RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 ZNF705FA8MVS1 300 aaPredicted RBP9.76□□□□□ -0.85
CCDC40-205ENST00000571028 NBEAP1P0C6P0 100 aa9.76□□□□□ -0.85
CCDC40-205ENST00000571028 TPT1P13693 172 aaKnown RBP9.76□□□□□ -0.85
CCDC40-205ENST00000571028 PSG3Q16557 428 aa9.76□□□□□ -0.85
CCDC40-205ENST00000571028 GDF5OSQ5U4N7 250 aa9.76□□□□□ -0.85
CCDC40-205ENST00000571028 BAP18Q8IXM2 172 aa9.76□□□□□ -0.85
CCDC40-205ENST00000571028 C9orf62Q8N4C0 152 aa9.76□□□□□ -0.85
CCDC40-205ENST00000571028 RAB24Q969Q5 203 aa9.76□□□□□ -0.85
CCDC40-205ENST00000571028 ZNF503Q96F45 646 aa9.76□□□□□ -0.85
CCDC40-205ENST00000571028 SLC50A1Q9BRV3 221 aa9.76□□□□□ -0.85
CCDC40-205ENST00000571028 ACTR3CQ9C0K3 210 aaPredicted RBP9.76□□□□□ -0.85
CCDC40-205ENST00000571028 RYR1P21817 5038 aa9.75□□□□□ -0.85
CCDC40-205ENST00000571028 APOC4P55056 127 aa9.75□□□□□ -0.85
CCDC40-205ENST00000571028 FXYD7P58549 80 aa9.75□□□□□ -0.85
CCDC40-205ENST00000571028 GUK1Q16774 197 aa9.75□□□□□ -0.85
CCDC40-205ENST00000571028 EXOC3-AS1Q8N2X6 119 aa9.75□□□□□ -0.85
CCDC40-205ENST00000571028 TMED6Q8WW62 240 aa9.75□□□□□ -0.85
CCDC40-205ENST00000571028 FXYD5Q96DB9 178 aa9.75□□□□□ -0.85
CCDC40-205ENST00000571028 SAT2Q96F10 170 aaPredicted RBP9.75□□□□□ -0.85
CCDC40-205ENST00000571028 HECTD4Q9Y4D8 3996 aa9.74□□□□□ -0.85
CCDC40-205ENST00000571028 H3BMM0 161 aa9.74□□□□□ -0.85
CCDC40-205ENST00000571028 NDUFB4O95168 129 aa9.74□□□□□ -0.85
CCDC40-205ENST00000571028 ARL14EPLP0DKL9 152 aa9.74□□□□□ -0.85
CCDC40-205ENST00000571028 FGF8P55075 233 aaPredicted RBP9.74□□□□□ -0.85
CCDC40-205ENST00000571028 RANP62826 216 aaKnown RBP9.74□□□□□ -0.85
CCDC40-205ENST00000571028 HIST1H1AQ02539 215 aaPredicted RBP9.74□□□□□ -0.85
CCDC40-205ENST00000571028 FOXI2Q6ZQN5 318 aa9.74□□□□□ -0.85
CCDC40-205ENST00000571028 SSX7Q7RTT5 188 aa9.74□□□□□ -0.85
CCDC40-205ENST00000571028 TRPT1Q86TN4 253 aaKnown RBP9.74□□□□□ -0.85
CCDC40-205ENST00000571028 FAM213BQ8TBF2 198 aa9.74□□□□□ -0.85
CCDC40-205ENST00000571028 RPUSD4Q96CM3 377 aaKnown RBP9.74□□□□□ -0.85
CCDC40-205ENST00000571028 PHYHIPLQ96FC7 376 aa9.74□□□□□ -0.85
CCDC40-205ENST00000571028 SAV1Q9H4B6 383 aaPredicted RBP9.74□□□□□ -0.85
CCDC40-205ENST00000571028 PLA2G2EQ9NZK7 142 aa9.74□□□□□ -0.85
CCDC40-205ENST00000571028 A0A0J9YWU9 116 aa9.73□□□□□ -0.85
CCDC40-205ENST00000571028 A0A0J9YX75 114 aa9.73□□□□□ -0.85
CCDC40-205ENST00000571028 CA1P00915 261 aaPredicted RBP9.73□□□□□ -0.85
CCDC40-205ENST00000571028 SEC11BP0C7V7 166 aa9.73□□□□□ -0.85
CCDC40-205ENST00000571028 HLA-DRB4P13762 266 aa9.73□□□□□ -0.85
CCDC40-205ENST00000571028 C4BPBP20851 252 aa9.73□□□□□ -0.85
CCDC40-205ENST00000571028 PSG9Q00887 426 aa9.73□□□□□ -0.85
CCDC40-205ENST00000571028 ICAM4Q14773 271 aa9.73□□□□□ -0.85
CCDC40-205ENST00000571028 ZNF726P1Q15940 193 aa9.73□□□□□ -0.85
CCDC40-205ENST00000571028 LGALS9CQ6DKI2 356 aa9.73□□□□□ -0.85
CCDC40-205ENST00000571028 PQLC2Q6ZP29 291 aa9.73□□□□□ -0.85
CCDC40-205ENST00000571028 CSTL1Q9H114 145 aa9.73□□□□□ -0.85
CCDC40-205ENST00000571028 AAMDCQ9H7C9 122 aa9.73□□□□□ -0.85
CCDC40-205ENST00000571028 BOLA1Q9Y3E2 137 aa9.73□□□□□ -0.85
CCDC40-205ENST00000571028 HLA-DRB4X5D2U9 266 aa9.73□□□□□ -0.85
CCDC40-205ENST00000571028 CTXND1A0A1B0GTU2 59 aa9.72□□□□□ -0.85
CCDC40-205ENST00000571028 A0A1B0GV50 99 aa9.72□□□□□ -0.85
CCDC40-205ENST00000571028 PRAC2D3DTV9 90 aa9.72□□□□□ -0.85
CCDC40-205ENST00000571028 M0R3E3 92 aa9.72□□□□□ -0.85
CCDC40-205ENST00000571028 STAG3L2P0CL84 134 aa9.72□□□□□ -0.85
CCDC40-205ENST00000571028 STAG3L3P0CL85 134 aa9.72□□□□□ -0.85
CCDC40-205ENST00000571028 GCHFRP30047 84 aa9.72□□□□□ -0.85
CCDC40-205ENST00000571028 FHITP49789 147 aa9.72□□□□□ -0.85
CCDC40-205ENST00000571028 DEFB135Q30KP9 77 aa9.72□□□□□ -0.85
CCDC40-205ENST00000571028 SLC51BQ86UW2 128 aa9.72□□□□□ -0.85
CCDC40-205ENST00000571028 OVOL2Q9BRP0 275 aa9.72□□□□□ -0.85
CCDC40-205ENST00000571028 Q9H3A6 140 aa9.72□□□□□ -0.85
CCDC40-205ENST00000571028 TMPRSS5Q9H3S3 457 aa9.72□□□□□ -0.85
CCDC40-205ENST00000571028 PPP1R14DQ9NXH3 145 aa9.72□□□□□ -0.85
CCDC40-205ENST00000571028 CLEC5AQ9NY25 188 aa9.72□□□□□ -0.85
CCDC40-205ENST00000571028 RPH3ALQ9UNE2 315 aa9.72□□□□□ -0.85
CCDC40-205ENST00000571028 ZNF253O75346 499 aa9.71□□□□□ -0.86
CCDC40-205ENST00000571028 CXorf1O96002 111 aa9.71□□□□□ -0.86
CCDC40-205ENST00000571028 CNN1P51911 297 aaKnown RBP9.71□□□□□ -0.86
CCDC40-205ENST00000571028 OR8A1Q8NGG7 326 aa9.71□□□□□ -0.86
CCDC40-205ENST00000571028 STOML3Q8TAV4 291 aa9.71□□□□□ -0.86
CCDC40-205ENST00000571028 XCL2Q9UBD3 114 aa9.71□□□□□ -0.86
CCDC40-205ENST00000571028 KIAA1109Q2LD37 5005 aa9.7□□□□□ -0.86
CCDC40-205ENST00000571028 KIR2DL5BA0A0G2JN68 375 aa9.7□□□□□ -0.86
CCDC40-205ENST00000571028 KIR2DL5BA0A0G2JPC4 375 aa9.7□□□□□ -0.86
CCDC40-205ENST00000571028 MAP1LC3B2A6NCE7 125 aa9.7□□□□□ -0.86
CCDC40-205ENST00000571028 PGPA6NDG6 321 aa9.7□□□□□ -0.86
CCDC40-205ENST00000571028 DUSP14O95147 198 aaKnown RBP9.7□□□□□ -0.86
CCDC40-205ENST00000571028 NUTF2P61970 127 aaKnown RBP9.7□□□□□ -0.86
CCDC40-205ENST00000571028 ERCC8Q13216 396 aa9.7□□□□□ -0.86
CCDC40-205ENST00000571028 PDE6HQ13956 83 aa9.7□□□□□ -0.86
CCDC40-205ENST00000571028 EIF5AL1Q6IS14 154 aaKnown RBP9.7□□□□□ -0.86
CCDC40-205ENST00000571028 KIR2DL5AQ8N109 375 aa9.7□□□□□ -0.86
CCDC40-205ENST00000571028 OR10J6PQ8NGY7 276 aa9.7□□□□□ -0.86
CCDC40-205ENST00000571028 KIR2DL5BQ8NHK3 375 aa9.7□□□□□ -0.86
CCDC40-205ENST00000571028 MAP1LC3BQ9GZQ8 125 aa9.7□□□□□ -0.86
CCDC40-205ENST00000571028 SLC35B3Q9H1N7 401 aa9.7□□□□□ -0.86
CCDC40-205ENST00000571028 KMT2AQ03164 3969 aa9.7□□□□□ -0.86
CCDC40-205ENST00000571028 UMAD1C9J7I0 102 aa9.69□□□□□ -0.86
CCDC40-205ENST00000571028 BOLA2-SMG1P6H3BVE0 249 aa9.69□□□□□ -0.86
CCDC40-205ENST00000571028 UBE2CO00762 179 aa9.69□□□□□ -0.86
CCDC40-205ENST00000571028 CSN1S1P47710 185 aa9.69□□□□□ -0.86
CCDC40-205ENST00000571028 UBE2G2P60604 165 aa9.69□□□□□ -0.86
CCDC40-205ENST00000571028 FAM74A1Q5RGS3 127 aa9.69□□□□□ -0.86
CCDC40-205ENST00000571028 MORN3Q6PF18 240 aaPredicted RBP9.69□□□□□ -0.86
CCDC40-205ENST00000571028 CMTM2Q8TAZ6 248 aa9.69□□□□□ -0.86
CCDC40-205ENST00000571028 SFT2D1Q8WV19 159 aa9.69□□□□□ -0.86
CCDC40-205ENST00000571028 PRELID1Q9Y255 219 aa9.69□□□□□ -0.86
CCDC40-205ENST00000571028 AGRNO00468 2067 aa9.68□□□□□ -0.86
CCDC40-205ENST00000571028 IGKV2-40A0A087WW87 121 aaPredicted RBP9.68□□□□□ -0.86
CCDC40-205ENST00000571028 J3KRW8 73 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms