RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 TNCP24821 2201 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 IGF2RP11717 2491 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 MAP1BP46821 2468 aaKnown RBP2.76□□□□□ -1.97
SMG6-208ENST00000570874 TRAV1-1A0A0B4J248 108 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 IGKV1D-13A0A0B4J2D9 117 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 IGKV1-6A0A0C4DH72 117 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 PGPA6NDG6 321 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 CRYM-AS1A6NIL9 109 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 C16orf97H3BN30 126 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 H3BP45 60 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 APOMO95445 188 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 NAPSAO96009 420 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 KRASP01116 189 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 IGHV1-46P01743 117 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 NHLRC4P0CG21 123 aaPredicted RBP2.76□□□□□ -1.97
SMG6-208ENST00000570874 IGKV1-13P0DP09 117 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 SLC25A6P12236 298 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 OR10J1P30954 320 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 FCGR2CP31995 323 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 SUPT4H1P63272 117 aaKnown RBP2.76□□□□□ -1.97
SMG6-208ENST00000570874 COL10A1Q03692 680 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 HES1Q14469 280 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 ZNF146Q15072 292 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 SP6Q3SY56 376 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 VMA21Q3ZAQ7 101 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 LCN15Q6UWW0 184 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 TMEM14EPQ6UXP3 125 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 ACP7Q6ZNF0 438 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 Q6ZS49 121 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 NOTCH2NLQ7Z3S9 236 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 CCL17Q92583 94 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 MUCL1Q96DR8 90 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 CARD19Q96LW7 228 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 CIB3Q96Q77 187 aaPredicted RBP2.76□□□□□ -1.97
SMG6-208ENST00000570874 PAXXQ9BUH6 204 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 VAMP8Q9BV40 100 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 SSBP3Q9BWW4 388 aaPredicted RBP2.76□□□□□ -1.97
SMG6-208ENST00000570874 RPS10P5Q9NQ39 176 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 FKBP11Q9NYL4 201 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 CALYQ9NYX4 217 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 RBM12B-AS1Q9P1G2 102 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 TAAR3PQ9P1P4 343 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 MDFICQ9P1T7 246 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 ANKRD11Q6UB99 2663 aaPredicted RBP2.76□□□□□ -1.97
SMG6-208ENST00000570874 LAMA5O15230 3695 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 ATRXP46100 2492 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 ABCA2Q9BZC7 2435 aa2.76□□□□□ -1.97
SMG6-208ENST00000570874 SPTBN1Q01082 2364 aaKnown RBP2.75□□□□□ -1.97
SMG6-208ENST00000570874 IGLV3-9A0A075B6K5 115 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 IGKV1D-17A0A075B6S4 117 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 TRAV8-1A0A0A6YYK1 113 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 IGHV3-43A0A0B4J1X8 118 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 IGHV1-69-2A0A0G2JMI3 117 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 C7orf77A4D0Y5 90 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 RBMY1BA6NDE4 496 aaKnown RBP2.75□□□□□ -1.97
SMG6-208ENST00000570874 RBMY1EA6NEQ0 496 aaKnown RBP2.75□□□□□ -1.97
SMG6-208ENST00000570874 E7EQL1 145 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 H0Y9J4 135 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 CCDC179H3BU77 68 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 C19orf84I3L1E1 186 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 ATP6V0E1O15342 81 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 IGHV3-13P01766 116 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 PRB1P04280 392 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 HSPB1P04792 205 aaKnown RBP2.75□□□□□ -1.97
SMG6-208ENST00000570874 RBMY1DP0C7P1 496 aaKnown RBP2.75□□□□□ -1.97
SMG6-208ENST00000570874 IGLC1P0CG04 106 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 RBMY1A1P0DJD3 496 aaKnown RBP2.75□□□□□ -1.97
SMG6-208ENST00000570874 IGHV3-43DP0DP04 118 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 IFITM1P13164 125 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 ADCYAP1P18509 176 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 LMO1P25800 156 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 PSMB8P28062 276 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 THBS3P49746 956 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 NDUFV3P56181 108 aaKnown RBP2.75□□□□□ -1.97
SMG6-208ENST00000570874 CACNG7P62955 275 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 CATR1Q13166 79 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 MSMO1Q15800 293 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 RTL8BQ17RB0 113 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 MPV17LQ2QL34 196 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 ABCA11PQ4W5N1 156 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 KHDC3LQ587J8 217 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 FAM222AQ5U5X8 452 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 ZNF880Q6PDB4 577 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 MORN3Q6PF18 240 aaPredicted RBP2.75□□□□□ -1.97
SMG6-208ENST00000570874 AMTNQ6UX39 209 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 ZNF493Q6ZR52 646 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 SSX8Q7RTT4 187 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 ZNF429Q86V71 674 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 PRR15Q8IV56 129 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 HIST3H2BBQ8N257 126 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 RTN4IP1Q8WWV3 396 aaPredicted RBP2.75□□□□□ -1.97
SMG6-208ENST00000570874 IGF2BP2-AS1Q96M15 143 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 C19orf24Q9BVV8 132 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 WDR61Q9GZS3 305 aaKnown RBP2.75□□□□□ -1.97
SMG6-208ENST00000570874 PLEKHF2Q9H8W4 249 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 ZNF286AQ9HBT8 521 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 CCL28Q9NRJ3 127 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 CACNG5Q9UF02 275 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 FUT9Q9Y231 359 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 MRPS16Q9Y3D3 137 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms