RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 THAP8Q8NA92 274 aa9.54□□□□□ -0.88
TMEM170A-205ENST00000568559 PMCHL2Q9BQD1 86 aa9.54□□□□□ -0.88
TMEM170A-205ENST00000568559 TUBA4BQ9H853 241 aa9.54□□□□□ -0.88
TMEM170A-205ENST00000568559 MRPL36Q9P0J6 103 aaKnown RBP9.54□□□□□ -0.88
TMEM170A-205ENST00000568559 ATMQ13315 3056 aa9.53□□□□□ -0.88
TMEM170A-205ENST00000568559 INS-IGF2F8WCM5 200 aa9.53□□□□□ -0.88
TMEM170A-205ENST00000568559 CD99P14209 185 aa9.53□□□□□ -0.88
TMEM170A-205ENST00000568559 PSMG4Q5JS54 123 aa9.53□□□□□ -0.88
TMEM170A-205ENST00000568559 ITPR3Q14573 2671 aa9.53□□□□□ -0.88
TMEM170A-205ENST00000568559 IGLV11-55A0A075B6I3 123 aa9.53□□□□□ -0.88
TMEM170A-205ENST00000568559 A6NDX4 124 aa9.53□□□□□ -0.88
TMEM170A-205ENST00000568559 CRYGBP07316 175 aa9.53□□□□□ -0.88
TMEM170A-205ENST00000568559 UBE2E2Q96LR5 201 aa9.53□□□□□ -0.88
TMEM170A-205ENST00000568559 SPRY2O43597 315 aa9.53□□□□□ -0.88
TMEM170A-205ENST00000568559 FOLR2P14207 255 aa9.53□□□□□ -0.88
TMEM170A-205ENST00000568559 SRIP30626 198 aa9.53□□□□□ -0.88
TMEM170A-205ENST00000568559 EBI3Q14213 229 aa9.53□□□□□ -0.88
TMEM170A-205ENST00000568559 KLHL30-AS1Q8NEE0 82 aa9.53□□□□□ -0.88
TMEM170A-205ENST00000568559 YTHDF2Q9Y5A9 579 aaKnown RBP9.53□□□□□ -0.88
TMEM170A-205ENST00000568559 NBEAQ8NFP9 2946 aa9.53□□□□□ -0.88
TMEM170A-205ENST00000568559 IGKV1OR2-108A0A075B7D4 117 aa9.52□□□□□ -0.88
TMEM170A-205ENST00000568559 HOXA5P20719 270 aa9.52□□□□□ -0.88
TMEM170A-205ENST00000568559 CKS2P33552 79 aa9.52□□□□□ -0.88
TMEM170A-205ENST00000568559 POLR3KQ9Y2Y1 108 aaPredicted RBP9.52□□□□□ -0.88
TMEM170A-205ENST00000568559 SAP30O75446 220 aa9.52□□□□□ -0.89
TMEM170A-205ENST00000568559 APCSP02743 223 aa9.52□□□□□ -0.89
TMEM170A-205ENST00000568559 RPL35AP18077 110 aaKnown RBP9.52□□□□□ -0.89
TMEM170A-205ENST00000568559 C1QL4Q86Z23 238 aa9.52□□□□□ -0.89
TMEM170A-205ENST00000568559 LINC00477Q96M19 166 aa9.52□□□□□ -0.89
TMEM170A-205ENST00000568559 PACRGQ96M98 296 aaPredicted RBP9.52□□□□□ -0.89
TMEM170A-205ENST00000568559 OTORQ9NRC9 128 aa9.52□□□□□ -0.89
TMEM170A-205ENST00000568559 EPDR1Q9UM22 224 aa9.52□□□□□ -0.89
TMEM170A-205ENST00000568559 PAX2Q02962 417 aa9.52□□□□□ -0.89
TMEM170A-205ENST00000568559 SHANK2-AS3Q9BTD1 123 aa9.52□□□□□ -0.89
TMEM170A-205ENST00000568559 CDC42EP3Q9UKI2 254 aa9.52□□□□□ -0.89
TMEM170A-205ENST00000568559 CRYGCP07315 174 aa9.52□□□□□ -0.89
TMEM170A-205ENST00000568559 KLHDC1Q8N7A1 406 aa9.52□□□□□ -0.89
TMEM170A-205ENST00000568559 SNAI2O43623 268 aa9.51□□□□□ -0.89
TMEM170A-205ENST00000568559 ZNF56Q15929 161 aa9.51□□□□□ -0.89
TMEM170A-205ENST00000568559 RRN3P1Q2M238 152 aa9.51□□□□□ -0.89
TMEM170A-205ENST00000568559 FAM19A2Q8N3H0 131 aa9.51□□□□□ -0.89
TMEM170A-205ENST00000568559 RNF182Q8N6D2 247 aa9.51□□□□□ -0.89
TMEM170A-205ENST00000568559 GPR82Q96P67 336 aa9.51□□□□□ -0.89
TMEM170A-205ENST00000568559 FOXC2Q99958 501 aa9.51□□□□□ -0.89
TMEM170A-205ENST00000568559 DEFB121Q5J5C9 76 aa9.51□□□□□ -0.89
TMEM170A-205ENST00000568559 SDF2L1Q9HCN8 221 aa9.51□□□□□ -0.89
TMEM170A-205ENST00000568559 A8MWL6 223 aa9.51□□□□□ -0.89
TMEM170A-205ENST00000568559 IGKV1-17P01599 117 aa9.51□□□□□ -0.89
TMEM170A-205ENST00000568559 SIGLEC15Q6ZMC9 328 aa9.51□□□□□ -0.89
TMEM170A-205ENST00000568559 CIARTQ8N365 385 aaPredicted RBP9.51□□□□□ -0.89
TMEM170A-205ENST00000568559 PRDM13Q9H4Q3 707 aa9.51□□□□□ -0.89
TMEM170A-205ENST00000568559 PEMTQ9UBM1 199 aa9.51□□□□□ -0.89
TMEM170A-205ENST00000568559 A0A1B0GW64 132 aa9.5□□□□□ -0.89
TMEM170A-205ENST00000568559 IGHG2P01859 326 aa9.5□□□□□ -0.89
TMEM170A-205ENST00000568559 SNRPD3P62318 126 aaKnown RBP9.5□□□□□ -0.89
TMEM170A-205ENST00000568559 MBD6Q96DN6 1003 aa9.5□□□□□ -0.89
TMEM170A-205ENST00000568559 FANCD2OSQ96PS1 177 aa9.5□□□□□ -0.89
TMEM170A-205ENST00000568559 ZNF491Q8N8L2 437 aa9.5□□□□□ -0.89
TMEM170A-205ENST00000568559 IGHV3-53P01767 116 aa9.5□□□□□ -0.89
TMEM170A-205ENST00000568559 PTTG1IPP53801 180 aa9.5□□□□□ -0.89
TMEM170A-205ENST00000568559 IGKV3D-20A0A0C4DH25 116 aa9.5□□□□□ -0.89
TMEM170A-205ENST00000568559 RPL23P62829 140 aaKnown RBP9.5□□□□□ -0.89
TMEM170A-205ENST00000568559 SFRP2Q96HF1 295 aa9.5□□□□□ -0.89
TMEM170A-205ENST00000568559 FAM159AQ6UWV7 190 aa9.49□□□□□ -0.89
TMEM170A-205ENST00000568559 OCC1Q8TAD7 63 aa9.49□□□□□ -0.89
TMEM170A-205ENST00000568559 ZNF502Q8TBZ5 544 aa9.49□□□□□ -0.89
TMEM170A-205ENST00000568559 RHPN1-AS1Q9BWJ2 59 aa9.49□□□□□ -0.89
TMEM170A-205ENST00000568559 SLC25A2Q9BXI2 301 aa9.49□□□□□ -0.89
TMEM170A-205ENST00000568559 MRPL18Q9H0U6 180 aaKnown RBP9.49□□□□□ -0.89
TMEM170A-205ENST00000568559 TACC2O95359 2948 aa9.49□□□□□ -0.89
TMEM170A-205ENST00000568559 RPLP1P05386 114 aaKnown RBP9.49□□□□□ -0.89
TMEM170A-205ENST00000568559 RIGQ13278 110 aa9.49□□□□□ -0.89
TMEM170A-205ENST00000568559 C10orf91Q5T1B1 145 aa9.49□□□□□ -0.89
TMEM170A-205ENST00000568559 SLC50A1Q9BRV3 221 aa9.49□□□□□ -0.89
TMEM170A-205ENST00000568559 DAZ1Q9NQZ3 744 aaKnown RBP9.49□□□□□ -0.89
TMEM170A-205ENST00000568559 ZNF256Q9Y2P7 627 aaPredicted RBP9.49□□□□□ -0.89
TMEM170A-205ENST00000568559 EREGO14944 169 aa9.48□□□□□ -0.89
TMEM170A-205ENST00000568559 ELANEP08246 267 aa9.48□□□□□ -0.89
TMEM170A-205ENST00000568559 Q8N6K4 173 aa9.48□□□□□ -0.89
TMEM170A-205ENST00000568559 LINC01587Q99440 93 aa9.48□□□□□ -0.89
TMEM170A-205ENST00000568559 H3BUA1 57 aa9.48□□□□□ -0.89
TMEM170A-205ENST00000568559 KCNS1Q96KK3 526 aa9.48□□□□□ -0.89
TMEM170A-205ENST00000568559 VAMP8Q9BV40 100 aa9.48□□□□□ -0.89
TMEM170A-205ENST00000568559 DCHS1Q96JQ0 3298 aa9.48□□□□□ -0.89
TMEM170A-205ENST00000568559 CBY3A6NI87 242 aa9.48□□□□□ -0.89
TMEM170A-205ENST00000568559 CRXO43186 299 aaPredicted RBP9.48□□□□□ -0.89
TMEM170A-205ENST00000568559 CTSGP08311 255 aa9.48□□□□□ -0.89
TMEM170A-205ENST00000568559 Q6YL49 198 aa9.48□□□□□ -0.89
TMEM170A-205ENST00000568559 CD5LO43866 347 aa9.47□□□□□ -0.89
TMEM170A-205ENST00000568559 CD7P09564 240 aa9.47□□□□□ -0.89
TMEM170A-205ENST00000568559 ACTL10Q5JWF8 245 aa9.47□□□□□ -0.89
TMEM170A-205ENST00000568559 PRSS46E5RG02 174 aa9.47□□□□□ -0.89
TMEM170A-205ENST00000568559 TRGC1P0CF51 173 aa9.47□□□□□ -0.89
TMEM170A-205ENST00000568559 ERCC8Q13216 396 aa9.47□□□□□ -0.89
TMEM170A-205ENST00000568559 COTL1Q14019 142 aa9.47□□□□□ -0.89
TMEM170A-205ENST00000568559 SAPCD1Q5SSQ6 148 aa9.47□□□□□ -0.89
TMEM170A-205ENST00000568559 FMC1Q96HJ9 113 aa9.47□□□□□ -0.89
TMEM170A-205ENST00000568559 EVI2AP22794 236 aa9.47□□□□□ -0.89
TMEM170A-205ENST00000568559 RNF151Q2KHN1 245 aa9.47□□□□□ -0.89
TMEM170A-205ENST00000568559 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms