RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 DNASE2O00115 360 aaPredicted RBP7.8□□□□□ -1.16
CDH3-210ENST00000569117 SNRPCP09234 159 aaKnown RBP7.8□□□□□ -1.16
CDH3-210ENST00000569117 TFPI2P48307 235 aa7.8□□□□□ -1.16
CDH3-210ENST00000569117 PPT1P50897 306 aa7.8□□□□□ -1.16
CDH3-210ENST00000569117 GUCA2BQ16661 112 aa7.8□□□□□ -1.16
CDH3-210ENST00000569117 BEAN1Q3B7T3 259 aa7.8□□□□□ -1.16
CDH3-210ENST00000569117 LYPD1Q8N2G4 141 aa7.8□□□□□ -1.16
CDH3-210ENST00000569117 BLNKQ8WV28 456 aa7.8□□□□□ -1.16
CDH3-210ENST00000569117 TMPRSS5Q9H3S3 457 aa7.8□□□□□ -1.16
CDH3-210ENST00000569117 CLEC5AQ9NY25 188 aa7.8□□□□□ -1.16
CDH3-210ENST00000569117 A0A1W2PRE2 83 aa7.79□□□□□ -1.16
CDH3-210ENST00000569117 G3V4G9 280 aa7.79□□□□□ -1.16
CDH3-210ENST00000569117 SNRPD3P62318 126 aaKnown RBP7.79□□□□□ -1.16
CDH3-210ENST00000569117 PSG9Q00887 426 aa7.79□□□□□ -1.16
CDH3-210ENST00000569117 GAGE13Q4V321 117 aa7.79□□□□□ -1.16
CDH3-210ENST00000569117 CLLU1Q5K131 121 aa7.79□□□□□ -1.16
CDH3-210ENST00000569117 FAM24BQ8N5W8 94 aa7.79□□□□□ -1.16
CDH3-210ENST00000569117 MRPL53Q96EL3 112 aaKnown RBP7.79□□□□□ -1.16
CDH3-210ENST00000569117 FAM110AQ9BQ89 295 aa7.79□□□□□ -1.16
CDH3-210ENST00000569117 AAMDCQ9H7C9 122 aa7.79□□□□□ -1.16
CDH3-210ENST00000569117 MANBALQ9NQG1 85 aa7.79□□□□□ -1.16
CDH3-210ENST00000569117 OTORQ9NRC9 128 aa7.79□□□□□ -1.16
CDH3-210ENST00000569117 ZMAT5Q9UDW3 170 aaKnown RBP7.79□□□□□ -1.16
CDH3-210ENST00000569117 SORL1Q92673 2214 aa7.79□□□□□ -1.16
CDH3-210ENST00000569117 FAM74A7A6NL05 159 aa7.78□□□□□ -1.16
CDH3-210ENST00000569117 GGTLC3B5MD39 225 aa7.78□□□□□ -1.16
CDH3-210ENST00000569117 IFNA1P01562 189 aa7.78□□□□□ -1.16
CDH3-210ENST00000569117 ZNF688P0C7X2 276 aa7.78□□□□□ -1.16
CDH3-210ENST00000569117 ID1P41134 155 aa7.78□□□□□ -1.16
CDH3-210ENST00000569117 PTTG1IPP53801 180 aa7.78□□□□□ -1.16
CDH3-210ENST00000569117 RAB14P61106 215 aa7.78□□□□□ -1.16
CDH3-210ENST00000569117 CCL20P78556 96 aa7.78□□□□□ -1.16
CDH3-210ENST00000569117 ODF3L2Q3SX64 289 aa7.78□□□□□ -1.16
CDH3-210ENST00000569117 KPRPQ5T749 579 aaPredicted RBP7.78□□□□□ -1.16
CDH3-210ENST00000569117 RNF182Q8N6D2 247 aa7.78□□□□□ -1.16
CDH3-210ENST00000569117 PCNPQ8WW12 178 aaKnown RBP7.78□□□□□ -1.16
CDH3-210ENST00000569117 Q9H3A6 140 aa7.78□□□□□ -1.16
CDH3-210ENST00000569117 MAP6D1Q9H9H5 199 aa7.78□□□□□ -1.16
CDH3-210ENST00000569117 GNG13Q9P2W3 67 aa7.78□□□□□ -1.16
CDH3-210ENST00000569117 PRELID1Q9Y255 219 aa7.78□□□□□ -1.16
CDH3-210ENST00000569117 YTHDF2Q9Y5A9 579 aaKnown RBP7.78□□□□□ -1.16
CDH3-210ENST00000569117 BCL2P10415 239 aa7.77□□□□□ -1.17
CDH3-210ENST00000569117 RANP62826 216 aaKnown RBP7.77□□□□□ -1.17
CDH3-210ENST00000569117 PSMG4Q5JS54 123 aa7.77□□□□□ -1.17
CDH3-210ENST00000569117 GTSCR1Q86UQ5 136 aa7.77□□□□□ -1.17
CDH3-210ENST00000569117 EXOC3-AS1Q8N2X6 119 aa7.77□□□□□ -1.17
CDH3-210ENST00000569117 C20orf173Q96LM9 149 aa7.77□□□□□ -1.17
CDH3-210ENST00000569117 TCEAL7Q9BRU2 100 aa7.77□□□□□ -1.17
CDH3-210ENST00000569117 NKX6-2Q9C056 277 aaPredicted RBP7.77□□□□□ -1.17
CDH3-210ENST00000569117 NBEAL1Q6ZS30 2694 aa7.77□□□□□ -1.17
CDH3-210ENST00000569117 M0R3E3 92 aa7.76□□□□□ -1.17
CDH3-210ENST00000569117 PAGE4O60829 102 aa7.76□□□□□ -1.17
CDH3-210ENST00000569117 CD7P09564 240 aa7.76□□□□□ -1.17
CDH3-210ENST00000569117 HLA-DMBP28068 263 aa7.76□□□□□ -1.17
CDH3-210ENST00000569117 TAGLN2P37802 199 aaKnown RBP7.76□□□□□ -1.17
CDH3-210ENST00000569117 CMC4P56277 68 aaPredicted RBP7.76□□□□□ -1.17
CDH3-210ENST00000569117 CD81P60033 236 aa7.76□□□□□ -1.17
CDH3-210ENST00000569117 KRTAP10-11P60412 298 aa7.76□□□□□ -1.17
CDH3-210ENST00000569117 UBE2G2P60604 165 aa7.76□□□□□ -1.17
CDH3-210ENST00000569117 ICAM4Q14773 271 aa7.76□□□□□ -1.17
CDH3-210ENST00000569117 PSG3Q16557 428 aa7.76□□□□□ -1.17
CDH3-210ENST00000569117 IGFL4Q6B9Z1 124 aa7.76□□□□□ -1.17
CDH3-210ENST00000569117 ARL6IP6Q8N6S5 226 aa7.76□□□□□ -1.17
CDH3-210ENST00000569117 C5orf17Q8NAS9 161 aa7.76□□□□□ -1.17
CDH3-210ENST00000569117 ZNF738Q8NE65 137 aa7.76□□□□□ -1.17
CDH3-210ENST00000569117 NOTCH1P46531 2555 aa7.75□□□□□ -1.17
CDH3-210ENST00000569117 PGPA6NDG6 321 aa7.75□□□□□ -1.17
CDH3-210ENST00000569117 OR11H12B2RN74 326 aa7.75□□□□□ -1.17
CDH3-210ENST00000569117 ATP5G3P48201 142 aa7.75□□□□□ -1.17
CDH3-210ENST00000569117 DEFB131AP59861 70 aa7.75□□□□□ -1.17
CDH3-210ENST00000569117 MEF2BQ02080 365 aaPredicted RBP7.75□□□□□ -1.17
CDH3-210ENST00000569117 CST9LP1Q5W188 147 aa7.75□□□□□ -1.17
CDH3-210ENST00000569117 RXFP4Q8TDU9 374 aa7.75□□□□□ -1.17
CDH3-210ENST00000569117 RPUSD4Q96CM3 377 aaKnown RBP7.75□□□□□ -1.17
CDH3-210ENST00000569117 LINC00052Q96N35 136 aa7.75□□□□□ -1.17
CDH3-210ENST00000569117 FAM210AQ96ND0 272 aa7.75□□□□□ -1.17
CDH3-210ENST00000569117 TXNDC17Q9BRA2 123 aa7.75□□□□□ -1.17
CDH3-210ENST00000569117 FAM30AQ9NZY2 134 aa7.75□□□□□ -1.17
CDH3-210ENST00000569117 VAX2Q9UIW0 290 aa7.75□□□□□ -1.17
CDH3-210ENST00000569117 C11orf94C9JXX5 98 aa7.74□□□□□ -1.17
CDH3-210ENST00000569117 SLC25A5P05141 298 aaKnown RBP7.74□□□□□ -1.17
CDH3-210ENST00000569117 CSN1S1P47710 185 aa7.74□□□□□ -1.17
CDH3-210ENST00000569117 HAGHQ16775 308 aa7.74□□□□□ -1.17
CDH3-210ENST00000569117 ZNF506Q5JVG8 444 aa7.74□□□□□ -1.17
CDH3-210ENST00000569117 FOXI2Q6ZQN5 318 aa7.74□□□□□ -1.17
CDH3-210ENST00000569117 CMTM2Q8TAZ6 248 aa7.74□□□□□ -1.17
CDH3-210ENST00000569117 PRR25Q96S07 402 aa7.74□□□□□ -1.17
CDH3-210ENST00000569117 SAV1Q9H4B6 383 aaPredicted RBP7.74□□□□□ -1.17
CDH3-210ENST00000569117 DNAH3Q8TD57 4116 aa7.74□□□□□ -1.17
CDH3-210ENST00000569117 A0A0J9YX75 114 aa7.73□□□□□ -1.17
CDH3-210ENST00000569117 SERTM2A0A1B0GWG4 89 aa7.73□□□□□ -1.17
CDH3-210ENST00000569117 RBFOX3A6NFN3 312 aa7.73□□□□□ -1.17
CDH3-210ENST00000569117 ZNF705FA8MVS1 300 aaPredicted RBP7.73□□□□□ -1.17
CDH3-210ENST00000569117 DIRC3C9JPN6 131 aa7.73□□□□□ -1.17
CDH3-210ENST00000569117 PRAC2D3DTV9 90 aa7.73□□□□□ -1.17
CDH3-210ENST00000569117 NDUFS6O75380 124 aaKnown RBP7.73□□□□□ -1.17
CDH3-210ENST00000569117 TCRAP04437 139 aa7.73□□□□□ -1.17
CDH3-210ENST00000569117 HLA-DRB4P13762 266 aa7.73□□□□□ -1.17
CDH3-210ENST00000569117 APRG1Q8IVJ8 170 aa7.73□□□□□ -1.17
CDH3-210ENST00000569117 OR8A1Q8NGG7 326 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms