 230 aa7.06□□□□□ -1.28
NDE1-210ENST00000574163 FXYD5Q96DB9 178 aa7.06□□□□□ -1.28
NDE1-210ENST00000574163 GNPNAT1Q96EK6 184 aaPredicted RBP7.06□□□□□ -1.28
NDE1-210ENST00000574163 C20orf144Q9BQM9 153 aa7.06□□□□□ -1.28
NDE1-210ENST00000574163 M0R2Z0 102 aa7.05□□□□□ -1.28
NDE1-210ENST00000574163 CRXO43186 299 aaPredicted RBP7.05□□□□□ -1.28
NDE1-210ENST00000574163 HBE1P02100 147 aa7.05□□□□□ -1.28
NDE1-210ENST00000574163 SNRPCP09234 159 aaKnown RBP7.05□□□□□ -1.28
NDE1-210ENST00000574163 ATP6V0CP27449 155 aa7.05□□□□□ -1.28
NDE1-210ENST00000574163 CDKN1BP46527 198 aa7.05□□□□□ -1.28
NDE1-210ENST00000574163 PMS2P11Q13670 270 aa7.05□□□□□ -1.28
NDE1-210ENST00000574163 ZNF345Q14585 488 aa7.05□□□□□ -1.28
NDE1-210ENST00000574163 SPINK13Q1W4C9 94 aa7.05□□□□□ -1.28
NDE1-210ENST00000574163 C1orf158Q8N1D5 194 aa7.05□□□□□ -1.28
NDE1-210ENST00000574163 HSD17B11Q8NBQ5 300 aa7.05□□□□□ -1.28
NDE1-210ENST00000574163 PPP1R14DQ9NXH3 145 aa7.05□□□□□ -1.28
NDE1-210ENST00000574163 A0A1W2PPV4 95 aa7.04□□□□□ -1.28
NDE1-210ENST00000574163 PRAC2D3DTV9 90 aa7.04□□□□□ -1.28
NDE1-210ENST00000574163 M0R3E3 92 aa7.04□□□□□ -1.28
NDE1-210ENST00000574163 DEFB4AO15263 64 aa7.04□□□□□ -1.28
NDE1-210ENST00000574163 JTBO76095 146 aa7.04□□□□□ -1.28
NDE1-210ENST00000574163 OR10J4P0C629 311 aa7.04□□□□□ -1.28
NDE1-210ENST00000574163 LEPP41159 167 aa7.04□□□□□ -1.28
NDE1-210ENST00000574163 CDC34P49427 236 aaPredicted RBP7.04□□□□□ -1.28
NDE1-210ENST00000574163 RAB2AP61019 212 aa7.04□□□□□ -1.28
NDE1-210ENST00000574163 RRN3P1Q2M238 152 aa7.04□□□□□ -1.28
NDE1-210ENST00000574163 CEMP1Q6PRD7 247 aaPredicted RBP7.04□□□□□ -1.28
NDE1-210ENST00000574163 BAP18Q8IXM2 172 aa7.04□□□□□ -1.28
NDE1-210ENST00000574163 BLNKQ8WV28 456 aa7.04□□□□□ -1.28
NDE1-210ENST00000574163 ZNF503Q96F45 646 aa7.04□□□□□ -1.28
NDE1-210ENST00000574163 PHYHIPLQ96FC7 376 aa7.04□□□□□ -1.28
NDE1-210ENST00000574163 TMEM208Q9BTX3 173 aa7.04□□□□□ -1.28
NDE1-210ENST00000574163 MRPL18Q9H0U6 180 aaKnown RBP7.04□□□□□ -1.28
NDE1-210ENST00000574163 KLK5Q9Y337 293 aaPredicted RBP7.04□□□□□ -1.28
NDE1-210ENST00000574163 ALMS1Q8TCU4 4167 aa7.03□□□□□ -1.28
NDE1-210ENST00000574163 IGHV3OR16-12A0A075B7B8 117 aa7.03□□□□□ -1.28
NDE1-210ENST00000574163 TRBV7-9A0A0J9YWB2 115 aa7.03□□□□□ -1.28
NDE1-210ENST00000574163 LCE6AA0A183 80 aa7.03□□□□□ -1.28
NDE1-210ENST00000574163 RBAKDNA6NC62 111 aa7.03□□□□□ -1.28
NDE1-210ENST00000574163 HMSDA8MTL9 139 aa7.03□□□□□ -1.28
NDE1-210ENST00000574163 C11orf94C9JXX5 98 aa7.03□□□□□ -1.28
NDE1-210ENST00000574163 ARPC5O15511 151 aa7.03□□□□□ -1.28
NDE1-210ENST00000574163 NANOS2P60321 138 aaKnown RBP7.03□□□□□ -1.28
NDE1-210ENST00000574163 ICAM4Q14773 271 aa7.03□□□□□ -1.28
NDE1-210ENST00000574163 RPL7L1Q6DKI1 246 aaKnown RBP7.03□□□□□ -1.28
NDE1-210ENST00000574163 FAM122CQ6P4D5 195 aa7.03□□□□□ -1.28
NDE1-210ENST00000574163 C9orf47Q6ZRZ4 202 aa7.03□□□□□ -1.28
NDE1-210ENST00000574163 EXOC3-AS1Q8N2X6 119 aa7.03□□□□□ -1.28
NDE1-210ENST00000574163 ARL6IP6Q8N6S5 226 aa7.03□□□□□ -1.28
NDE1-210ENST00000574163 OR10G4Q8NGN3 311 aa7.03□□□□□ -1.28
NDE1-210ENST00000574163 OR10G9Q8NGN4 311 aa7.03□□□□□ -1.28
NDE1-210ENST00000574163 OR10G7Q8NGN6 311 aa7.03□□□□□ -1.28
NDE1-210ENST00000574163 PHLDA1Q8WV24 401 aaPredicted RBP7.03□□□□□ -1.28
NDE1-210ENST00000574163 LINC00477Q96M19 166 aa7.03□□□□□ -1.28
NDE1-210ENST00000574163 SH3BGRL3Q9H299 93 aa7.03□□□□□ -1.28
NDE1-210ENST00000574163 LYSTQ99698 3801 aa7.03□□□□□ -1.28
NDE1-210ENST00000574163 LOC102723971A0A1B0GUV8 181 aa7.02□□□□□ -1.29
NDE1-210ENST00000574163 SLC25A5P05141 298 aaKnown RBP7.02□□□□□ -1.29
NDE1-210ENST00000574163 NMBP08949 121 aa7.02□□□□□ -1.29
NDE1-210ENST00000574163 STAG3L2P0CL84 134 aa7.02□□□□□ -1.29
NDE1-210ENST00000574163 STAG3L3P0CL85 134 aa7.02□□□□□ -1.29
NDE1-210ENST00000574163 ARL14EPLP0DKL9 152 aa7.02□□□□□ -1.29
NDE1-210ENST00000574163 CRISP2P16562 243 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms