RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 PET100P0DJ07 73 aa12.3□□□□□ -0.44
SMG6-212ENST00000573153 LRRC37A5PQ49AS3 106 aa12.3□□□□□ -0.44
SMG6-212ENST00000573153 FAM222AQ5U5X8 452 aa12.3□□□□□ -0.44
SMG6-212ENST00000573153 TMEM256Q8N2U0 113 aa12.3□□□□□ -0.44
SMG6-212ENST00000573153 MPC2O95563 127 aa12.29□□□□□ -0.44
SMG6-212ENST00000573153 PDE6HQ13956 83 aa12.29□□□□□ -0.44
SMG6-212ENST00000573153 BAP18Q8IXM2 172 aa12.29□□□□□ -0.44
SMG6-212ENST00000573153 MRPL53Q96EL3 112 aaKnown RBP12.29□□□□□ -0.44
SMG6-212ENST00000573153 WDR61Q9GZS3 305 aaKnown RBP12.29□□□□□ -0.44
SMG6-212ENST00000573153 KCNIP2Q9NS61 270 aa12.29□□□□□ -0.44
SMG6-212ENST00000573153 ZNF586Q9NXT0 402 aa12.29□□□□□ -0.44
SMG6-212ENST00000573153 YTHDF2Q9Y5A9 579 aaKnown RBP12.29□□□□□ -0.44
SMG6-212ENST00000573153 TRBV19A0A075B6N1 114 aa12.28□□□□□ -0.44
SMG6-212ENST00000573153 SNRPCP09234 159 aaKnown RBP12.28□□□□□ -0.44
SMG6-212ENST00000573153 CDKN1BP46527 198 aa12.28□□□□□ -0.44
SMG6-212ENST00000573153 EMP1P54849 157 aa12.28□□□□□ -0.44
SMG6-212ENST00000573153 RHOBP62745 196 aa12.28□□□□□ -0.44
SMG6-212ENST00000573153 THAP6Q8TBB0 222 aa12.28□□□□□ -0.44
SMG6-212ENST00000573153 FAM210BQ96KR6 192 aa12.28□□□□□ -0.44
SMG6-212ENST00000573153 ODF3Q96PU9 254 aa12.28□□□□□ -0.44
SMG6-212ENST00000573153 NIPSNAP3BQ9BS92 247 aa12.28□□□□□ -0.44
SMG6-212ENST00000573153 TMEM208Q9BTX3 173 aa12.28□□□□□ -0.44
SMG6-212ENST00000573153 PRAC2D3DTV9 90 aa12.27□□□□□ -0.45
SMG6-212ENST00000573153 H3BTX0 84 aa12.27□□□□□ -0.45
SMG6-212ENST00000573153 PTTG1O95997 202 aa12.27□□□□□ -0.45
SMG6-212ENST00000573153 HIST1H1EP10412 219 aaKnown RBP12.27□□□□□ -0.45
SMG6-212ENST00000573153 CLINT1Q14677 625 aa12.27□□□□□ -0.45
SMG6-212ENST00000573153 ATP5SQ99766 215 aa12.27□□□□□ -0.45
SMG6-212ENST00000573153 C20orf144Q9BQM9 153 aa12.27□□□□□ -0.45
SMG6-212ENST00000573153 HSPB11Q9Y547 144 aa12.27□□□□□ -0.45
SMG6-212ENST00000573153 TRAV12-2A0A075B6T6 113 aa12.26□□□□□ -0.45
SMG6-212ENST00000573153 NPIPB6E9PJ23 425 aa12.26□□□□□ -0.45
SMG6-212ENST00000573153 NDUFB4O95168 129 aa12.26□□□□□ -0.45
SMG6-212ENST00000573153 KIR3DS1Q14943 382 aa12.26□□□□□ -0.45
SMG6-212ENST00000573153 GCSAMLQ5JQS6 135 aa12.26□□□□□ -0.45
SMG6-212ENST00000573153 OR10J6PQ8NGY7 276 aa12.26□□□□□ -0.45
SMG6-212ENST00000573153 FAM167A-AS1Q96KT0 104 aa12.26□□□□□ -0.45
SMG6-212ENST00000573153 SLC25A2Q9BXI2 301 aa12.26□□□□□ -0.45
SMG6-212ENST00000573153 PPP1R14DQ9NXH3 145 aa12.26□□□□□ -0.45
SMG6-212ENST00000573153 KIAA1109Q2LD37 5005 aa12.26□□□□□ -0.45
SMG6-212ENST00000573153 LYRM9A8MSI8 78 aa12.25□□□□□ -0.45
SMG6-212ENST00000573153 ZNF705GA8MUZ8 300 aaPredicted RBP12.25□□□□□ -0.45
SMG6-212ENST00000573153 AZU1P20160 251 aa12.25□□□□□ -0.45
SMG6-212ENST00000573153 TAS2R60P59551 318 aa12.25□□□□□ -0.45
SMG6-212ENST00000573153 MRPL32Q9BYC8 188 aaKnown RBP12.25□□□□□ -0.45
SMG6-212ENST00000573153 PARD6GQ9BYG4 376 aaPredicted RBP12.25□□□□□ -0.45
SMG6-212ENST00000573153 PRELID1Q9Y255 219 aa12.25□□□□□ -0.45
SMG6-212ENST00000573153 C17orf112F2Z3M2 114 aa12.24□□□□□ -0.45
SMG6-212ENST00000573153 RPL12P30050 165 aaKnown RBP12.24□□□□□ -0.45
SMG6-212ENST00000573153 DNAH11Q96DT5 4516 aa12.24□□□□□ -0.45
SMG6-212ENST00000573153 NDUFAF3Q9BU61 184 aa12.24□□□□□ -0.45
SMG6-212ENST00000573153 MBD2Q9UBB5 411 aa12.24□□□□□ -0.45
SMG6-212ENST00000573153 ALG5Q9Y673 324 aa12.24□□□□□ -0.45
SMG6-212ENST00000573153 PKHD1P08F94 4074 aa12.23□□□□□ -0.45
SMG6-212ENST00000573153 PYYP10082 97 aa12.23□□□□□ -0.45
SMG6-212ENST00000573153 H7BYZ3 331 aa12.22□□□□□ -0.45
SMG6-212ENST00000573153 CT45A10P0DMU9 189 aa12.22□□□□□ -0.45
SMG6-212ENST00000573153 ZNF493Q6ZR52 646 aa12.22□□□□□ -0.45
SMG6-212ENST00000573153 MIR17HGQ75NE6 70 aa12.22□□□□□ -0.45
SMG6-212ENST00000573153 C16orf74Q96GX8 76 aa12.22□□□□□ -0.45
SMG6-212ENST00000573153 LINC01587Q99440 93 aa12.22□□□□□ -0.45
SMG6-212ENST00000573153 FUT9Q9Y231 359 aa12.22□□□□□ -0.45
SMG6-212ENST00000573153 TIMM9Q9Y5J7 89 aa12.22□□□□□ -0.45
SMG6-212ENST00000573153 PKD1P98161 4303 aa12.22□□□□□ -0.45
SMG6-212ENST00000573153 LEPP41159 167 aa12.21□□□□□ -0.45
SMG6-212ENST00000573153 DAD1P61803 113 aa12.21□□□□□ -0.45
SMG6-212ENST00000573153 GFI1BQ5VTD9 330 aa12.21□□□□□ -0.45
SMG6-212ENST00000573153 RNASE8Q8TDE3 154 aaKnown RBP12.21□□□□□ -0.45
SMG6-212ENST00000573153 FAM19A4Q96LR4 140 aa12.21□□□□□ -0.45
SMG6-212ENST00000573153 OR51M1Q9H341 326 aa12.21□□□□□ -0.45
SMG6-212ENST00000573153 M0R3E3 92 aa12.2□□□□□ -0.46
SMG6-212ENST00000573153 IFNA5P01569 189 aa12.2□□□□□ -0.46
SMG6-212ENST00000573153 NBEAP1P0C6P0 100 aa12.2□□□□□ -0.46
SMG6-212ENST00000573153 P0DMU3 169 aa12.2□□□□□ -0.46
SMG6-212ENST00000573153 FAM231AP0DMU4 169 aa12.2□□□□□ -0.46
SMG6-212ENST00000573153 FAM231CP0DMU5 169 aa12.2□□□□□ -0.46
SMG6-212ENST00000573153 POM121L12Q8N7R1 296 aa12.2□□□□□ -0.46
SMG6-212ENST00000573153 TMEM263Q8WUH6 116 aaKnown RBP12.2□□□□□ -0.46
SMG6-212ENST00000573153 FXYD5Q96DB9 178 aa12.2□□□□□ -0.46
SMG6-212ENST00000573153 LINC00477Q96M19 166 aa12.2□□□□□ -0.46
SMG6-212ENST00000573153 NACAE9PAV3 2078 aa12.19□□□□□ -0.46
SMG6-212ENST00000573153 C9orf47Q6ZRZ4 202 aa12.19□□□□□ -0.46
SMG6-212ENST00000573153 ASB13Q8WXK3 278 aa12.19□□□□□ -0.46
SMG6-212ENST00000573153 PAXXQ9BUH6 204 aa12.19□□□□□ -0.46
SMG6-212ENST00000573153 AAMDCQ9H7C9 122 aa12.19□□□□□ -0.46
SMG6-212ENST00000573153 KLLNB2CW77 178 aa12.18□□□□□ -0.46
SMG6-212ENST00000573153 NMBP08949 121 aa12.18□□□□□ -0.46
SMG6-212ENST00000573153 FCN2Q15485 313 aa12.18□□□□□ -0.46
SMG6-212ENST00000573153 FFAR4Q5NUL3 377 aa12.18□□□□□ -0.46
SMG6-212ENST00000573153 TMEM88Q6PEY1 159 aa12.18□□□□□ -0.46
SMG6-212ENST00000573153 LYPD1Q8N2G4 141 aa12.18□□□□□ -0.46
SMG6-212ENST00000573153 EXOC3-AS1Q8N2X6 119 aa12.18□□□□□ -0.46
SMG6-212ENST00000573153 SCGB1C1Q8TD33 95 aa12.18□□□□□ -0.46
SMG6-212ENST00000573153 BLNKQ8WV28 456 aa12.18□□□□□ -0.46
SMG6-212ENST00000573153 RNF141Q8WVD5 230 aa12.18□□□□□ -0.46
SMG6-212ENST00000573153 ZNF503Q96F45 646 aa12.18□□□□□ -0.46
SMG6-212ENST00000573153 WFDC1Q9HC57 220 aa12.18□□□□□ -0.46
SMG6-212ENST00000573153 TIMM8BQ9Y5J9 83 aaPredicted RBP12.18□□□□□ -0.46
SMG6-212ENST00000573153 A0A1B0GVY2 172 aa12.17□□□□□ -0.46
SMG6-212ENST00000573153 SLC25A5P05141 298 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms