RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 CKS1BP61024 79 aa9.95□□□□□ -0.82
PCDHGA9-201ENST00000573521 NDUFA4O00483 81 aa9.95□□□□□ -0.82
PCDHGA9-201ENST00000573521 F8VRH5 84 aa9.95□□□□□ -0.82
PCDHGA9-201ENST00000573521 LEPROTO15243 131 aa9.95□□□□□ -0.82
PCDHGA9-201ENST00000573521 INSP01308 110 aa9.95□□□□□ -0.82
PCDHGA9-201ENST00000573521 RNF166Q96A37 237 aaPredicted RBP9.95□□□□□ -0.82
PCDHGA9-201ENST00000573521 COL4A6Q14031 1691 aa9.95□□□□□ -0.82
PCDHGA9-201ENST00000573521 IGHV1-69DA0A0B4J2H0 117 aa9.95□□□□□ -0.82
PCDHGA9-201ENST00000573521 A0A0G2JNJ9 132 aa9.95□□□□□ -0.82
PCDHGA9-201ENST00000573521 TRBV6-1A0A0K0K1D8 114 aa9.95□□□□□ -0.82
PCDHGA9-201ENST00000573521 IGHV3-11P01762 117 aa9.95□□□□□ -0.82
PCDHGA9-201ENST00000573521 UTF1Q5T230 341 aa9.95□□□□□ -0.82
PCDHGA9-201ENST00000573521 FXYD5Q96DB9 178 aa9.95□□□□□ -0.82
PCDHGA9-201ENST00000573521 Q9UFV3 132 aa9.95□□□□□ -0.82
PCDHGA9-201ENST00000573521 ESPL1Q14674 2120 aa9.95□□□□□ -0.82
PCDHGA9-201ENST00000573521 HLA-DRB4P13762 266 aa9.94□□□□□ -0.82
PCDHGA9-201ENST00000573521 ADAMTSL5Q6ZMM2 481 aa9.94□□□□□ -0.82
PCDHGA9-201ENST00000573521 IGFBPL1Q8WX77 278 aa9.94□□□□□ -0.82
PCDHGA9-201ENST00000573521 HLA-DRB4X5D2U9 266 aa9.94□□□□□ -0.82
PCDHGA9-201ENST00000573521 COL4A4P53420 1690 aaPredicted RBP9.94□□□□□ -0.82
PCDHGA9-201ENST00000573521 TGFAP01135 160 aa9.94□□□□□ -0.82
PCDHGA9-201ENST00000573521 IGHV4-39P01824 125 aa9.94□□□□□ -0.82
PCDHGA9-201ENST00000573521 TOMM7Q9P0U1 55 aa9.94□□□□□ -0.82
PCDHGA9-201ENST00000573521 TRGV4A0A0C4DH28 118 aa9.94□□□□□ -0.82
PCDHGA9-201ENST00000573521 IGLL1P15814 213 aa9.94□□□□□ -0.82
PCDHGA9-201ENST00000573521 MALP21145 153 aa9.94□□□□□ -0.82
PCDHGA9-201ENST00000573521 CDKN1AP38936 164 aa9.94□□□□□ -0.82
PCDHGA9-201ENST00000573521 ZNF493Q6ZR52 646 aa9.94□□□□□ -0.82
PCDHGA9-201ENST00000573521 TFF1P04155 84 aa9.93□□□□□ -0.82
PCDHGA9-201ENST00000573521 SFTA2Q6UW10 78 aa9.93□□□□□ -0.82
PCDHGA9-201ENST00000573521 IGLC1P0CG04 106 aa9.93□□□□□ -0.82
PCDHGA9-201ENST00000573521 C2orf66Q6UXQ4 117 aa9.93□□□□□ -0.82
PCDHGA9-201ENST00000573521 Q6ZR03 302 aa9.93□□□□□ -0.82
PCDHGA9-201ENST00000573521 CITED1Q99966 193 aa9.93□□□□□ -0.82
PCDHGA9-201ENST00000573521 DKK1O94907 266 aa9.93□□□□□ -0.82
PCDHGA9-201ENST00000573521 PPIFP30405 207 aaKnown RBP9.93□□□□□ -0.82
PCDHGA9-201ENST00000573521 RIPPLY3P57055 190 aa9.93□□□□□ -0.82
PCDHGA9-201ENST00000573521 MRPL51Q4U2R6 128 aaKnown RBP9.93□□□□□ -0.82
PCDHGA9-201ENST00000573521 WDR86Q86TI4 376 aa9.93□□□□□ -0.82
PCDHGA9-201ENST00000573521 HS3ST6Q96QI5 342 aa9.93□□□□□ -0.82
PCDHGA9-201ENST00000573521 TRAV8-1A0A0A6YYK1 113 aa9.92□□□□□ -0.82
PCDHGA9-201ENST00000573521 K7EP13 123 aa9.92□□□□□ -0.82
PCDHGA9-201ENST00000573521 SMIM2Q9BVW6 85 aa9.92□□□□□ -0.82
PCDHGA9-201ENST00000573521 RHPN1-AS1Q9BWJ2 59 aa9.92□□□□□ -0.82
PCDHGA9-201ENST00000573521 LY6G6EA0A0G2JKS1 128 aa9.92□□□□□ -0.82
PCDHGA9-201ENST00000573521 LOXP28300 417 aaPredicted RBP9.92□□□□□ -0.82
PCDHGA9-201ENST00000573521 U3KQA8 63 aa9.92□□□□□ -0.82
PCDHGA9-201ENST00000573521 ANAPC1Q9H1A4 1944 aa9.92□□□□□ -0.82
PCDHGA9-201ENST00000573521 RHOHQ15669 191 aa9.92□□□□□ -0.82
PCDHGA9-201ENST00000573521 KLF12Q9Y4X4 402 aa9.92□□□□□ -0.82
PCDHGA9-201ENST00000573521 LAMA2P24043 3122 aaKnown RBP9.91□□□□□ -0.82
PCDHGA9-201ENST00000573521 THADAQ6YHU6 1953 aa9.91□□□□□ -0.82
PCDHGA9-201ENST00000573521 I3L3M4 83 aa9.91□□□□□ -0.82
PCDHGA9-201ENST00000573521 ZNF688P0C7X2 276 aa9.91□□□□□ -0.82
PCDHGA9-201ENST00000573521 ERCC8Q13216 396 aa9.91□□□□□ -0.82
PCDHGA9-201ENST00000573521 BVES-AS1Q5T3Y7 98 aa9.91□□□□□ -0.82
PCDHGA9-201ENST00000573521 CYYR1Q96J86 154 aa9.91□□□□□ -0.82
PCDHGA9-201ENST00000573521 TRAV40A0A0B4J280 105 aa9.91□□□□□ -0.82
PCDHGA9-201ENST00000573521 A0A1W2PPM0 123 aa9.91□□□□□ -0.82
PCDHGA9-201ENST00000573521 TMEM95Q3KNT9 176 aa9.91□□□□□ -0.82
PCDHGA9-201ENST00000573521 DEFB125Q8N687 156 aa9.91□□□□□ -0.82
PCDHGA9-201ENST00000573521 MKI67P46013 3256 aaKnown RBP9.91□□□□□ -0.82
PCDHGA9-201ENST00000573521 NUP210Q8TEM1 1887 aaPredicted RBP9.91□□□□□ -0.82
PCDHGA9-201ENST00000573521 WT1-ASQ06250 92 aa9.91□□□□□ -0.82
PCDHGA9-201ENST00000573521 IGF2-ASQ6U949 168 aa9.91□□□□□ -0.82
PCDHGA9-201ENST00000573521 C14orf178Q8N769 122 aaPredicted RBP9.91□□□□□ -0.82
PCDHGA9-201ENST00000573521 PHLDA1Q8WV24 401 aaPredicted RBP9.91□□□□□ -0.82
PCDHGA9-201ENST00000573521 IGLC7A0M8Q6 106 aa9.9□□□□□ -0.82
PCDHGA9-201ENST00000573521 SPINK8P0C7L1 97 aa9.9□□□□□ -0.82
PCDHGA9-201ENST00000573521 HLA-DMBP28068 263 aa9.9□□□□□ -0.82
PCDHGA9-201ENST00000573521 RNASE1P07998 156 aaKnown RBP9.9□□□□□ -0.82
PCDHGA9-201ENST00000573521 SPXQ9BT56 116 aa9.9□□□□□ -0.82
PCDHGA9-201ENST00000573521 ZNF747Q9BV97 191 aa9.9□□□□□ -0.82
PCDHGA9-201ENST00000573521 IGHV3OR16-10A0A075B7F0 116 aa9.9□□□□□ -0.83
PCDHGA9-201ENST00000573521 E7EQL1 145 aa9.9□□□□□ -0.83
PCDHGA9-201ENST00000573521 J3QLI3 93 aa9.9□□□□□ -0.83
PCDHGA9-201ENST00000573521 CDKN1BP46527 198 aa9.9□□□□□ -0.83
PCDHGA9-201ENST00000573521 LINC00479Q96M42 142 aa9.9□□□□□ -0.83
PCDHGA9-201ENST00000573521 SIGLEC8Q9NYZ4 499 aa9.9□□□□□ -0.83
PCDHGA9-201ENST00000573521 ICE1Q9Y2F5 2266 aa9.89□□□□□ -0.83
PCDHGA9-201ENST00000573521 IGHV3OR16-8A0A075B7F1 116 aa9.89□□□□□ -0.83
PCDHGA9-201ENST00000573521 HIGD1BQ9P298 99 aa9.89□□□□□ -0.83
PCDHGA9-201ENST00000573521 A0A087WX48 190 aa9.89□□□□□ -0.83
PCDHGA9-201ENST00000573521 LINC00158P58513 81 aa9.89□□□□□ -0.83
PCDHGA9-201ENST00000573521 CEND1Q8N111 149 aa9.89□□□□□ -0.83
PCDHGA9-201ENST00000573521 Q8TAT8 98 aa9.89□□□□□ -0.83
PCDHGA9-201ENST00000573521 Q6ZVH6 145 aa9.89□□□□□ -0.83
PCDHGA9-201ENST00000573521 CHCHD5Q9BSY4 110 aa9.89□□□□□ -0.83
PCDHGA9-201ENST00000573521 IGKV3OR2-268A0A0C4DH90 116 aa9.89□□□□□ -0.83
PCDHGA9-201ENST00000573521 MPDZO75970 2070 aa9.89□□□□□ -0.83
PCDHGA9-201ENST00000573521 APC2O95996 2303 aa9.89□□□□□ -0.83
PCDHGA9-201ENST00000573521 GLMPQ8WWB7 406 aa9.88□□□□□ -0.83
PCDHGA9-201ENST00000573521 H3BMM0 161 aa9.88□□□□□ -0.83
PCDHGA9-201ENST00000573521 ACYP1P07311 99 aa9.88□□□□□ -0.83
PCDHGA9-201ENST00000573521 Q5PR19 223 aa9.88□□□□□ -0.83
PCDHGA9-201ENST00000573521 UBE2WQ96B02 151 aa9.88□□□□□ -0.83
PCDHGA9-201ENST00000573521 PRO1854Q9UHT4 67 aa9.88□□□□□ -0.83
PCDHGA9-201ENST00000573521 HEATR5AQ86XA9 2040 aa9.88□□□□□ -0.83
PCDHGA9-201ENST00000573521 LYPD2Q6UXB3 125 aa9.88□□□□□ -0.83
PCDHGA9-201ENST00000573521 PI4KAP42356 2102 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms