RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 MDFICQ9P1T7 246 aa8.26□□□□□ -1.09
CAPN3-220ENST00000569827 FLVCR2Q9UPI3 526 aa8.26□□□□□ -1.09
CAPN3-220ENST00000569827 V9GYH0 126 aa8.26□□□□□ -1.09
CAPN3-220ENST00000569827 TRGV2A0A075B6R0 118 aa8.25□□□□□ -1.09
CAPN3-220ENST00000569827 TRGV1A0A0A0MS02 117 aa8.25□□□□□ -1.09
CAPN3-220ENST00000569827 AGPAT2O15120 278 aa8.25□□□□□ -1.09
CAPN3-220ENST00000569827 SIVA1O15304 175 aa8.25□□□□□ -1.09
CAPN3-220ENST00000569827 UBE2MP61081 183 aaKnown RBP8.25□□□□□ -1.09
CAPN3-220ENST00000569827 SELENOTP62341 195 aa8.25□□□□□ -1.09
CAPN3-220ENST00000569827 ERCC8Q13216 396 aa8.25□□□□□ -1.09
CAPN3-220ENST00000569827 TMEM14EPQ6UXP3 125 aa8.25□□□□□ -1.09
CAPN3-220ENST00000569827 LYPD1Q8N2G4 141 aa8.25□□□□□ -1.09
CAPN3-220ENST00000569827 ZNF431Q8TF32 576 aaPredicted RBP8.25□□□□□ -1.09
CAPN3-220ENST00000569827 RAB2BQ8WUD1 216 aa8.25□□□□□ -1.09
CAPN3-220ENST00000569827 TMEM37Q8WXS4 190 aa8.25□□□□□ -1.09
CAPN3-220ENST00000569827 MGST2Q99735 147 aa8.25□□□□□ -1.09
CAPN3-220ENST00000569827 MGAT4CQ9UBM8 478 aa8.25□□□□□ -1.09
CAPN3-220ENST00000569827 PIGBOS1A0A0B4J2F0 54 aa8.24□□□□□ -1.09
CAPN3-220ENST00000569827 C9orf170A2RU37 121 aa8.24□□□□□ -1.09
CAPN3-220ENST00000569827 H3BMQ9 156 aa8.24□□□□□ -1.09
CAPN3-220ENST00000569827 M0R3E3 92 aa8.24□□□□□ -1.09
CAPN3-220ENST00000569827 GOSR2O14653 212 aa8.24□□□□□ -1.09
CAPN3-220ENST00000569827 COX7A2P2O60397 106 aa8.24□□□□□ -1.09
CAPN3-220ENST00000569827 BTN1A1Q13410 526 aa8.24□□□□□ -1.09
CAPN3-220ENST00000569827 TEPPQ6URK8 271 aa8.24□□□□□ -1.09
CAPN3-220ENST00000569827 Q6ZQT7 251 aa8.24□□□□□ -1.09
CAPN3-220ENST00000569827 SMIM8Q96KF7 97 aa8.24□□□□□ -1.09
CAPN3-220ENST00000569827 C20orf144Q9BQM9 153 aa8.24□□□□□ -1.09
CAPN3-220ENST00000569827 NPVFQ9HCQ7 196 aa8.24□□□□□ -1.09
CAPN3-220ENST00000569827 FUT9Q9Y231 359 aa8.24□□□□□ -1.09
CAPN3-220ENST00000569827 KLF12Q9Y4X4 402 aa8.24□□□□□ -1.09
CAPN3-220ENST00000569827 IGLC2P0DOY2 106 aa8.23□□□□□ -1.09
CAPN3-220ENST00000569827 CXCL2P19875 107 aa8.23□□□□□ -1.09
CAPN3-220ENST00000569827 LEPP41159 167 aa8.23□□□□□ -1.09
CAPN3-220ENST00000569827 ERVFC1-1P60608 527 aa8.23□□□□□ -1.09
CAPN3-220ENST00000569827 CD300CQ08708 224 aa8.23□□□□□ -1.09
CAPN3-220ENST00000569827 BPIFA4PQ86YQ2 179 aa8.23□□□□□ -1.09
CAPN3-220ENST00000569827 C11orf72Q8NBR9 251 aa8.23□□□□□ -1.09
CAPN3-220ENST00000569827 SAT2Q96F10 170 aaPredicted RBP8.23□□□□□ -1.09
CAPN3-220ENST00000569827 SLC25A21Q9BQT8 299 aaPredicted RBP8.23□□□□□ -1.09
CAPN3-220ENST00000569827 RCL1Q9Y2P8 373 aaKnown RBP8.23□□□□□ -1.09
CAPN3-220ENST00000569827 NPIPB6E9PJ23 425 aa8.22□□□□□ -1.09
CAPN3-220ENST00000569827 H3BNG1 76 aa8.22□□□□□ -1.09
CAPN3-220ENST00000569827 K7EPK0 472 aa8.22□□□□□ -1.09
CAPN3-220ENST00000569827 AP3S2P59780 193 aa8.22□□□□□ -1.09
CAPN3-220ENST00000569827 DAZ2Q13117 558 aaKnown RBP8.22□□□□□ -1.09
CAPN3-220ENST00000569827 C10orf113Q5VZT2 155 aa8.22□□□□□ -1.09
CAPN3-220ENST00000569827 MIC13Q5XKP0 118 aa8.22□□□□□ -1.09
CAPN3-220ENST00000569827 ZNF546Q86UE3 836 aa8.22□□□□□ -1.09
CAPN3-220ENST00000569827 OR10P1Q8NGE3 313 aa8.22□□□□□ -1.09
CAPN3-220ENST00000569827 PYGO2Q9BRQ0 406 aa8.22□□□□□ -1.09
CAPN3-220ENST00000569827 MRPL16Q9NX20 251 aaKnown RBP8.22□□□□□ -1.09
CAPN3-220ENST00000569827 GSKIPQ9P0R6 139 aa8.22□□□□□ -1.09
CAPN3-220ENST00000569827 TP53TG3Q9ULZ0 132 aa8.22□□□□□ -1.09
CAPN3-220ENST00000569827 A0A087WTM6 91 aa8.21□□□□□ -1.1
CAPN3-220ENST00000569827 C7orf71A4D174 169 aa8.21□□□□□ -1.1
CAPN3-220ENST00000569827 CCSO14618 274 aa8.21□□□□□ -1.1
CAPN3-220ENST00000569827 PAX4O43316 350 aa8.21□□□□□ -1.1
CAPN3-220ENST00000569827 RNASE4P34096 147 aaKnown RBP8.21□□□□□ -1.1
CAPN3-220ENST00000569827 TMBIM6P55061 237 aa8.21□□□□□ -1.1
CAPN3-220ENST00000569827 IAH1Q2TAA2 248 aaPredicted RBP8.21□□□□□ -1.1
CAPN3-220ENST00000569827 PRR9Q5T870 116 aa8.21□□□□□ -1.1
CAPN3-220ENST00000569827 FRZBQ92765 325 aa8.21□□□□□ -1.1
CAPN3-220ENST00000569827 C8orf49Q96NF6 230 aa8.21□□□□□ -1.1
CAPN3-220ENST00000569827 PTTG2Q9NZH5 202 aa8.21□□□□□ -1.1
CAPN3-220ENST00000569827 PXMP4Q9Y6I8 212 aa8.21□□□□□ -1.1
CAPN3-220ENST00000569827 ICOSQ9Y6W8 199 aa8.21□□□□□ -1.1
CAPN3-220ENST00000569827 EREGO14944 169 aa8.2□□□□□ -1.1
CAPN3-220ENST00000569827 NOL3O60936 208 aaKnown RBP8.2□□□□□ -1.1
CAPN3-220ENST00000569827 OR4E1P0C645 316 aa8.2□□□□□ -1.1
CAPN3-220ENST00000569827 S100A7AQ86SG5 101 aa8.2□□□□□ -1.1
CAPN3-220ENST00000569827 WFDC10BQ8IUB3 73 aa8.2□□□□□ -1.1
CAPN3-220ENST00000569827 PGPEP1Q9NXJ5 209 aa8.2□□□□□ -1.1
CAPN3-220ENST00000569827 IGKV2-40A0A087WW87 121 aaPredicted RBP8.19□□□□□ -1.1
CAPN3-220ENST00000569827 C7orf66A4D0T2 115 aa8.19□□□□□ -1.1
CAPN3-220ENST00000569827 FNDC10F2Z333 226 aa8.19□□□□□ -1.1
CAPN3-220ENST00000569827 PRAF2O60831 178 aa8.19□□□□□ -1.1
CAPN3-220ENST00000569827 ZNF324O75467 553 aaPredicted RBP8.19□□□□□ -1.1
CAPN3-220ENST00000569827 IGKV2D-40P01614 121 aaPredicted RBP8.19□□□□□ -1.1
CAPN3-220ENST00000569827 MBPP02686 304 aaPredicted RBP8.19□□□□□ -1.1
CAPN3-220ENST00000569827 CAMLGP49069 296 aa8.19□□□□□ -1.1
CAPN3-220ENST00000569827 C4orf46Q504U0 113 aa8.19□□□□□ -1.1
CAPN3-220ENST00000569827 PXDC1Q5TGL8 231 aa8.19□□□□□ -1.1
CAPN3-220ENST00000569827 NRARPQ7Z6K4 114 aa8.19□□□□□ -1.1
CAPN3-220ENST00000569827 EXOC3-AS1Q8N2X6 119 aa8.19□□□□□ -1.1
CAPN3-220ENST00000569827 EIF4E3Q8N5X7 224 aaKnown RBP8.19□□□□□ -1.1
CAPN3-220ENST00000569827 ODF3Q96PU9 254 aa8.19□□□□□ -1.1
CAPN3-220ENST00000569827 SPINK4O60575 86 aa8.18□□□□□ -1.1
CAPN3-220ENST00000569827 TSC22D2O75157 780 aa8.18□□□□□ -1.1
CAPN3-220ENST00000569827 CST7O76096 145 aa8.18□□□□□ -1.1
CAPN3-220ENST00000569827 NDUFB6O95139 128 aa8.18□□□□□ -1.1
CAPN3-220ENST00000569827 SLC25A5P05141 298 aaKnown RBP8.18□□□□□ -1.1
CAPN3-220ENST00000569827 SFTA3P0C7M3 94 aa8.18□□□□□ -1.1
CAPN3-220ENST00000569827 PYYP10082 97 aa8.18□□□□□ -1.1
CAPN3-220ENST00000569827 TCL1AP56279 114 aa8.18□□□□□ -1.1
CAPN3-220ENST00000569827 ICAM4Q14773 271 aa8.18□□□□□ -1.1
CAPN3-220ENST00000569827 BAK1Q16611 211 aa8.18□□□□□ -1.1
CAPN3-220ENST00000569827 LYPD5Q6UWN5 251 aa8.18□□□□□ -1.1
CAPN3-220ENST00000569827 ZNF680Q8NEM1 530 aa8.18□□□□□ -1.1
CAPN3-220ENST00000569827 BLNKQ8WV28 456 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms