RNA–Protein interactions for RNA: ENST00000568890.5

CNEP1R1-210, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 1,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-210ENST00000568890 C4BPBP20851 252 aa12.17□□□□□ -0.46
CNEP1R1-210ENST00000568890 UBE2L3P68036 154 aaKnown RBP12.17□□□□□ -0.46
CNEP1R1-210ENST00000568890 AMTNQ6UX39 209 aa12.17□□□□□ -0.46
CNEP1R1-210ENST00000568890 PQLC2Q6ZP29 291 aa12.17□□□□□ -0.46
CNEP1R1-210ENST00000568890 OR4B1Q8NGF8 309 aa12.17□□□□□ -0.46
CNEP1R1-210ENST00000568890 ACTR3CQ9C0K3 210 aaPredicted RBP12.17□□□□□ -0.46
CNEP1R1-210ENST00000568890 TMPRSS5Q9H3S3 457 aa12.17□□□□□ -0.46
CNEP1R1-210ENST00000568890 CNN1P51911 297 aaKnown RBP12.16□□□□□ -0.46
CNEP1R1-210ENST00000568890 ICAM4Q14773 271 aa12.16□□□□□ -0.46
CNEP1R1-210ENST00000568890 AKR1C8PQ5T2L2 129 aa12.16□□□□□ -0.46
CNEP1R1-210ENST00000568890 OVOL2Q9BRP0 275 aa12.16□□□□□ -0.46
CNEP1R1-210ENST00000568890 SLC35B3Q9H1N7 401 aa12.16□□□□□ -0.46
CNEP1R1-210ENST00000568890 NHLRC4P0CG21 123 aaPredicted RBP12.16□□□□□ -0.46
CNEP1R1-210ENST00000568890 TPT1P13693 172 aaKnown RBP12.16□□□□□ -0.46
CNEP1R1-210ENST00000568890 FXYD7P58549 80 aa12.16□□□□□ -0.46
CNEP1R1-210ENST00000568890 DEFB135Q30KP9 77 aa12.16□□□□□ -0.46
CNEP1R1-210ENST00000568890 OR8A1Q8NGG7 326 aa12.16□□□□□ -0.46
CNEP1R1-210ENST00000568890 SUN5Q8TC36 379 aa12.16□□□□□ -0.46
CNEP1R1-210ENST00000568890 A8MTW9 85 aa12.15□□□□□ -0.46
CNEP1R1-210ENST00000568890 APOC4P55056 127 aa12.15□□□□□ -0.46
CNEP1R1-210ENST00000568890 FGF8P55075 233 aaPredicted RBP12.15□□□□□ -0.46
CNEP1R1-210ENST00000568890 EBLN2Q6P2I7 272 aa12.15□□□□□ -0.46
CNEP1R1-210ENST00000568890 CSNK1G2-AS1Q8NCQ2 148 aa12.15□□□□□ -0.46
CNEP1R1-210ENST00000568890 CLEC5AQ9NY25 188 aa12.15□□□□□ -0.46
CNEP1R1-210ENST00000568890 GCHFRP30047 84 aa12.14□□□□□ -0.47
CNEP1R1-210ENST00000568890 SLC51BQ86UW2 128 aa12.14□□□□□ -0.47
CNEP1R1-210ENST00000568890 CTXND1A0A1B0GTU2 59 aa12.14□□□□□ -0.47
CNEP1R1-210ENST00000568890 CA1P00915 261 aaPredicted RBP12.14□□□□□ -0.47
CNEP1R1-210ENST00000568890 PSG9Q00887 426 aa12.14□□□□□ -0.47
CNEP1R1-210ENST00000568890 Q6ZWC4 215 aa12.14□□□□□ -0.47
CNEP1R1-210ENST00000568890 CLUHP3Q96NS8 147 aa12.14□□□□□ -0.47
CNEP1R1-210ENST00000568890 Q9H3A6 140 aa12.14□□□□□ -0.47
CNEP1R1-210ENST00000568890 HIST1H1AQ02539 215 aaPredicted RBP12.13□□□□□ -0.47
CNEP1R1-210ENST00000568890 XCL2Q9UBD3 114 aa12.13□□□□□ -0.47
CNEP1R1-210ENST00000568890 UBE2CO00762 179 aa12.12□□□□□ -0.47
CNEP1R1-210ENST00000568890 CXorf1O96002 111 aa12.12□□□□□ -0.47
CNEP1R1-210ENST00000568890 EIF5AP63241 154 aaKnown RBP12.12□□□□□ -0.47
CNEP1R1-210ENST00000568890 ERCC8Q13216 396 aa12.12□□□□□ -0.47
CNEP1R1-210ENST00000568890 KIR3DS1Q14943 382 aa12.12□□□□□ -0.47
CNEP1R1-210ENST00000568890 RNF183Q96D59 192 aa12.12□□□□□ -0.47
CNEP1R1-210ENST00000568890 RCHY1Q96PM5 261 aa12.12□□□□□ -0.47
CNEP1R1-210ENST00000568890 SPATA25Q9BR10 227 aa12.12□□□□□ -0.47
CNEP1R1-210ENST00000568890 BOLA2-SMG1P6H3BVE0 249 aa12.12□□□□□ -0.47
CNEP1R1-210ENST00000568890 FAM213BQ8TBF2 198 aa12.12□□□□□ -0.47
CNEP1R1-210ENST00000568890 PGPA6NDG6 321 aa12.11□□□□□ -0.47
CNEP1R1-210ENST00000568890 UMAD1C9J7I0 102 aa12.11□□□□□ -0.47
CNEP1R1-210ENST00000568890 M0R2Z0 102 aa12.11□□□□□ -0.47
CNEP1R1-210ENST00000568890 FAM74A1Q5RGS3 127 aa12.11□□□□□ -0.47
CNEP1R1-210ENST00000568890 LYPD1Q8N2G4 141 aa12.11□□□□□ -0.47
CNEP1R1-210ENST00000568890 ZMAT4Q9H898 229 aa12.11□□□□□ -0.47
CNEP1R1-210ENST00000568890 IGKV2-40A0A087WW87 121 aaPredicted RBP12.1□□□□□ -0.47
CNEP1R1-210ENST00000568890 CRXO43186 299 aaPredicted RBP12.1□□□□□ -0.47
CNEP1R1-210ENST00000568890 IGKV2D-40P01614 121 aaPredicted RBP12.1□□□□□ -0.47
CNEP1R1-210ENST00000568890 CT45A10P0DMU9 189 aa12.1□□□□□ -0.47
CNEP1R1-210ENST00000568890 MORN3Q6PF18 240 aaPredicted RBP12.1□□□□□ -0.47
CNEP1R1-210ENST00000568890 MBD3L1Q8WWY6 194 aa12.1□□□□□ -0.47
CNEP1R1-210ENST00000568890 VGLL1Q99990 258 aa12.1□□□□□ -0.47
CNEP1R1-210ENST00000568890 AGPAT4-IT1Q9H0P7 198 aa12.1□□□□□ -0.47
CNEP1R1-210ENST00000568890 AAMDCQ9H7C9 122 aa12.1□□□□□ -0.47
CNEP1R1-210ENST00000568890 U3KQK5 164 aa12.1□□□□□ -0.47
CNEP1R1-210ENST00000568890 MAP1LC3B2A6NCE7 125 aa12.1□□□□□ -0.47
CNEP1R1-210ENST00000568890 SPRY2O43597 315 aa12.1□□□□□ -0.47
CNEP1R1-210ENST00000568890 SPINK13Q1W4C9 94 aa12.1□□□□□ -0.47
CNEP1R1-210ENST00000568890 SFT2D1Q8WV19 159 aa12.1□□□□□ -0.47
CNEP1R1-210ENST00000568890 MRPL53Q96EL3 112 aaKnown RBP12.1□□□□□ -0.47
CNEP1R1-210ENST00000568890 MAP1LC3BQ9GZQ8 125 aa12.1□□□□□ -0.47
CNEP1R1-210ENST00000568890 PRELID1Q9Y255 219 aa12.09□□□□□ -0.47
CNEP1R1-210ENST00000568890 YTHDF2Q9Y5A9 579 aaKnown RBP12.09□□□□□ -0.47
CNEP1R1-210ENST00000568890 A0A1B0GV50 99 aa12.09□□□□□ -0.47
CNEP1R1-210ENST00000568890 GGTLC3B5MD39 225 aa12.09□□□□□ -0.47
CNEP1R1-210ENST00000568890 DUSP14O95147 198 aaKnown RBP12.09□□□□□ -0.47
CNEP1R1-210ENST00000568890 SULT1A2P50226 295 aa12.09□□□□□ -0.47
CNEP1R1-210ENST00000568890 NUTF2P61970 127 aaKnown RBP12.09□□□□□ -0.47
CNEP1R1-210ENST00000568890 CCL20P78556 96 aa12.09□□□□□ -0.47
CNEP1R1-210ENST00000568890 IQCF2Q8IXL9 164 aa12.09□□□□□ -0.47
CNEP1R1-210ENST00000568890 OTORQ9NRC9 128 aa12.09□□□□□ -0.47
CNEP1R1-210ENST00000568890 TRAV12-2A0A075B6T6 113 aa12.08□□□□□ -0.48
CNEP1R1-210ENST00000568890 NPIPB6E9PJ23 425 aa12.08□□□□□ -0.48
CNEP1R1-210ENST00000568890 SUMO1P63165 101 aaKnown RBP12.08□□□□□ -0.48
CNEP1R1-210ENST00000568890 GNG5P63218 68 aa12.08□□□□□ -0.48
CNEP1R1-210ENST00000568890 ALKAL2Q6UX46 152 aa12.08□□□□□ -0.48
CNEP1R1-210ENST00000568890 OR10J6PQ8NGY7 276 aa12.08□□□□□ -0.48
CNEP1R1-210ENST00000568890 TMEM167BQ9NRX6 74 aa12.08□□□□□ -0.48
CNEP1R1-210ENST00000568890 TP53TG1Q9Y2A0 90 aa12.08□□□□□ -0.48
CNEP1R1-210ENST00000568890 DIRC3C9JPN6 131 aa12.07□□□□□ -0.48
CNEP1R1-210ENST00000568890 PRM2P04554 102 aa12.07□□□□□ -0.48
CNEP1R1-210ENST00000568890 RBMY1A1P0DJD3 496 aaKnown RBP12.07□□□□□ -0.48
CNEP1R1-210ENST00000568890 RBMY1CP0DJD4 496 aa12.07□□□□□ -0.48
CNEP1R1-210ENST00000568890 UBE2G2P60604 165 aa12.07□□□□□ -0.48
CNEP1R1-210ENST00000568890 RBMY1FQ15415 496 aaKnown RBP12.07□□□□□ -0.48
CNEP1R1-210ENST00000568890 C1orf158Q8N1D5 194 aa12.07□□□□□ -0.48
CNEP1R1-210ENST00000568890 H2AFB1P0C5Y9 115 aa12.07□□□□□ -0.48
CNEP1R1-210ENST00000568890 DPPA3Q6W0C5 159 aa12.07□□□□□ -0.48
CNEP1R1-210ENST00000568890 C9orf47Q6ZRZ4 202 aa12.07□□□□□ -0.48
CNEP1R1-210ENST00000568890 OR11H2Q8NH07 326 aa12.07□□□□□ -0.48
CNEP1R1-210ENST00000568890 EIF5AL1Q6IS14 154 aaKnown RBP12.06□□□□□ -0.48
CNEP1R1-210ENST00000568890 FAM19A4Q96LR4 140 aa12.06□□□□□ -0.48
CNEP1R1-210ENST00000568890 RARRES2Q99969 163 aa12.06□□□□□ -0.48
CNEP1R1-210ENST00000568890 X6R8D5 127 aa12.06□□□□□ -0.48
CNEP1R1-210ENST00000568890 FAM74A7A6NL05 159 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms