RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 UQCC3Q6UW78 93 aa11.56□□□□□ -0.56
HERPUD1-219ENST00000570273 CCDC28AQ8IWP9 274 aa11.56□□□□□ -0.56
HERPUD1-219ENST00000570273 SLC7A5P1Q8MH63 180 aa11.56□□□□□ -0.56
HERPUD1-219ENST00000570273 FAM24BQ8N5W8 94 aa11.56□□□□□ -0.56
HERPUD1-219ENST00000570273 ZNF738Q8NE65 137 aa11.56□□□□□ -0.56
HERPUD1-219ENST00000570273 C20orf173Q96LM9 149 aa11.56□□□□□ -0.56
HERPUD1-219ENST00000570273 LINC00052Q96N35 136 aa11.56□□□□□ -0.56
HERPUD1-219ENST00000570273 TCEAL7Q9BRU2 100 aa11.56□□□□□ -0.56
HERPUD1-219ENST00000570273 PRELID1Q9Y255 219 aa11.56□□□□□ -0.56
HERPUD1-219ENST00000570273 PEX7O00628 323 aa11.55□□□□□ -0.56
HERPUD1-219ENST00000570273 ZNF688P0C7X2 276 aa11.55□□□□□ -0.56
HERPUD1-219ENST00000570273 PRB4P10163 310 aaPredicted RBP11.55□□□□□ -0.56
HERPUD1-219ENST00000570273 CEBPGP53567 150 aa11.55□□□□□ -0.56
HERPUD1-219ENST00000570273 EIF4E3Q8N5X7 224 aaKnown RBP11.55□□□□□ -0.56
HERPUD1-219ENST00000570273 MRPL53Q96EL3 112 aaKnown RBP11.55□□□□□ -0.56
HERPUD1-219ENST00000570273 GPR61Q9BZJ8 451 aa11.55□□□□□ -0.56
HERPUD1-219ENST00000570273 SMDT1Q9H4I9 107 aa11.55□□□□□ -0.56
HERPUD1-219ENST00000570273 EPDR1Q9UM22 224 aa11.55□□□□□ -0.56
HERPUD1-219ENST00000570273 TRRAPQ9Y4A5 3859 aa11.54□□□□□ -0.56
HERPUD1-219ENST00000570273 ZNF705FA8MVS1 300 aaPredicted RBP11.54□□□□□ -0.56
HERPUD1-219ENST00000570273 C9JQL5 133 aa11.54□□□□□ -0.56
HERPUD1-219ENST00000570273 SRP19P09132 144 aaKnown RBP11.54□□□□□ -0.56
HERPUD1-219ENST00000570273 PSMG4Q5JS54 123 aa11.54□□□□□ -0.56
HERPUD1-219ENST00000570273 PRR31Q5SQ13 230 aa11.54□□□□□ -0.56
HERPUD1-219ENST00000570273 TMEM250H0YL14 139 aa11.53□□□□□ -0.56
HERPUD1-219ENST00000570273 TCRAP04437 139 aa11.53□□□□□ -0.56
HERPUD1-219ENST00000570273 AKR1C3P42330 323 aa11.53□□□□□ -0.56
HERPUD1-219ENST00000570273 GOLT1AQ6ZVE7 132 aa11.53□□□□□ -0.56
HERPUD1-219ENST00000570273 CYB561D1Q8N8Q1 229 aa11.53□□□□□ -0.56
HERPUD1-219ENST00000570273 HIST1H2BAQ96A08 127 aa11.53□□□□□ -0.56
HERPUD1-219ENST00000570273 C11orf52Q96A22 123 aa11.53□□□□□ -0.56
HERPUD1-219ENST00000570273 RPUSD4Q96CM3 377 aaKnown RBP11.53□□□□□ -0.56
HERPUD1-219ENST00000570273 CITED4Q96RK1 184 aa11.53□□□□□ -0.56
HERPUD1-219ENST00000570273 ATG101Q9BSB4 218 aa11.53□□□□□ -0.56
HERPUD1-219ENST00000570273 SLC35B3Q9H1N7 401 aa11.53□□□□□ -0.56
HERPUD1-219ENST00000570273 VWFP04275 2813 aa11.53□□□□□ -0.56
HERPUD1-219ENST00000570273 PKD1L1Q8TDX9 2849 aa11.53□□□□□ -0.56
HERPUD1-219ENST00000570273 DIRC3C9JPN6 131 aa11.52□□□□□ -0.56
HERPUD1-219ENST00000570273 NDUFS6O75380 124 aaKnown RBP11.52□□□□□ -0.56
HERPUD1-219ENST00000570273 IGKV2-40A0A087WW87 121 aaPredicted RBP11.52□□□□□ -0.57
HERPUD1-219ENST00000570273 PRAC2D3DTV9 90 aa11.52□□□□□ -0.57
HERPUD1-219ENST00000570273 IGKV2D-40P01614 121 aaPredicted RBP11.52□□□□□ -0.57
HERPUD1-219ENST00000570273 SFTA3P0C7M3 94 aa11.52□□□□□ -0.57
HERPUD1-219ENST00000570273 CNN1P51911 297 aaKnown RBP11.52□□□□□ -0.57
HERPUD1-219ENST00000570273 ARL6IP6Q8N6S5 226 aa11.52□□□□□ -0.57
HERPUD1-219ENST00000570273 ZNF256Q9Y2P7 627 aaPredicted RBP11.52□□□□□ -0.57
HERPUD1-219ENST00000570273 K7EQM0 130 aa11.51□□□□□ -0.57
HERPUD1-219ENST00000570273 DEFB131AP59861 70 aa11.51□□□□□ -0.57
HERPUD1-219ENST00000570273 ZNF674Q2M3X9 581 aa11.51□□□□□ -0.57
HERPUD1-219ENST00000570273 C2CD4CQ8TF44 421 aa11.51□□□□□ -0.57
HERPUD1-219ENST00000570273 MAP6D1Q9H9H5 199 aa11.51□□□□□ -0.57
HERPUD1-219ENST00000570273 TRAV34A0A0B4J273 112 aa11.5□□□□□ -0.57
HERPUD1-219ENST00000570273 SERTM2A0A1B0GWG4 89 aa11.5□□□□□ -0.57
HERPUD1-219ENST00000570273 WIPF1O43516 503 aa11.5□□□□□ -0.57
HERPUD1-219ENST00000570273 DEFB1P60022 68 aa11.5□□□□□ -0.57
HERPUD1-219ENST00000570273 BEAN1Q3B7T3 259 aa11.5□□□□□ -0.57
HERPUD1-219ENST00000570273 DERL1Q9BUN8 251 aa11.5□□□□□ -0.57
HERPUD1-219ENST00000570273 TMEM218A2RU14 115 aa11.49□□□□□ -0.57
HERPUD1-219ENST00000570273 OR11H12B2RN74 326 aa11.49□□□□□ -0.57
HERPUD1-219ENST00000570273 F6UB75 175 aa11.49□□□□□ -0.57
HERPUD1-219ENST00000570273 UBE2G1P62253 170 aa11.49□□□□□ -0.57
HERPUD1-219ENST00000570273 HIST1H1AQ02539 215 aaPredicted RBP11.49□□□□□ -0.57
HERPUD1-219ENST00000570273 ODF3L2Q3SX64 289 aa11.49□□□□□ -0.57
HERPUD1-219ENST00000570273 SOHLH1Q5JUK2 328 aa11.49□□□□□ -0.57
HERPUD1-219ENST00000570273 OR10J6PQ8NGY7 276 aa11.49□□□□□ -0.57
HERPUD1-219ENST00000570273 LINC00479Q96M42 142 aa11.49□□□□□ -0.57
HERPUD1-219ENST00000570273 PARLQ9H300 379 aa11.49□□□□□ -0.57
HERPUD1-219ENST00000570273 TRAV8-1A0A0A6YYK1 113 aa11.48□□□□□ -0.57
HERPUD1-219ENST00000570273 RBAKDNA6NC62 111 aa11.48□□□□□ -0.57
HERPUD1-219ENST00000570273 RPL35P42766 123 aaKnown RBP11.48□□□□□ -0.57
HERPUD1-219ENST00000570273 CMC4P56277 68 aaPredicted RBP11.48□□□□□ -0.57
HERPUD1-219ENST00000570273 OXLD1Q5BKU9 147 aa11.48□□□□□ -0.57
HERPUD1-219ENST00000570273 EBLN2Q6P2I7 272 aa11.48□□□□□ -0.57
HERPUD1-219ENST00000570273 FOXI2Q6ZQN5 318 aa11.48□□□□□ -0.57
HERPUD1-219ENST00000570273 TMEM75Q8N9X5 138 aa11.48□□□□□ -0.57
HERPUD1-219ENST00000570273 OR8A1Q8NGG7 326 aa11.48□□□□□ -0.57
HERPUD1-219ENST00000570273 FMC1Q96HJ9 113 aa11.48□□□□□ -0.57
HERPUD1-219ENST00000570273 SGK494Q96LW2 274 aa11.48□□□□□ -0.57
HERPUD1-219ENST00000570273 VGLL1Q99990 258 aa11.48□□□□□ -0.57
HERPUD1-219ENST00000570273 SMIM7Q9BQ49 75 aa11.48□□□□□ -0.57
HERPUD1-219ENST00000570273 NOTCH3Q9UM47 2321 aa11.48□□□□□ -0.57
HERPUD1-219ENST00000570273 CD7P09564 240 aa11.47□□□□□ -0.57
HERPUD1-219ENST00000570273 ZNF705DP0CH99 300 aaPredicted RBP11.47□□□□□ -0.57
HERPUD1-219ENST00000570273 ZNF705BP0CI00 300 aaPredicted RBP11.47□□□□□ -0.57
HERPUD1-219ENST00000570273 ERCC8Q13216 396 aa11.47□□□□□ -0.57
HERPUD1-219ENST00000570273 TMEM183BQ1AE95 376 aa11.47□□□□□ -0.57
HERPUD1-219ENST00000570273 Q86TA4 180 aa11.47□□□□□ -0.57
HERPUD1-219ENST00000570273 GTSCR1Q86UQ5 136 aa11.47□□□□□ -0.57
HERPUD1-219ENST00000570273 KNCNA6PVL3 124 aa11.46□□□□□ -0.57
HERPUD1-219ENST00000570273 ZNF727A8MUV8 499 aa11.46□□□□□ -0.57
HERPUD1-219ENST00000570273 NPIPB6E9PJ23 425 aa11.46□□□□□ -0.57
HERPUD1-219ENST00000570273 F8W036 122 aa11.46□□□□□ -0.57
HERPUD1-219ENST00000570273 S100A9P06702 114 aaKnown RBP11.46□□□□□ -0.57
HERPUD1-219ENST00000570273 FLI1Q01543 452 aaPredicted RBP11.46□□□□□ -0.57
HERPUD1-219ENST00000570273 TMEM78Q5T7P6 136 aa11.46□□□□□ -0.57
HERPUD1-219ENST00000570273 GDF5OSQ5U4N7 250 aa11.46□□□□□ -0.57
HERPUD1-219ENST00000570273 PRNTQ86SH4 94 aa11.46□□□□□ -0.57
HERPUD1-219ENST00000570273 APRG1Q8IVJ8 170 aa11.46□□□□□ -0.57
HERPUD1-219ENST00000570273 SAV1Q9H4B6 383 aaPredicted RBP11.46□□□□□ -0.57
HERPUD1-219ENST00000570273 PSG8Q9UQ74 426 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms