RNA–Protein interactions for RNA: ENST00000568454.5

TSC2-222, Transcript of TSC complex subunit 2, human

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TSC2-222	ENST00000568454	TMEM219	Q86XT9	240 aa		13.39	□□□□□ -0.27
TSC2-222	ENST00000568454	SPANXC	Q9NY87	97 aa		13.39	□□□□□ -0.27
TSC2-222	ENST00000568454	CDKN1B	P46527	198 aa		13.38	□□□□□ -0.27
TSC2-222	ENST00000568454	C3orf36	Q3SXR2	165 aa		13.38	□□□□□ -0.27
TSC2-222	ENST00000568454	NDUFA4L2	Q9NRX3	87 aa		13.38	□□□□□ -0.27
TSC2-222	ENST00000568454	AZU1	P20160	251 aa		13.38	□□□□□ -0.27
TSC2-222	ENST00000568454	LMO1	P25800	156 aa		13.38	□□□□□ -0.27
TSC2-222	ENST00000568454	SPACA3	Q8IXA5	215 aa		13.38	□□□□□ -0.27
TSC2-222	ENST00000568454	KLF2	Q9Y5W3	355 aa	Predicted RBP	13.38	□□□□□ -0.27
TSC2-222	ENST00000568454	INS-IGF2	F8WCM5	200 aa		13.38	□□□□□ -0.27
TSC2-222	ENST00000568454	RHOD	O00212	210 aa		13.38	□□□□□ -0.27
TSC2-222	ENST00000568454	SS18	Q15532	418 aa		13.38	□□□□□ -0.27
TSC2-222	ENST00000568454	ZNF114	Q8NC26	417 aa		13.38	□□□□□ -0.27
TSC2-222	ENST00000568454	C8orf49	Q96NF6	230 aa		13.38	□□□□□ -0.27
TSC2-222	ENST00000568454	HLA-DRB4	P13762	266 aa		13.38	□□□□□ -0.27
TSC2-222	ENST00000568454	HLA-DRB4	X5D2U9	266 aa		13.38	□□□□□ -0.27
TSC2-222	ENST00000568454	EFNA4	P52798	201 aa		13.37	□□□□□ -0.27
TSC2-222	ENST00000568454	SIGLEC8	Q9NYZ4	499 aa		13.37	□□□□□ -0.27
TSC2-222	ENST00000568454	BOD1L2	Q8IYS8	172 aa		13.37	□□□□□ -0.27
TSC2-222	ENST00000568454	KIR2DL5B	A0A0G2JN68	375 aa		13.37	□□□□□ -0.27
TSC2-222	ENST00000568454	KIR2DL5B	A0A0G2JPC4	375 aa		13.37	□□□□□ -0.27
TSC2-222	ENST00000568454	KIR2DL5A	Q8N109	375 aa		13.37	□□□□□ -0.27
TSC2-222	ENST00000568454	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	13.37	□□□□□ -0.27
TSC2-222	ENST00000568454	UBL5	Q9BZL1	73 aa		13.37	□□□□□ -0.27
TSC2-222	ENST00000568454	TMEM14C	Q9P0S9	112 aa		13.37	□□□□□ -0.27
TSC2-222	ENST00000568454		F8VRH5	84 aa		13.36	□□□□□ -0.27
TSC2-222	ENST00000568454	HS3ST6	Q96QI5	342 aa		13.36	□□□□□ -0.27
TSC2-222	ENST00000568454	CDK2AP2	O75956	126 aa		13.36	□□□□□ -0.27
TSC2-222	ENST00000568454	C1QTNF4	Q9BXJ3	329 aa		13.36	□□□□□ -0.27
TSC2-222	ENST00000568454	DAZ1	Q9NQZ3	744 aa	Known RBP	13.36	□□□□□ -0.27
TSC2-222	ENST00000568454	TRAC	P01848	142 aa		13.36	□□□□□ -0.27
TSC2-222	ENST00000568454	LYPD6B	Q8NI32	183 aa		13.36	□□□□□ -0.27
TSC2-222	ENST00000568454	IGKV1-39	P01597	117 aa		13.36	□□□□□ -0.27
TSC2-222	ENST00000568454	IGHV3-53	P01767	116 aa		13.36	□□□□□ -0.27
TSC2-222	ENST00000568454	IGKV1D-39	P04432	117 aa		13.36	□□□□□ -0.27
TSC2-222	ENST00000568454	IGLC7	A0M8Q6	106 aa		13.35	□□□□□ -0.27
TSC2-222	ENST00000568454		I3L3M4	83 aa		13.35	□□□□□ -0.27
TSC2-222	ENST00000568454	MRPL35	Q9NZE8	188 aa	Known RBP	13.35	□□□□□ -0.27
TSC2-222	ENST00000568454	IL17REL	Q6ZVW7	336 aa		13.35	□□□□□ -0.27
TSC2-222	ENST00000568454		H3BMG7	143 aa		13.35	□□□□□ -0.27
TSC2-222	ENST00000568454	DSCR9	P59020	149 aa		13.35	□□□□□ -0.27
TSC2-222	ENST00000568454	HLA-DMB	P28068	263 aa		13.35	□□□□□ -0.27
TSC2-222	ENST00000568454	COA6	Q5JTJ3	125 aa	Known RBP	13.35	□□□□□ -0.27
TSC2-222	ENST00000568454	MORN5	Q5VZ52	161 aa		13.34	□□□□□ -0.27
TSC2-222	ENST00000568454	CEP250	Q9BV73	2442 aa		13.34	□□□□□ -0.27
TSC2-222	ENST00000568454	GAGE12J	A6NER3	117 aa		13.34	□□□□□ -0.27
TSC2-222	ENST00000568454	GAGE7	O76087	117 aa		13.34	□□□□□ -0.27
TSC2-222	ENST00000568454	GAGE12F	P0CL80	117 aa		13.34	□□□□□ -0.27
TSC2-222	ENST00000568454	GAGE12G	P0CL81	117 aa		13.34	□□□□□ -0.27
TSC2-222	ENST00000568454	GAGE12I	P0CL82	117 aa		13.34	□□□□□ -0.27
TSC2-222	ENST00000568454	GAGE4	Q13068	117 aa		13.34	□□□□□ -0.27
TSC2-222	ENST00000568454	MDS2	Q8NDY4	140 aa		13.34	□□□□□ -0.27
TSC2-222	ENST00000568454	PRR25	Q96S07	402 aa		13.34	□□□□□ -0.27
TSC2-222	ENST00000568454	TET1	Q8NFU7	2136 aa		13.34	□□□□□ -0.27
TSC2-222	ENST00000568454		Q0VFX4	171 aa		13.34	□□□□□ -0.27
TSC2-222	ENST00000568454		H3BUX3	64 aa		13.34	□□□□□ -0.27
TSC2-222	ENST00000568454	VWC2	Q2TAL6	325 aa		13.34	□□□□□ -0.27
TSC2-222	ENST00000568454	MBD3L4	A6NDZ8	208 aa	Predicted RBP	13.33	□□□□□ -0.28
TSC2-222	ENST00000568454	MBD3L3	A6NE82	208 aa	Predicted RBP	13.33	□□□□□ -0.28
TSC2-222	ENST00000568454	MBD3L5	A6NJ08	208 aa	Predicted RBP	13.33	□□□□□ -0.28
TSC2-222	ENST00000568454	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	13.33	□□□□□ -0.28
TSC2-222	ENST00000568454	IL15RA	Q13261	267 aa		13.33	□□□□□ -0.28
TSC2-222	ENST00000568454	FAM110D	Q8TAY7	271 aa	Predicted RBP	13.33	□□□□□ -0.28
TSC2-222	ENST00000568454	SMIM2	Q9BVW6	85 aa		13.33	□□□□□ -0.28
TSC2-222	ENST00000568454	HAPLN4	Q86UW8	402 aa		13.33	□□□□□ -0.28
TSC2-222	ENST00000568454	WIPF2	Q8TF74	440 aa	Predicted RBP	13.32	□□□□□ -0.28
TSC2-222	ENST00000568454	NDUFA12	Q9UI09	145 aa		13.32	□□□□□ -0.28
TSC2-222	ENST00000568454	SDHAF1	A6NFY7	115 aa		13.32	□□□□□ -0.28
TSC2-222	ENST00000568454	ETV2	O00321	342 aa	Predicted RBP	13.32	□□□□□ -0.28
TSC2-222	ENST00000568454	SAP30	O75446	220 aa		13.32	□□□□□ -0.28
TSC2-222	ENST00000568454	NPY	P01303	97 aa		13.32	□□□□□ -0.28
TSC2-222	ENST00000568454	KLF5	Q13887	457 aa	Predicted RBP	13.32	□□□□□ -0.28
TSC2-222	ENST00000568454	DOCK6	Q96HP0	2047 aa		13.32	□□□□□ -0.28
TSC2-222	ENST00000568454	CARD19	Q96LW7	228 aa		13.32	□□□□□ -0.28
TSC2-222	ENST00000568454	C12orf74	Q32Q52	190 aa		13.32	□□□□□ -0.28
TSC2-222	ENST00000568454	PIP4P2	Q8N4L2	257 aa		13.32	□□□□□ -0.28
TSC2-222	ENST00000568454	DEFB125	Q8N687	156 aa		13.32	□□□□□ -0.28
TSC2-222	ENST00000568454	PYGO2	Q9BRQ0	406 aa		13.32	□□□□□ -0.28
TSC2-222	ENST00000568454	PRDM6	Q9NQX0	595 aa		13.32	□□□□□ -0.28
TSC2-222	ENST00000568454	LYPD2	Q6UXB3	125 aa		13.31	□□□□□ -0.28
TSC2-222	ENST00000568454	ZNF833P	Q6ZTB9	187 aa		13.31	□□□□□ -0.28
TSC2-222	ENST00000568454		K7ERJ3	54 aa		13.31	□□□□□ -0.28
TSC2-222	ENST00000568454	RBMY1F	Q15415	496 aa	Known RBP	13.31	□□□□□ -0.28
TSC2-222	ENST00000568454		H3BRN7	92 aa		13.31	□□□□□ -0.28
TSC2-222	ENST00000568454	CSRP1	P21291	193 aa	Known RBP	13.3	□□□□□ -0.28
TSC2-222	ENST00000568454	ABCA7	Q8IZY2	2146 aa		13.3	□□□□□ -0.28
TSC2-222	ENST00000568454	OVOL3	O00110	214 aa		13.3	□□□□□ -0.28
TSC2-222	ENST00000568454	NDUFS7	O75251	213 aa		13.3	□□□□□ -0.28
TSC2-222	ENST00000568454	DKK1	O94907	266 aa		13.3	□□□□□ -0.28
TSC2-222	ENST00000568454	ANKRD29	Q8N6D5	301 aa		13.3	□□□□□ -0.28
TSC2-222	ENST00000568454	CITED2	Q99967	270 aa	Predicted RBP	13.3	□□□□□ -0.28
TSC2-222	ENST00000568454	IGHG3	P01860	377 aa		13.3	□□□□□ -0.28
TSC2-222	ENST00000568454	IGHG4	P01861	327 aa		13.3	□□□□□ -0.28
TSC2-222	ENST00000568454	C20orf78	Q9BR46	151 aa		13.29	□□□□□ -0.28
TSC2-222	ENST00000568454		J3QQQ9	107 aa		13.29	□□□□□ -0.28
TSC2-222	ENST00000568454	ZNF747	Q9BV97	191 aa		13.29	□□□□□ -0.28
TSC2-222	ENST00000568454	IGHV2-70D	A0A0C4DH43	119 aa		13.29	□□□□□ -0.28
TSC2-222	ENST00000568454	GAGE5	Q13069	117 aa		13.28	□□□□□ -0.28
TSC2-222	ENST00000568454	GAGE6	Q13070	117 aa		13.28	□□□□□ -0.28
TSC2-222	ENST00000568454	AMTN	Q6UX39	209 aa		13.28	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms