RNA–Protein interactions for RNA: ENST00000568232.1

CLK3-222, Transcript of CDC like kinase 3, humanhuman

Gene CLK3, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-222ENST00000568232 ASB13Q8WXK3 278 aa7.85□□□□□ -1.15
CLK3-222ENST00000568232 MED28Q9H204 178 aa7.85□□□□□ -1.15
CLK3-222ENST00000568232 IGKV1OR2-108A0A075B7D4 117 aa7.84□□□□□ -1.15
CLK3-222ENST00000568232 ZNF324O75467 553 aaPredicted RBP7.84□□□□□ -1.15
CLK3-222ENST00000568232 IL5P05113 134 aa7.84□□□□□ -1.15
CLK3-222ENST00000568232 AKAIN1P0CW23 69 aa7.84□□□□□ -1.15
CLK3-222ENST00000568232 EVI2AP22794 236 aa7.84□□□□□ -1.15
CLK3-222ENST00000568232 NDUFA5Q16718 116 aa7.84□□□□□ -1.15
CLK3-222ENST00000568232 NOXA1Q86UR1 476 aa7.84□□□□□ -1.15
CLK3-222ENST00000568232 TMEM229BQ8NBD8 167 aa7.84□□□□□ -1.15
CLK3-222ENST00000568232 OR1B1Q8NGR6 318 aa7.84□□□□□ -1.15
CLK3-222ENST00000568232 ZNF486Q96H40 463 aaPredicted RBP7.84□□□□□ -1.15
CLK3-222ENST00000568232 SLC25A21Q9BQT8 299 aaPredicted RBP7.84□□□□□ -1.15
CLK3-222ENST00000568232 NUDT15Q9NV35 164 aa7.84□□□□□ -1.15
CLK3-222ENST00000568232 ALG5Q9Y673 324 aa7.84□□□□□ -1.15
CLK3-222ENST00000568232 FABP1P07148 127 aa7.83□□□□□ -1.16
CLK3-222ENST00000568232 CRYGDP07320 174 aa7.83□□□□□ -1.16
CLK3-222ENST00000568232 GATA2P23769 480 aaPredicted RBP7.83□□□□□ -1.16
CLK3-222ENST00000568232 ASIPP42127 132 aa7.83□□□□□ -1.16
CLK3-222ENST00000568232 PSG3Q16557 428 aa7.83□□□□□ -1.16
CLK3-222ENST00000568232 GFI1BQ5VTD9 330 aa7.83□□□□□ -1.16
CLK3-222ENST00000568232 FAAP20Q6NZ36 180 aa7.83□□□□□ -1.16
CLK3-222ENST00000568232 SCXQ7RTU7 201 aa7.83□□□□□ -1.16
CLK3-222ENST00000568232 FAM219AQ8IW50 185 aa7.83□□□□□ -1.16
CLK3-222ENST00000568232 OR4D10Q8NGI6 311 aa7.83□□□□□ -1.16
CLK3-222ENST00000568232 OR4D5Q8NGN0 318 aa7.83□□□□□ -1.16
CLK3-222ENST00000568232 ST6GAL2Q96JF0 529 aa7.83□□□□□ -1.16
CLK3-222ENST00000568232 SLC35E1Q96K37 410 aa7.83□□□□□ -1.16
CLK3-222ENST00000568232 HYLS1Q96M11 299 aa7.83□□□□□ -1.16
CLK3-222ENST00000568232 SCP2D1Q9UJQ7 156 aa7.83□□□□□ -1.16
CLK3-222ENST00000568232 J3KRW8 73 aa7.82□□□□□ -1.16
CLK3-222ENST00000568232 NDUFB6O95139 128 aa7.82□□□□□ -1.16
CLK3-222ENST00000568232 CDS2O95674 445 aa7.82□□□□□ -1.16
CLK3-222ENST00000568232 IGHV3-53P01767 116 aa7.82□□□□□ -1.16
CLK3-222ENST00000568232 ORM2P19652 201 aa7.82□□□□□ -1.16
CLK3-222ENST00000568232 CXCL3P19876 107 aa7.82□□□□□ -1.16
CLK3-222ENST00000568232 BTCP35070 178 aa7.82□□□□□ -1.16
CLK3-222ENST00000568232 GPX4P36969 197 aaPredicted RBP7.82□□□□□ -1.16
CLK3-222ENST00000568232 DAZ2Q13117 558 aaKnown RBP7.82□□□□□ -1.16
CLK3-222ENST00000568232 LINC01620Q4KN68 170 aa7.82□□□□□ -1.16
CLK3-222ENST00000568232 TMEM182Q6ZP80 229 aaPredicted RBP7.82□□□□□ -1.16
CLK3-222ENST00000568232 LHFPL1Q86WI0 220 aa7.82□□□□□ -1.16
CLK3-222ENST00000568232 SELENOHQ8IZQ5 122 aaKnown RBP7.82□□□□□ -1.16
CLK3-222ENST00000568232 LGI3Q8N145 548 aa7.82□□□□□ -1.16
CLK3-222ENST00000568232 SVIPQ8NHG7 77 aa7.82□□□□□ -1.16
CLK3-222ENST00000568232 TRGV9Q99603 122 aa7.82□□□□□ -1.16
CLK3-222ENST00000568232 C20orf144Q9BQM9 153 aa7.82□□□□□ -1.16
CLK3-222ENST00000568232 TMEM222Q9H0R3 208 aa7.82□□□□□ -1.16
CLK3-222ENST00000568232 GSN-AS1Q9NRJ2 163 aa7.82□□□□□ -1.16
CLK3-222ENST00000568232 FUT9Q9Y231 359 aa7.82□□□□□ -1.16
CLK3-222ENST00000568232 U3KQ87 197 aa7.82□□□□□ -1.16
CLK3-222ENST00000568232 TRGV1A0A0A0MS02 117 aa7.81□□□□□ -1.16
CLK3-222ENST00000568232 DISC1C4P0D8 188 aa7.81□□□□□ -1.16
CLK3-222ENST00000568232 CD3DP04234 171 aa7.81□□□□□ -1.16
CLK3-222ENST00000568232 ANXA3P12429 323 aa7.81□□□□□ -1.16
CLK3-222ENST00000568232 NEGR1Q7Z3B1 354 aa7.81□□□□□ -1.16
CLK3-222ENST00000568232 GLYATL2Q8WU03 294 aa7.81□□□□□ -1.16
CLK3-222ENST00000568232 RPUSD4Q96CM3 377 aaKnown RBP7.81□□□□□ -1.16
CLK3-222ENST00000568232 SCGB3A2Q96PL1 93 aa7.81□□□□□ -1.16
CLK3-222ENST00000568232 PRRT1Q99946 306 aa7.81□□□□□ -1.16
CLK3-222ENST00000568232 C20orf85Q9H1P6 137 aa7.81□□□□□ -1.16
CLK3-222ENST00000568232 TNXBP22105 4242 aa7.8□□□□□ -1.16
CLK3-222ENST00000568232 TRAV6A0A075B6T7 132 aa7.8□□□□□ -1.16
CLK3-222ENST00000568232 TRAV12-3A0A0B4J271 114 aa7.8□□□□□ -1.16
CLK3-222ENST00000568232 FAM25EA8MYX2 175 aa7.8□□□□□ -1.16
CLK3-222ENST00000568232 K7EP13 123 aa7.8□□□□□ -1.16
CLK3-222ENST00000568232 SSNA1O43805 119 aa7.8□□□□□ -1.16
CLK3-222ENST00000568232 MT1HL1P0DM35 61 aa7.8□□□□□ -1.16
CLK3-222ENST00000568232 HNRNPA3P51991 378 aaKnown RBP7.8□□□□□ -1.16
CLK3-222ENST00000568232 CRYBA4P53673 196 aa7.8□□□□□ -1.16
CLK3-222ENST00000568232 WFDC2Q14508 124 aa7.8□□□□□ -1.16
CLK3-222ENST00000568232 MRPL23Q16540 153 aaKnown RBP7.8□□□□□ -1.16
CLK3-222ENST00000568232 STEAP1BQ6NZ63 245 aa7.8□□□□□ -1.16
CLK3-222ENST00000568232 CCDC71LQ8N9Z2 235 aa7.8□□□□□ -1.16
CLK3-222ENST00000568232 OR13C8Q8NGS7 320 aa7.8□□□□□ -1.16
CLK3-222ENST00000568232 DTD1Q8TEA8 209 aa7.8□□□□□ -1.16
CLK3-222ENST00000568232 RBPMSQ93062 196 aaKnown RBP7.8□□□□□ -1.16
CLK3-222ENST00000568232 C8orf49Q96NF6 230 aa7.8□□□□□ -1.16
CLK3-222ENST00000568232 GPR82Q96P67 336 aa7.8□□□□□ -1.16
CLK3-222ENST00000568232 RBKSQ9H477 322 aa7.8□□□□□ -1.16
CLK3-222ENST00000568232 RGS13O14921 159 aa7.79□□□□□ -1.16
CLK3-222ENST00000568232 RAB3DO95716 219 aa7.79□□□□□ -1.16
CLK3-222ENST00000568232 TMEM268Q5VZI3 342 aa7.79□□□□□ -1.16
CLK3-222ENST00000568232 THAP8Q8NA92 274 aa7.79□□□□□ -1.16
CLK3-222ENST00000568232 C11orf72Q8NBR9 251 aa7.79□□□□□ -1.16
CLK3-222ENST00000568232 MARCH1Q8TCQ1 289 aa7.79□□□□□ -1.16
CLK3-222ENST00000568232 TMEM147Q9BVK8 224 aa7.79□□□□□ -1.16
CLK3-222ENST00000568232 Q9HAA7 133 aa7.79□□□□□ -1.16
CLK3-222ENST00000568232 PRO0255Q9UI72 69 aa7.79□□□□□ -1.16
CLK3-222ENST00000568232 SLC45A2Q9UMX9 530 aa7.79□□□□□ -1.16
CLK3-222ENST00000568232 HHLA3Q9XRX5 114 aa7.79□□□□□ -1.16
CLK3-222ENST00000568232 RCL1Q9Y2P8 373 aaKnown RBP7.79□□□□□ -1.16
CLK3-222ENST00000568232 KLF12Q9Y4X4 402 aa7.79□□□□□ -1.16
CLK3-222ENST00000568232 TMEM56-RWDD3S4R434 201 aa7.79□□□□□ -1.16
CLK3-222ENST00000568232 TEX13DA0A0J9YY54 714 aaPredicted RBP7.78□□□□□ -1.16
CLK3-222ENST00000568232 PRAC2D3DTV9 90 aa7.78□□□□□ -1.16
CLK3-222ENST00000568232 E5RGE8 158 aa7.78□□□□□ -1.16
CLK3-222ENST00000568232 H3BRN7 92 aa7.78□□□□□ -1.16
CLK3-222ENST00000568232 SNRPCP09234 159 aaKnown RBP7.78□□□□□ -1.16
CLK3-222ENST00000568232 SULT1A3P0DMM9 295 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms