RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 UBE2L5PA0A1B0GUS4 154 aa12.07□□□□□ -0.48
MAP1LC3B-208ENST00000570189 H7BYZ3 331 aa12.07□□□□□ -0.48
MAP1LC3B-208ENST00000570189 PDE6HQ13956 83 aa12.07□□□□□ -0.48
MAP1LC3B-208ENST00000570189 ENKURQ8TC29 256 aa12.07□□□□□ -0.48
MAP1LC3B-208ENST00000570189 PPP1R14DQ9NXH3 145 aa12.07□□□□□ -0.48
MAP1LC3B-208ENST00000570189 PTTG2Q9NZH5 202 aa12.07□□□□□ -0.48
MAP1LC3B-208ENST00000570189 DNAH2Q9P225 4427 aa12.06□□□□□ -0.48
MAP1LC3B-208ENST00000570189 AZU1P20160 251 aa12.06□□□□□ -0.48
MAP1LC3B-208ENST00000570189 FAM3BP58499 235 aaPredicted RBP12.06□□□□□ -0.48
MAP1LC3B-208ENST00000570189 BAXQ07812 192 aa12.06□□□□□ -0.48
MAP1LC3B-208ENST00000570189 OR10J6PQ8NGY7 276 aa12.06□□□□□ -0.48
MAP1LC3B-208ENST00000570189 RNASE8Q8TDE3 154 aaKnown RBP12.06□□□□□ -0.48
MAP1LC3B-208ENST00000570189 TMEM263Q8WUH6 116 aaKnown RBP12.06□□□□□ -0.48
MAP1LC3B-208ENST00000570189 LINC01587Q99440 93 aa12.06□□□□□ -0.48
MAP1LC3B-208ENST00000570189 NPCDR1Q9BY65 106 aa12.06□□□□□ -0.48
MAP1LC3B-208ENST00000570189 NPIPB6E9PJ23 425 aa12.05□□□□□ -0.48
MAP1LC3B-208ENST00000570189 PRM2P04554 102 aa12.05□□□□□ -0.48
MAP1LC3B-208ENST00000570189 FGF7P21781 194 aa12.05□□□□□ -0.48
MAP1LC3B-208ENST00000570189 CYCSP99999 105 aaKnown RBP12.05□□□□□ -0.48
MAP1LC3B-208ENST00000570189 IFITM3Q01628 133 aa12.05□□□□□ -0.48
MAP1LC3B-208ENST00000570189 TMEM88Q6PEY1 159 aa12.05□□□□□ -0.48
MAP1LC3B-208ENST00000570189 ZNF586Q9NXT0 402 aa12.05□□□□□ -0.48
MAP1LC3B-208ENST00000570189 TIMM8BQ9Y5J9 83 aaPredicted RBP12.05□□□□□ -0.48
MAP1LC3B-208ENST00000570189 TRBV19A0A075B6N1 114 aa12.04□□□□□ -0.48
MAP1LC3B-208ENST00000570189 TRAV5A0A0B4J249 113 aa12.04□□□□□ -0.48
MAP1LC3B-208ENST00000570189 CBY3A6NI87 242 aa12.04□□□□□ -0.48
MAP1LC3B-208ENST00000570189 PRAC2D3DTV9 90 aa12.04□□□□□ -0.48
MAP1LC3B-208ENST00000570189 E5RGE8 158 aa12.04□□□□□ -0.48
MAP1LC3B-208ENST00000570189 Q6ZR54 194 aa12.04□□□□□ -0.48
MAP1LC3B-208ENST00000570189 LINC00612Q8N6U2 182 aa12.04□□□□□ -0.48
MAP1LC3B-208ENST00000570189 MARVELD1Q9BSK0 173 aa12.04□□□□□ -0.48
MAP1LC3B-208ENST00000570189 SLC25A31Q9H0C2 315 aa12.04□□□□□ -0.48
MAP1LC3B-208ENST00000570189 PRELID1Q9Y255 219 aa12.04□□□□□ -0.48
MAP1LC3B-208ENST00000570189 RLN2P04090 185 aa12.03□□□□□ -0.48
MAP1LC3B-208ENST00000570189 HIST1H1EP10412 219 aaKnown RBP12.03□□□□□ -0.48
MAP1LC3B-208ENST00000570189 HTN3P15516 51 aa12.03□□□□□ -0.48
MAP1LC3B-208ENST00000570189 H3BTX0 84 aa12.02□□□□□ -0.49
MAP1LC3B-208ENST00000570189 ATP5G1P05496 136 aa12.02□□□□□ -0.49
MAP1LC3B-208ENST00000570189 SNRPCP09234 159 aaKnown RBP12.02□□□□□ -0.49
MAP1LC3B-208ENST00000570189 LEPP41159 167 aa12.02□□□□□ -0.49
MAP1LC3B-208ENST00000570189 ATP5G3P48201 142 aa12.02□□□□□ -0.49
MAP1LC3B-208ENST00000570189 NHLH2Q02577 135 aa12.02□□□□□ -0.49
MAP1LC3B-208ENST00000570189 GFI1BQ5VTD9 330 aa12.02□□□□□ -0.49
MAP1LC3B-208ENST00000570189 OR5C1Q8NGR4 320 aa12.02□□□□□ -0.49
MAP1LC3B-208ENST00000570189 KCNIP2Q9NS61 270 aa12.02□□□□□ -0.49
MAP1LC3B-208ENST00000570189 PKHD1P08F94 4074 aa12.01□□□□□ -0.49
MAP1LC3B-208ENST00000570189 HERC2O95714 4834 aa12.01□□□□□ -0.49
MAP1LC3B-208ENST00000570189 A0A1B0GVY2 172 aa12.01□□□□□ -0.49
MAP1LC3B-208ENST00000570189 INMT-MINDY4F8WBC2 141 aa12.01□□□□□ -0.49
MAP1LC3B-208ENST00000570189 H0YIZ8 118 aa12.01□□□□□ -0.49
MAP1LC3B-208ENST00000570189 NDUFB4O95168 129 aa12.01□□□□□ -0.49
MAP1LC3B-208ENST00000570189 CT45A10P0DMU9 189 aa12.01□□□□□ -0.49
MAP1LC3B-208ENST00000570189 DEFB130BP0DP73 79 aa12.01□□□□□ -0.49
MAP1LC3B-208ENST00000570189 DEFB130AP0DP74 79 aa12.01□□□□□ -0.49
MAP1LC3B-208ENST00000570189 KIR3DS1Q14943 382 aa12.01□□□□□ -0.49
MAP1LC3B-208ENST00000570189 UBE2DNLQ8IWF7 75 aa12.01□□□□□ -0.49
MAP1LC3B-208ENST00000570189 FAM19A4Q96LR4 140 aa12.01□□□□□ -0.49
MAP1LC3B-208ENST00000570189 OR5AC2Q9NZP5 309 aa12.01□□□□□ -0.49
MAP1LC3B-208ENST00000570189 RTL8CO15255 209 aa12□□□□□ -0.49
MAP1LC3B-208ENST00000570189 FAM167A-AS1Q96KT0 104 aa12□□□□□ -0.49
MAP1LC3B-208ENST00000570189 PYGO2Q9BRQ0 406 aa12□□□□□ -0.49
MAP1LC3B-208ENST00000570189 LINC00467Q9BRT7 94 aa12□□□□□ -0.49
MAP1LC3B-208ENST00000570189 KLLNB2CW77 178 aa11.99□□□□□ -0.49
MAP1LC3B-208ENST00000570189 SIX6O95475 246 aa11.99□□□□□ -0.49
MAP1LC3B-208ENST00000570189 NMBP08949 121 aa11.99□□□□□ -0.49
MAP1LC3B-208ENST00000570189 H2BFSP57053 126 aa11.99□□□□□ -0.49
MAP1LC3B-208ENST00000570189 LINC00477Q96M19 166 aa11.99□□□□□ -0.49
MAP1LC3B-208ENST00000570189 SLC25A2Q9BXI2 301 aa11.99□□□□□ -0.49
MAP1LC3B-208ENST00000570189 MRPL32Q9BYC8 188 aaKnown RBP11.99□□□□□ -0.49
MAP1LC3B-208ENST00000570189 WDR61Q9GZS3 305 aaKnown RBP11.99□□□□□ -0.49
MAP1LC3B-208ENST00000570189 SLC25A5P05141 298 aaKnown RBP11.98□□□□□ -0.49
MAP1LC3B-208ENST00000570189 PRB4P10163 310 aaPredicted RBP11.98□□□□□ -0.49
MAP1LC3B-208ENST00000570189 FCN2Q15485 313 aa11.98□□□□□ -0.49
MAP1LC3B-208ENST00000570189 GCSAMLQ5JQS6 135 aa11.98□□□□□ -0.49
MAP1LC3B-208ENST00000570189 C9orf47Q6ZRZ4 202 aa11.98□□□□□ -0.49
MAP1LC3B-208ENST00000570189 CCDC28AQ8IWP9 274 aa11.98□□□□□ -0.49
MAP1LC3B-208ENST00000570189 PPP1R1CQ8WVI7 109 aa11.98□□□□□ -0.49
MAP1LC3B-208ENST00000570189 PARD6GQ9BYG4 376 aaPredicted RBP11.98□□□□□ -0.49
MAP1LC3B-208ENST00000570189 NOP10Q9NPE3 64 aaKnown RBP11.98□□□□□ -0.49
MAP1LC3B-208ENST00000570189 F5H768 121 aa11.97□□□□□ -0.49
MAP1LC3B-208ENST00000570189 M0R3E3 92 aa11.97□□□□□ -0.49
MAP1LC3B-208ENST00000570189 PET100P0DJ07 73 aa11.97□□□□□ -0.49
MAP1LC3B-208ENST00000570189 PYYP10082 97 aa11.97□□□□□ -0.49
MAP1LC3B-208ENST00000570189 HTN1P15515 57 aa11.97□□□□□ -0.49
MAP1LC3B-208ENST00000570189 CRISP2P16562 243 aa11.97□□□□□ -0.49
MAP1LC3B-208ENST00000570189 DEFA1P59665 94 aa11.97□□□□□ -0.49
MAP1LC3B-208ENST00000570189 DEFA3P59666 94 aa11.97□□□□□ -0.49
MAP1LC3B-208ENST00000570189 DAZ2Q13117 558 aaKnown RBP11.97□□□□□ -0.49
MAP1LC3B-208ENST00000570189 THAP6Q8TBB0 222 aa11.97□□□□□ -0.49
MAP1LC3B-208ENST00000570189 ZNF503Q96F45 646 aa11.97□□□□□ -0.49
MAP1LC3B-208ENST00000570189 AAMDCQ9H7C9 122 aa11.97□□□□□ -0.49
MAP1LC3B-208ENST00000570189 TIMM9Q9Y5J7 89 aa11.97□□□□□ -0.49
MAP1LC3B-208ENST00000570189 PKD1P98161 4303 aa11.97□□□□□ -0.49
MAP1LC3B-208ENST00000570189 TRBV7-9A0A0J9YWB2 115 aa11.96□□□□□ -0.49
MAP1LC3B-208ENST00000570189 C17orf112F2Z3M2 114 aa11.96□□□□□ -0.49
MAP1LC3B-208ENST00000570189 H3BNG1 76 aa11.96□□□□□ -0.49
MAP1LC3B-208ENST00000570189 LRRC37A5PQ49AS3 106 aa11.96□□□□□ -0.49
MAP1LC3B-208ENST00000570189 C18orf15Q96N68 181 aa11.96□□□□□ -0.49
MAP1LC3B-208ENST00000570189 ATP5SQ99766 215 aa11.96□□□□□ -0.49
MAP1LC3B-208ENST00000570189 AGPAT4-IT1Q9H0P7 198 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms